RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Rad54l2Q99NG0 1466 aa34.89■■■■□ 3.18
Cln6-201ENSMUST00000034776 Tiam1Q60610 1591 aa34.85■■■■□ 3.17
Cln6-201ENSMUST00000034776 Ap3b1Q9Z1T1 1105 aa34.85■■■■□ 3.17
Cln6-201ENSMUST00000034776 Lmo7E9PYF4 1699 aaKnown RBP34.82■■■■□ 3.17
Cln6-201ENSMUST00000034776 Pcf11G3X9Z4 1553 aa34.8■■■■□ 3.16
Cln6-201ENSMUST00000034776 Polr1aO35134 1717 aaKnown RBP34.79■■■■□ 3.16
Cln6-201ENSMUST00000034776 Plb1Q3TTY0 1478 aa34.78■■■■□ 3.16
Cln6-201ENSMUST00000034776 Urb2E9Q7L1 1524 aaKnown RBP34.77■■■■□ 3.16
Cln6-201ENSMUST00000034776 Naip1Q9QWK5 1403 aa34.77■■■■□ 3.16
Cln6-201ENSMUST00000034776 Rpap1Q80TE0 1409 aa34.74■■■■□ 3.15
Cln6-201ENSMUST00000034776 Fyco1Q8VDC1 1437 aa34.74■■■■□ 3.15
Cln6-201ENSMUST00000034776 Ncapd3Q6ZQK0 1506 aa34.73■■■■□ 3.15
Cln6-201ENSMUST00000034776 Pla2r1Q62028 1487 aa34.71■■■■□ 3.15
Cln6-201ENSMUST00000034776 Magi3Q9EQJ9 1476 aa34.7■■■■□ 3.15
Cln6-201ENSMUST00000034776 Disp1Q3TDN0 1521 aa34.66■■■■□ 3.14
Cln6-201ENSMUST00000034776 CntlnA2AM05 1397 aa34.66■■■■□ 3.14
Cln6-201ENSMUST00000034776 Slx4Q6P1D7 1565 aa34.63■■■■□ 3.13
Cln6-201ENSMUST00000034776 EprsQ8CGC7 1512 aaKnown RBP34.62■■■■□ 3.13
Cln6-201ENSMUST00000034776 Grin2aP35436 1464 aa34.61■■■■□ 3.13
Cln6-201ENSMUST00000034776 BlmO88700 1416 aa34.6■■■■□ 3.13
Cln6-201ENSMUST00000034776 Peg3Q3URU2 1571 aa34.55■■■■□ 3.12
Cln6-201ENSMUST00000034776 Setd1bQ8CFT2 1985 aa34.53■■■■□ 3.12
Cln6-201ENSMUST00000034776 Aebp1Q640N1 1128 aa34.52■■■■□ 3.12
Cln6-201ENSMUST00000034776 Ift140E9PY46 1464 aa34.52■■■■□ 3.12
Cln6-201ENSMUST00000034776 Gpatch8A2A6A1 1505 aa34.48■■■■□ 3.11
Cln6-201ENSMUST00000034776 CadpsQ80TJ1 1355 aa34.47■■■■□ 3.11
Cln6-201ENSMUST00000034776 Lrriq1Q0P5X1 1673 aa34.45■■■■□ 3.11
Cln6-201ENSMUST00000034776 Pbrm1Q8BSQ9 1634 aaKnown RBP34.44■■■■□ 3.1
Cln6-201ENSMUST00000034776 Adamts12Q811B3 1600 aa34.44■■■■□ 3.1
Cln6-201ENSMUST00000034776 Abca5Q8K448 1642 aa34.44■■■■□ 3.1
Cln6-201ENSMUST00000034776 Nup160Q9Z0W3 1402 aaKnown RBP34.41■■■■□ 3.1
Cln6-201ENSMUST00000034776 Gm7298A0A0N4SVU1 1476 aa34.4■■■■□ 3.1
Cln6-201ENSMUST00000034776 WizO88286 1684 aaKnown RBP34.37■■■■□ 3.09
Cln6-201ENSMUST00000034776 Gm1043A0A140LJC2 1431 aa34.34■■■■□ 3.09
Cln6-201ENSMUST00000034776 Pcgf6Q99NA9 353 aa34.33■■■■□ 3.09
Cln6-201ENSMUST00000034776 TchhA0A0B4J1F9 1599 aa34.33■■■■□ 3.09
Cln6-201ENSMUST00000034776 Lmod2Q3UHZ5 550 aa34.3■■■■□ 3.08
Cln6-201ENSMUST00000034776 Soga1E1U8D0 1418 aa34.28■■■■□ 3.08
Cln6-201ENSMUST00000034776 Kdm5bQ80Y84 1544 aa34.28■■■■□ 3.08
Cln6-201ENSMUST00000034776 PxdnQ3UQ28 1475 aa34.22■■■■□ 3.07
Cln6-201ENSMUST00000034776 Abca16E9PWJ7 1678 aa34.21■■■■□ 3.07
Cln6-201ENSMUST00000034776 Cc2d2bA0A286YDU8 1405 aa34.2■■■■□ 3.07
Cln6-201ENSMUST00000034776 3425401B19RikD3Z1D3 1412 aa34.16■■■■□ 3.06
Cln6-201ENSMUST00000034776 Supt5hO55201 1082 aaKnown RBP34.12■■■■□ 3.05
Cln6-201ENSMUST00000034776 Kif27Q7M6Z4 1394 aa34.11■■■■□ 3.05
Cln6-201ENSMUST00000034776 Lmtk2Q3TYD6 1471 aa34.04■■■■□ 3.04
Cln6-201ENSMUST00000034776 Abcc2Q8VI47 1543 aa34.02■■■■□ 3.04
Cln6-201ENSMUST00000034776 WrnO09053 1401 aa33.99■■■■□ 3.03
Cln6-201ENSMUST00000034776 Rusc2Q80U22 1514 aa33.98■■■■□ 3.03
Cln6-201ENSMUST00000034776 Las1lA2BE28 776 aaKnown RBP33.97■■■■□ 3.03
Cln6-201ENSMUST00000034776 Arhgap27A2AB59 869 aa33.94■■■■□ 3.02
Cln6-201ENSMUST00000034776 TonslQ6NZL6 1363 aa33.94■■■■□ 3.02
Cln6-201ENSMUST00000034776 Eif4g3Q80XI3 1579 aaKnown RBP33.92■■■■□ 3.02
Cln6-201ENSMUST00000034776 Shroom2A2ALU4 1481 aa33.92■■■■□ 3.02
Cln6-201ENSMUST00000034776 Ccnb3Q810T2 1396 aa33.92■■■■□ 3.02
Cln6-201ENSMUST00000034776 BC005561E9Q5E2 1589 aa33.89■■■■□ 3.02
Cln6-201ENSMUST00000034776 Fam50aQ9WV03 339 aaKnown RBP33.88■■■■□ 3.01
Cln6-201ENSMUST00000034776 Mia2Q91ZV0 1396 aa33.87■■■■□ 3.01
Cln6-201ENSMUST00000034776 Fhad1A6PWD2 1420 aa33.86■■■■□ 3.01
Cln6-201ENSMUST00000034776 Naip2Q9QUK4 1447 aa33.86■■■■□ 3.01
Cln6-201ENSMUST00000034776 Gcc2Q8CHG3 1679 aa33.86■■■■□ 3.01
Cln6-201ENSMUST00000034776 NexmifQ5DTT1 1515 aa33.85■■■■□ 3.01
Cln6-201ENSMUST00000034776 Rapgef6Q5NCJ1 1609 aa33.85■■■■□ 3.01
Cln6-201ENSMUST00000034776 A2mQ6GQT1 1474 aa33.82■■■■□ 3
Cln6-201ENSMUST00000034776 Mug1P28665 1476 aa33.77■■■■□ 3
Cln6-201ENSMUST00000034776 Vps8Q0P5W1 1427 aa33.77■■■■□ 3
Cln6-201ENSMUST00000034776 Ncoa3O09000 1398 aa33.76■■■□□ 2.99
