RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Zbtb7cQ8VCZ7 619 aa13.74□□□□□ -0.21
Ldlr-201ENSMUST00000034713 Os9Q8K2C7 672 aa13.74□□□□□ -0.21
Ldlr-201ENSMUST00000034713 Ccer2J3QPU5 274 aa13.73□□□□□ -0.21
Ldlr-201ENSMUST00000034713 Cep162Q6ZQ06 1403 aa13.71□□□□□ -0.21
Ldlr-201ENSMUST00000034713 Csrnp3P59055 597 aa13.7□□□□□ -0.22
Ldlr-201ENSMUST00000034713 LrpprcQ6PB66 1392 aaKnown RBP13.69□□□□□ -0.22
Ldlr-201ENSMUST00000034713 Mapk8ip2Q9ERE9 830 aa13.69□□□□□ -0.22
Ldlr-201ENSMUST00000034713 Hdac5Q9Z2V6 1113 aa13.67□□□□□ -0.22
Ldlr-201ENSMUST00000034713 Dhx29Q6PGC1 1365 aaKnown RBP13.63□□□□□ -0.23
Ldlr-201ENSMUST00000034713 4930567H17RikQ3V0K5 233 aa13.62□□□□□ -0.23
Ldlr-201ENSMUST00000034713 Frmpd1A2AKB4 1549 aa13.62□□□□□ -0.23
Ldlr-201ENSMUST00000034713 Gm13697A2AK42 830 aa13.62□□□□□ -0.23
Ldlr-201ENSMUST00000034713 Baz1bQ9Z277 1479 aa13.61□□□□□ -0.23
Ldlr-201ENSMUST00000034713 Chic2Q9D9G3 165 aa13.6□□□□□ -0.23
Ldlr-201ENSMUST00000034713 Clstn2Q9ER65 966 aa13.58□□□□□ -0.24
Ldlr-201ENSMUST00000034713 Carmil1Q6EDY6 1374 aa13.57□□□□□ -0.24
Ldlr-201ENSMUST00000034713 Erich6D3Z6S9 713 aa13.55□□□□□ -0.24
Ldlr-201ENSMUST00000034713 Kif27Q7M6Z4 1394 aa13.53□□□□□ -0.24
Ldlr-201ENSMUST00000034713 Wdr62Q3U3T8 1523 aa13.53□□□□□ -0.24
Ldlr-201ENSMUST00000034713 Rapgef2Q8CHG7 1496 aa13.53□□□□□ -0.24
Ldlr-201ENSMUST00000034713 Aebp1Q640N1 1128 aa13.52□□□□□ -0.25
Ldlr-201ENSMUST00000034713 Rpap1Q80TE0 1409 aa13.51□□□□□ -0.25
Ldlr-201ENSMUST00000034713 Gm38655A0A286YDK6 273 aa13.51□□□□□ -0.25
Ldlr-201ENSMUST00000034713 Calr4Q3TQS0 420 aa13.51□□□□□ -0.25
Ldlr-201ENSMUST00000034713 AknaQ80VW7 1404 aa13.5□□□□□ -0.25
Ldlr-201ENSMUST00000034713 Efcab5A0JP43 1406 aa13.49□□□□□ -0.25
Ldlr-201ENSMUST00000034713 Mrc2Q64449 1479 aa13.49□□□□□ -0.25
Ldlr-201ENSMUST00000034713 1700123L14RikQ3V2K7 440 aa13.48□□□□□ -0.25
Ldlr-201ENSMUST00000034713 Ccdc9Q8VC31 543 aaKnown RBP13.47□□□□□ -0.25
Ldlr-201ENSMUST00000034713 Dnajc5bQ9CQ94 199 aa13.46□□□□□ -0.25
Ldlr-201ENSMUST00000034713 CntlnA2AM05 1397 aa13.46□□□□□ -0.25
Ldlr-201ENSMUST00000034713 Upf2A2AT37 1269 aaKnown RBP13.45□□□□□ -0.26
Ldlr-201ENSMUST00000034713 Cc2d2aQ8CFW7 1633 aa13.45□□□□□ -0.26
Ldlr-201ENSMUST00000034713 DaxxO35613 739 aa13.44□□□□□ -0.26
Ldlr-201ENSMUST00000034713 Top2aQ01320 1528 aaKnown RBP13.43□□□□□ -0.26
Ldlr-201ENSMUST00000034713 Mtus2Q3UHD3 1353 aa13.43□□□□□ -0.26
Ldlr-201ENSMUST00000034713 Zbtb4Q5F293 982 aa13.43□□□□□ -0.26
Ldlr-201ENSMUST00000034713 Shroom4Q1W617 1475 aa13.42□□□□□ -0.26
Ldlr-201ENSMUST00000034713 Plppr3Q7TPB0 716 aa13.42□□□□□ -0.26
Ldlr-201ENSMUST00000034713 Atp1b4Q99ME6 356 aa13.41□□□□□ -0.26
Ldlr-201ENSMUST00000034713 Aebp2Q9Z248 504 aaKnown RBP13.41□□□□□ -0.26
Ldlr-201ENSMUST00000034713 Wdr43Q6ZQL4 677 aaKnown RBP13.4□□□□□ -0.27
Ldlr-201ENSMUST00000034713 NrkQ9R0G8 1455 aa13.39□□□□□ -0.27
Ldlr-201ENSMUST00000034713 Mia2Q91ZV0 1396 aa13.39□□□□□ -0.27
Ldlr-201ENSMUST00000034713 Fyco1Q8VDC1 1437 aa13.39□□□□□ -0.27
Ldlr-201ENSMUST00000034713 Duox2A2AQ99 1517 aa13.38□□□□□ -0.27
Ldlr-201ENSMUST00000034713 Gm13695A2AK44 830 aa13.38□□□□□ -0.27
Ldlr-201ENSMUST00000034713 PogzQ8BZH4 1409 aaKnown RBP13.37□□□□□ -0.27
Ldlr-201ENSMUST00000034713 Urb2E9Q7L1 1524 aaKnown RBP13.37□□□□□ -0.27
Ldlr-201ENSMUST00000034713 Dhx57Q6P5D3 1388 aaKnown RBP13.36□□□□□ -0.27
Ldlr-201ENSMUST00000034713 Ppp4r2Q0VGB7 417 aa13.36□□□□□ -0.27
Ldlr-201ENSMUST00000034713 Top2bQ64511 1612 aa13.35□□□□□ -0.27
Ldlr-201ENSMUST00000034713 Grin2bQ01097 1482 aa13.34□□□□□ -0.27
Ldlr-201ENSMUST00000034713 Safb2Q80YR5 991 aaKnown RBP13.34□□□□□ -0.27
Ldlr-201ENSMUST00000034713 Rrp7aQ9D1C9 280 aaKnown RBP13.34□□□□□ -0.27
Ldlr-201ENSMUST00000034713 Lamc3Q9R0B6 1581 aa13.31□□□□□ -0.28
Ldlr-201ENSMUST00000034713 Mrs2Q5NCE8 434 aa13.3□□□□□ -0.28
Ldlr-201ENSMUST00000034713 Pabpn1Q8CCS6 302 aaKnown RBP13.3□□□□□ -0.28
Ldlr-201ENSMUST00000034713 Arid3cA6PWV5 409 aa13.3□□□□□ -0.28
Ldlr-201ENSMUST00000034713 Rad54l2Q99NG0 1466 aa13.29□□□□□ -0.28
Ldlr-201ENSMUST00000034713 Ppp1r18Q8BQ30 594 aa13.29□□□□□ -0.28
Ldlr-201ENSMUST00000034713 WrnO09053 1401 aa13.28□□□□□ -0.28
Ldlr-201ENSMUST00000034713 Camsap1A2AHC3 1581 aa13.27□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Polr1aO35134 1717 aaKnown RBP13.27□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Arhgap35Q91YM2 1499 aa13.25□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Nlrp6Q91WS2 869 aa13.25□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Ift140E9PY46 1464 aa13.24□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Map3k1P53349 1493 aa13.24□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Jph4Q80WT0 628 aa13.24□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Soga1E1U8D0 1418 aa13.23□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Rgl3Q3UYI5 709 aa13.23□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Lemd3Q9WU40 921 aa13.23□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Fam71e1A1L3C1 212 aa13.23□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Hsp90aa1P07901 733 aaKnown RBP13.22□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Plb1Q3TTY0 1478 aa13.22□□□□□ -0.29
Ldlr-201ENSMUST00000034713 Cc2d2bA0A286YDU8 1405 aa13.21□□□□□ -0.3
Ldlr-201ENSMUST00000034713 Mroh2bQ7M6Y6 1581 aa13.2□□□□□ -0.3
Ldlr-201ENSMUST00000034713 Prdm10Q3UTQ7 1184 aa13.2□□□□□ -0.3
Ldlr-201ENSMUST00000034713 Cabp1Q9JLK7 227 aa13.2□□□□□ -0.3
Ldlr-201ENSMUST00000034713 Ccnb3Q810T2 1396 aa13.19□□□□□ -0.3
Ldlr-201ENSMUST00000034713 Ncoa2Q61026 1462 aa13.18□□□□□ -0.3
Ldlr-201ENSMUST00000034713 PtprkP35822 1457 aa13.18□□□□□ -0.3
Ldlr-201ENSMUST00000034713 Fgd6Q69ZL1 1399 aa13.18□□□□□ -0.3
Ldlr-201ENSMUST00000034713 Map4P27546 1125 aaKnown RBP13.17□□□□□ -0.3
Ldlr-201ENSMUST00000034713 Crocc2F6XLV1 1638 aa13.17□□□□□ -0.3
Ldlr-201ENSMUST00000034713 Mroh3A0A1D5RM54 893 aa13.17□□□□□ -0.3
Ldlr-201ENSMUST00000034713 Fam135aQ6NS59 1506 aa13.17□□□□□ -0.3
Ldlr-201ENSMUST00000034713 Plekhh2Q8C115 1491 aa13.15□□□□□ -0.3
Ldlr-201ENSMUST00000034713 Ccdc27Q3V036 639 aa13.14□□□□□ -0.31
Ldlr-201ENSMUST00000034713 P3h3Q8CG70 732 aa13.13□□□□□ -0.31
Ldlr-201ENSMUST00000034713 Gm7298A0A0N4SVU1 1476 aa13.13□□□□□ -0.31
Ldlr-201ENSMUST00000034713 UacaQ8CGB3 1411 aa13.11□□□□□ -0.31
Ldlr-201ENSMUST00000034713 Cwc22Q8C5N3 908 aaKnown RBP13.11□□□□□ -0.31
Ldlr-201ENSMUST00000034713 EprsQ8CGC7 1512 aaKnown RBP13.1□□□□□ -0.31
Ldlr-201ENSMUST00000034713 Sart1Q9Z315 806 aaKnown RBP13.1□□□□□ -0.31
Ldlr-201ENSMUST00000034713 Pkd2O35245 966 aa13.1□□□□□ -0.31
Ldlr-201ENSMUST00000034713 Grwd1Q810D6 446 aaKnown RBP13.1□□□□□ -0.31
Ldlr-201ENSMUST00000034713 Srpk2O54781 681 aaKnown RBP13.09□□□□□ -0.31
Ldlr-201ENSMUST00000034713 Cux1P53564 1515 aa13.09□□□□□ -0.31
Ldlr-201ENSMUST00000034713 Bcl11aQ9QYE3 773 aa13.08□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms