RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Crocc2F6XLV1 1638 aa31.99■■■□□ 2.71
Ccdc9-201ENSMUST00000041010 AqrQ8CFQ3 1481 aaKnown RBP31.93■■■□□ 2.7
Ccdc9-201ENSMUST00000041010 Samd9lQ69Z37 1561 aa31.89■■■□□ 2.69
Ccdc9-201ENSMUST00000041010 Myt1lP97500 1187 aa31.88■■■□□ 2.69
Ccdc9-201ENSMUST00000041010 SynmQ70IV5 1561 aa31.8■■■□□ 2.68
Ccdc9-201ENSMUST00000041010 Clip1Q922J3 1391 aa31.79■■■□□ 2.68
Ccdc9-201ENSMUST00000041010 UbtfP25976 765 aaKnown RBP31.79■■■□□ 2.68
Ccdc9-201ENSMUST00000041010 Gm38655A0A286YDK6 273 aa31.78■■■□□ 2.68
Ccdc9-201ENSMUST00000041010 DiexfQ8BTT6 772 aaKnown RBP31.74■■■□□ 2.67
Ccdc9-201ENSMUST00000041010 Carmil1Q6EDY6 1374 aa31.7■■■□□ 2.67
Ccdc9-201ENSMUST00000041010 TonslQ6NZL6 1363 aa31.66■■■□□ 2.66
Ccdc9-201ENSMUST00000041010 Eea1Q8BL66 1411 aa31.66■■■□□ 2.66
Ccdc9-201ENSMUST00000041010 Erich3F6QRE9 1637 aa31.65■■■□□ 2.66
Ccdc9-201ENSMUST00000041010 Ppargc1bQ8VHJ7 1014 aa31.64■■■□□ 2.66
Ccdc9-201ENSMUST00000041010 Plb1Q3TTY0 1478 aa31.63■■■□□ 2.65
Ccdc9-201ENSMUST00000041010 Urb2E9Q7L1 1524 aaKnown RBP31.63■■■□□ 2.65
Ccdc9-201ENSMUST00000041010 Lrriq1Q0P5X1 1673 aa31.6■■■□□ 2.65
Ccdc9-201ENSMUST00000041010 Polr1aO35134 1717 aaKnown RBP31.58■■■□□ 2.65
Ccdc9-201ENSMUST00000041010 Ankrd26Q811D2 1581 aa31.58■■■□□ 2.65
Ccdc9-201ENSMUST00000041010 Pbrm1Q8BSQ9 1634 aaKnown RBP31.55■■■□□ 2.64
Ccdc9-201ENSMUST00000041010 Rad54l2Q99NG0 1466 aa31.55■■■□□ 2.64
Ccdc9-201ENSMUST00000041010 Gpatch8A2A6A1 1505 aa31.54■■■□□ 2.64
Ccdc9-201ENSMUST00000041010 Ift140E9PY46 1464 aa31.52■■■□□ 2.64
Ccdc9-201ENSMUST00000041010 Arap1Q4LDD4 1452 aa31.5■■■□□ 2.63
Ccdc9-201ENSMUST00000041010 Setd5Q5XJV7 1441 aa31.5■■■□□ 2.63
Ccdc9-201ENSMUST00000041010 Magi3Q9EQJ9 1476 aa31.5■■■□□ 2.63
Ccdc9-201ENSMUST00000041010 Bcl11aQ9QYE3 773 aa31.5■■■□□ 2.63
Ccdc9-201ENSMUST00000041010 Arhgef5E9Q7D5 1581 aa31.47■■■□□ 2.63
Ccdc9-201ENSMUST00000041010 Disp1Q3TDN0 1521 aa31.47■■■□□ 2.63
Ccdc9-201ENSMUST00000041010 Pla2r1Q62028 1487 aa31.47■■■□□ 2.63
Ccdc9-201ENSMUST00000041010 Cux1P53564 1515 aa31.45■■■□□ 2.62
Ccdc9-201ENSMUST00000041010 Rpap1Q80TE0 1409 aa31.44■■■□□ 2.62
Ccdc9-201ENSMUST00000041010 Fam71e1A1L3C1 212 aa31.44■■■□□ 2.62
Ccdc9-201ENSMUST00000041010 Grin2aP35436 1464 aa31.43■■■□□ 2.62
Ccdc9-201ENSMUST00000041010 Tnnt3Q9QZ47 272 aa31.42■■■□□ 2.62
Ccdc9-201ENSMUST00000041010 Setd1bQ8CFT2 1985 aa31.41■■■□□ 2.62
Ccdc9-201ENSMUST00000041010 Lmo7E9PYF4 1699 aaKnown RBP31.4■■■□□ 2.62
Ccdc9-201ENSMUST00000041010 Fyco1Q8VDC1 1437 aa31.38■■■□□ 2.61
Ccdc9-201ENSMUST00000041010 EprsQ8CGC7 1512 aaKnown RBP31.34■■■□□ 2.61
Ccdc9-201ENSMUST00000041010 Nup160Q9Z0W3 1402 aaKnown RBP31.34■■■□□ 2.61
Ccdc9-201ENSMUST00000041010 Pcf11G3X9Z4 1553 aa31.33■■■□□ 2.61
Ccdc9-201ENSMUST00000041010 Tiam1Q60610 1591 aa31.31■■■□□ 2.6
Ccdc9-201ENSMUST00000041010 Hnrnpul2Q00PI9 745 aaKnown RBP31.29■■■□□ 2.6
Ccdc9-201ENSMUST00000041010 Adamts12Q811B3 1600 aa31.28■■■□□ 2.6
Ccdc9-201ENSMUST00000041010 Abca5Q8K448 1642 aa31.23■■■□□ 2.59
Ccdc9-201ENSMUST00000041010 SafbD3YXK2 937 aaKnown RBP31.21■■■□□ 2.59
Ccdc9-201ENSMUST00000041010 Peg3Q3URU2 1571 aa31.2■■■□□ 2.59
Ccdc9-201ENSMUST00000041010 Eif4g3Q80XI3 1579 aaKnown RBP31.19■■■□□ 2.58
Ccdc9-201ENSMUST00000041010 Ncapd3Q6ZQK0 1506 aa31.19■■■□□ 2.58
Ccdc9-201ENSMUST00000041010 Cc2d2bA0A286YDU8 1405 aa31.19■■■□□ 2.58
Ccdc9-201ENSMUST00000041010 WizO88286 1684 aaKnown RBP31.17■■■□□ 2.58
Ccdc9-201ENSMUST00000041010 CntlnA2AM05 1397 aa31.15■■■□□ 2.58
Ccdc9-201ENSMUST00000041010 Mapk8ip2Q9ERE9 830 aa31.15■■■□□ 2.58
Ccdc9-201ENSMUST00000041010 TchhA0A0B4J1F9 1599 aa31.15■■■□□ 2.58
Ccdc9-201ENSMUST00000041010 Naip1Q9QWK5 1403 aa31.14■■■□□ 2.58
Ccdc9-201ENSMUST00000041010 CadpsQ80TJ1 1355 aa31.14■■■□□ 2.58
Ccdc9-201ENSMUST00000041010 Plekhg3Q4VAC9 1341 aa31.13■■■□□ 2.57
Ccdc9-201ENSMUST00000041010 Rusc2Q80U22 1514 aa31.11■■■□□ 2.57
Ccdc9-201ENSMUST00000041010 Gm7298A0A0N4SVU1 1476 aa31.11■■■□□ 2.57
Ccdc9-201ENSMUST00000041010 Abca16E9PWJ7 1678 aa31.11■■■□□ 2.57
Ccdc9-201ENSMUST00000041010 Slx4Q6P1D7 1565 aa31.1■■■□□ 2.57
Ccdc9-201ENSMUST00000041010 Ap3b1Q9Z1T1 1105 aa31.07■■■□□ 2.56
Ccdc9-201ENSMUST00000041010 BlmO88700 1416 aa31.05■■■□□ 2.56
Ccdc9-201ENSMUST00000041010 Soga1E1U8D0 1418 aa31.05■■■□□ 2.56
Ccdc9-201ENSMUST00000041010 Aebp1Q640N1 1128 aa30.99■■■□□ 2.55
Ccdc9-201ENSMUST00000041010 PxdnQ3UQ28 1475 aa30.98■■■□□ 2.55
Ccdc9-201ENSMUST00000041010 Anp32aO35381 247 aa30.94■■■□□ 2.54
Ccdc9-201ENSMUST00000041010 Abcc2Q8VI47 1543 aa30.88■■■□□ 2.53
Ccdc9-201ENSMUST00000041010 Gm1043A0A140LJC2 1431 aa30.85■■■□□ 2.53
Ccdc9-201ENSMUST00000041010 Kdm5bQ80Y84 1544 aa30.84■■■□□ 2.53
Ccdc9-201ENSMUST00000041010 Rtl5Q5DTT4 599 aa30.81■■■□□ 2.52
Ccdc9-201ENSMUST00000041010 Znf710Q3U288 666 aa30.79■■■□□ 2.52
Ccdc9-201ENSMUST00000041010 Map3k4O08648 1597 aa30.77■■■□□ 2.52
Ccdc9-201ENSMUST00000041010 Kif27Q7M6Z4 1394 aa30.75■■■□□ 2.51
Ccdc9-201ENSMUST00000041010 Shroom2A2ALU4 1481 aa30.75■■■□□ 2.51
Ccdc9-201ENSMUST00000041010 Stra8P70278 393 aa30.72■■■□□ 2.51
Ccdc9-201ENSMUST00000041010 Dnmt1P13864 1620 aaKnown RBP30.71■■■□□ 2.51
Ccdc9-201ENSMUST00000041010 WrnO09053 1401 aa30.7■■■□□ 2.51
Ccdc9-201ENSMUST00000041010 Rapgef6Q5NCJ1 1609 aa30.67■■■□□ 2.5
Ccdc9-201ENSMUST00000041010 Arhgap27A2AB59 869 aa30.66■■■□□ 2.5
Ccdc9-201ENSMUST00000041010 Lmtk2Q3TYD6 1471 aa30.65■■■□□ 2.5
Ccdc9-201ENSMUST00000041010 Lmod2Q3UHZ5 550 aa30.63■■■□□ 2.49
Ccdc9-201ENSMUST00000041010 Gcc2Q8CHG3 1679 aa30.61■■■□□ 2.49
Ccdc9-201ENSMUST00000041010 BC005561E9Q5E2 1589 aa30.6■■■□□ 2.49
Ccdc9-201ENSMUST00000041010 Eid3Q3V124 375 aa30.58■■■□□ 2.49
Ccdc9-201ENSMUST00000041010 Ifnlr1Q8CGK5 535 aa30.58■■■□□ 2.49
Ccdc9-201ENSMUST00000041010 Fgd6Q69ZL1 1399 aa30.57■■■□□ 2.49
Ccdc9-201ENSMUST00000041010 PrkcshO08795 521 aa30.53■■■□□ 2.48
Ccdc9-201ENSMUST00000041010 3425401B19RikD3Z1D3 1412 aa30.52■■■□□ 2.48
Ccdc9-201ENSMUST00000041010 Nolc1E9Q5C9 702 aaKnown RBP30.51■■■□□ 2.47
Ccdc9-201ENSMUST00000041010 NexmifQ5DTT1 1515 aa30.51■■■□□ 2.47
Ccdc9-201ENSMUST00000041010 Arhgef11Q68FM7 1552 aa30.5■■■□□ 2.47
Ccdc9-201ENSMUST00000041010 Rrbp1Q99PL5 1605 aaKnown RBP30.5■■■□□ 2.47
Ccdc9-201ENSMUST00000041010 Zcchc11B2RX14 1644 aaKnown RBP30.49■■■□□ 2.47
Ccdc9-201ENSMUST00000041010 Pelp1Q9DBD5 1123 aaKnown RBP30.49■■■□□ 2.47
Ccdc9-201ENSMUST00000041010 Ncoa2Q61026 1462 aa30.47■■■□□ 2.47
Ccdc9-201ENSMUST00000041010 Calr4Q3TQS0 420 aa30.47■■■□□ 2.47
Ccdc9-201ENSMUST00000041010 Mug1P28665 1476 aa30.46■■■□□ 2.47
Ccdc9-201ENSMUST00000041010 Neo1P97798 1493 aa30.45■■■□□ 2.47
Ccdc9-201ENSMUST00000041010 Ccnb3Q810T2 1396 aa30.44■■■□□ 2.46
Retrieved 100 of 22,080 RNA–protein pairs in 103.4 ms