Cln6-201ENSMUST00000034776 Map3k4O08648 1597 aa33.76■■■□□ 2.99
Cln6-201ENSMUST00000034776 Dnmt1P13864 1620 aaKnown RBP33.7■■■□□ 2.99
Cln6-201ENSMUST00000034776 Arhgef11Q68FM7 1552 aa33.7■■■□□ 2.99
Cln6-201ENSMUST00000034776 Eid3Q3V124 375 aa33.68■■■□□ 2.98
Cln6-201ENSMUST00000034776 Sall2Q9QX96 1004 aa33.68■■■□□ 2.98
Cln6-201ENSMUST00000034776 Ccer2J3QPU5 274 aa33.67■■■□□ 2.98
Cln6-201ENSMUST00000034776 Aebp2Q9Z248 504 aaKnown RBP33.67■■■□□ 2.98
Cln6-201ENSMUST00000034776 Arhgap31A6X8Z5 1425 aa33.64■■■□□ 2.98
Cln6-201ENSMUST00000034776 Cdc42bpaQ3UU96 1719 aa33.62■■■□□ 2.97
Cln6-201ENSMUST00000034776 Kiaa1551Q5DTW7 1521 aa33.6■■■□□ 2.97
Cln6-201ENSMUST00000034776 UacaQ8CGB3 1411 aa33.6■■■□□ 2.97
Cln6-201ENSMUST00000034776 Zcchc11B2RX14 1644 aaKnown RBP33.58■■■□□ 2.97
Cln6-201ENSMUST00000034776 Ncoa2Q61026 1462 aa33.58■■■□□ 2.97
Cln6-201ENSMUST00000034776 Ankrd36D3Z4K0 1415 aa33.55■■■□□ 2.96
Cln6-201ENSMUST00000034776 Dennd4bQ3U1Y4 1499 aa33.55■■■□□ 2.96
Cln6-201ENSMUST00000034776 Fgd6Q69ZL1 1399 aa33.54■■■□□ 2.96
Cln6-201ENSMUST00000034776 Ccdc141E9Q8Q6 1531 aa33.52■■■□□ 2.96
Cln6-201ENSMUST00000034776 Neo1P97798 1493 aa33.52■■■□□ 2.96
Cln6-201ENSMUST00000034776 Magi1Q6RHR9 1471 aa33.5■■■□□ 2.95
Cln6-201ENSMUST00000034776 Dhx57Q6P5D3 1388 aaKnown RBP33.5■■■□□ 2.95
Cln6-201ENSMUST00000034776 Fam163aQ8CAA5 168 aa33.5■■■□□ 2.95
Cln6-201ENSMUST00000034776 Chic2Q9D9G3 165 aa33.5■■■□□ 2.95
Cln6-201ENSMUST00000034776 Mroh2aD3Z750 1679 aa33.5■■■□□ 2.95
Cln6-201ENSMUST00000034776 Jph4Q80WT0 628 aa33.49■■■□□ 2.95
Cln6-201ENSMUST00000034776 Arhgef40Q3UPH7 1517 aa33.48■■■□□ 2.95
Cln6-201ENSMUST00000034776 Wdr66E9Q743 1299 aa33.48■■■□□ 2.95
Cln6-201ENSMUST00000034776 Rfx7F8VPJ6 1459 aa33.46■■■□□ 2.95
Cln6-201ENSMUST00000034776 Mapkbp1Q6NS57 1503 aa33.46■■■□□ 2.95
Cln6-201ENSMUST00000034776 Arhgef12Q8R4H2 1543 aaKnown RBP33.46■■■□□ 2.95
Cln6-201ENSMUST00000034776 Abcc5Q9R1X5 1436 aa33.45■■■□□ 2.95
Cln6-201ENSMUST00000034776 ClspnQ80YR7 1315 aa33.43■■■□□ 2.94
Cln6-201ENSMUST00000034776 Adcy10Q8C0T9 1614 aa33.43■■■□□ 2.94
Cln6-201ENSMUST00000034776 Rrbp1Q99PL5 1605 aaKnown RBP33.43■■■□□ 2.94
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms