RNA–Protein interactions for RNA: ENSMUST00000034053.6

Pdlim3-201, Transcript of PDZ and LIM domain protein 3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pdlim3, Length 1,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3-201ENSMUST00000034053 Gpatch8A2A6A1 1505 aa22.03■■□□□ 1.12
Pdlim3-201ENSMUST00000034053 Cux1P53564 1515 aa22■■□□□ 1.11
Pdlim3-201ENSMUST00000034053 Grin2aP35436 1464 aa22■■□□□ 1.11
Pdlim3-201ENSMUST00000034053 Arap1Q4LDD4 1452 aa21.99■■□□□ 1.11
Pdlim3-201ENSMUST00000034053 Rusc2Q80U22 1514 aa21.98■■□□□ 1.11
Pdlim3-201ENSMUST00000034053 Eea1Q8BL66 1411 aa21.98■■□□□ 1.11
Pdlim3-201ENSMUST00000034053 Nup160Q9Z0W3 1402 aaKnown RBP21.98■■□□□ 1.11
Pdlim3-201ENSMUST00000034053 Polr1aO35134 1717 aaKnown RBP21.98■■□□□ 1.11
Pdlim3-201ENSMUST00000034053 Lmo7E9PYF4 1699 aaKnown RBP21.95■■□□□ 1.11
Pdlim3-201ENSMUST00000034053 Arhgef5E9Q7D5 1581 aa21.92■■□□□ 1.1
Pdlim3-201ENSMUST00000034053 Setd5Q5XJV7 1441 aa21.92■■□□□ 1.1
Pdlim3-201ENSMUST00000034053 Pcf11G3X9Z4 1553 aa21.9■■□□□ 1.1
Pdlim3-201ENSMUST00000034053 EprsQ8CGC7 1512 aaKnown RBP21.9■■□□□ 1.1
Pdlim3-201ENSMUST00000034053 Acin1Q9JIX8 1338 aaKnown RBP21.89■■□□□ 1.09
Pdlim3-201ENSMUST00000034053 Cc2d2bA0A286YDU8 1405 aa21.88■■□□□ 1.09
Pdlim3-201ENSMUST00000034053 Adamts12Q811B3 1600 aa21.88■■□□□ 1.09
Pdlim3-201ENSMUST00000034053 WizO88286 1684 aaKnown RBP21.87■■□□□ 1.09
Pdlim3-201ENSMUST00000034053 Abca5Q8K448 1642 aa21.85■■□□□ 1.09
Pdlim3-201ENSMUST00000034053 Abca16E9PWJ7 1678 aa21.84■■□□□ 1.09
Pdlim3-201ENSMUST00000034053 Fyco1Q8VDC1 1437 aa21.84■■□□□ 1.09
Pdlim3-201ENSMUST00000034053 Rpap1Q80TE0 1409 aa21.82■■□□□ 1.08
Pdlim3-201ENSMUST00000034053 Tiam1Q60610 1591 aa21.81■■□□□ 1.08
Pdlim3-201ENSMUST00000034053 TchhA0A0B4J1F9 1599 aa21.78■■□□□ 1.08
Pdlim3-201ENSMUST00000034053 Slx4Q6P1D7 1565 aa21.75■■□□□ 1.07
Pdlim3-201ENSMUST00000034053 CadpsQ80TJ1 1355 aa21.74■■□□□ 1.07
Pdlim3-201ENSMUST00000034053 Gm7298A0A0N4SVU1 1476 aa21.74■■□□□ 1.07
Pdlim3-201ENSMUST00000034053 Ap3b1Q9Z1T1 1105 aa21.73■■□□□ 1.07
Pdlim3-201ENSMUST00000034053 PxdnQ3UQ28 1475 aa21.73■■□□□ 1.07
Pdlim3-201ENSMUST00000034053 Peg3Q3URU2 1571 aa21.73■■□□□ 1.07
Pdlim3-201ENSMUST00000034053 Plekhg3Q4VAC9 1341 aa21.71■■□□□ 1.07
Pdlim3-201ENSMUST00000034053 Naip1Q9QWK5 1403 aa21.7■■□□□ 1.06
Pdlim3-201ENSMUST00000034053 Abcc2Q8VI47 1543 aa21.67■■□□□ 1.06
Pdlim3-201ENSMUST00000034053 Soga1E1U8D0 1418 aa21.67■■□□□ 1.06
Pdlim3-201ENSMUST00000034053 BlmO88700 1416 aa21.67■■□□□ 1.06
Pdlim3-201ENSMUST00000034053 Rpgrip1Q9EPQ2 1331 aa21.66■■□□□ 1.06
Pdlim3-201ENSMUST00000034053 CntlnA2AM05 1397 aa21.64■■□□□ 1.05
Pdlim3-201ENSMUST00000034053 UbtfP25976 765 aaKnown RBP21.6■■□□□ 1.05
Pdlim3-201ENSMUST00000034053 Aebp1Q640N1 1128 aa21.59■■□□□ 1.05
Pdlim3-201ENSMUST00000034053 Dnmt1P13864 1620 aaKnown RBP21.55■■□□□ 1.04
Pdlim3-201ENSMUST00000034053 Map3k4O08648 1597 aa21.54■■□□□ 1.04
Pdlim3-201ENSMUST00000034053 Gm1043A0A140LJC2 1431 aa21.54■■□□□ 1.04
Pdlim3-201ENSMUST00000034053 Fgd6Q69ZL1 1399 aa21.54■■□□□ 1.04
Pdlim3-201ENSMUST00000034053 Shroom2A2ALU4 1481 aa21.51■■□□□ 1.03
Pdlim3-201ENSMUST00000034053 BC005561E9Q5E2 1589 aa21.51■■□□□ 1.03
Pdlim3-201ENSMUST00000034053 Mier1Q5UAK0 511 aa21.51■■□□□ 1.03
Pdlim3-201ENSMUST00000034053 Ncapd3Q6ZQK0 1506 aa21.5■■□□□ 1.03
Pdlim3-201ENSMUST00000034053 Arhgap27A2AB59 869 aa21.49■■□□□ 1.03
Pdlim3-201ENSMUST00000034053 Zcchc11B2RX14 1644 aaKnown RBP21.49■■□□□ 1.03
Pdlim3-201ENSMUST00000034053 WrnO09053 1401 aa21.45■■□□□ 1.02
Pdlim3-201ENSMUST00000034053 Rapgef6Q5NCJ1 1609 aa21.44■■□□□ 1.02
Pdlim3-201ENSMUST00000034053 Kif27Q7M6Z4 1394 aa21.43■■□□□ 1.02
Pdlim3-201ENSMUST00000034053 AknaQ80VW7 1404 aa21.43■■□□□ 1.02
Pdlim3-201ENSMUST00000034053 Neo1P97798 1493 aa21.4■■□□□ 1.02
Pdlim3-201ENSMUST00000034053 Lmod2Q3UHZ5 550 aa21.4■■□□□ 1.02
Pdlim3-201ENSMUST00000034053 Chd1P40201 1711 aa21.39■■□□□ 1.01
Pdlim3-201ENSMUST00000034053 Gcc2Q8CHG3 1679 aa21.37■■□□□ 1.01
Pdlim3-201ENSMUST00000034053 Abcc1O35379 1528 aa21.36■■□□□ 1.01
Pdlim3-201ENSMUST00000034053 Lmtk2Q3TYD6 1471 aa21.34■■□□□ 1.01
Pdlim3-201ENSMUST00000034053 Arhgef11Q68FM7 1552 aa21.34■■□□□ 1.01
Pdlim3-201ENSMUST00000034053 Cdc42bpaQ3UU96 1719 aa21.33■■□□□ 1.01
Pdlim3-201ENSMUST00000034053 NexmifQ5DTT1 1515 aa21.32■■□□□ 1
Pdlim3-201ENSMUST00000034053 Rrbp1Q99PL5 1605 aaKnown RBP21.31■■□□□ 1
Pdlim3-201ENSMUST00000034053 Arhgef12Q8R4H2 1543 aaKnown RBP21.3■■□□□ 1
Pdlim3-201ENSMUST00000034053 Pabpn1Q8CCS6 302 aaKnown RBP21.29■■□□□ 1
Pdlim3-201ENSMUST00000034053 Mroh2aD3Z750 1679 aa21.29■■□□□ 1
Pdlim3-201ENSMUST00000034053 3425401B19RikD3Z1D3 1412 aa21.29■■□□□ 1
Pdlim3-201ENSMUST00000034053 Pelp1Q9DBD5 1123 aaKnown RBP21.27■■□□□ 1
Pdlim3-201ENSMUST00000034053 Mug1P28665 1476 aa21.26■□□□□ 0.99
Pdlim3-201ENSMUST00000034053 Ccdc141E9Q8Q6 1531 aa21.26■□□□□ 0.99
Pdlim3-201ENSMUST00000034053 Gm14025A2AP89 1413 aa21.26■□□□□ 0.99
Pdlim3-201ENSMUST00000034053 Arhgap31A6X8Z5 1425 aa21.25■□□□□ 0.99
Pdlim3-201ENSMUST00000034053 Ncoa3O09000 1398 aa21.24■□□□□ 0.99
Pdlim3-201ENSMUST00000034053 Kdm5bQ80Y84 1544 aa21.24■□□□□ 0.99
Pdlim3-201ENSMUST00000034053 Jph4Q80WT0 628 aa21.22■□□□□ 0.99
Pdlim3-201ENSMUST00000034053 Kiaa1551Q5DTW7 1521 aa21.21■□□□□ 0.99
Pdlim3-201ENSMUST00000034053 Ncoa2Q61026 1462 aa21.21■□□□□ 0.99
Pdlim3-201ENSMUST00000034053 Ccnb3Q810T2 1396 aa21.21■□□□□ 0.99
Pdlim3-201ENSMUST00000034053 Cul7Q8VE73 1689 aa21.18■□□□□ 0.98
Pdlim3-201ENSMUST00000034053 Gapvd1Q6PAR5 1458 aa21.17■□□□□ 0.98
Pdlim3-201ENSMUST00000034053 Magi1Q6RHR9 1471 aa21.15■□□□□ 0.98
Pdlim3-201ENSMUST00000034053 Prex2Q3LAC4 1598 aa21.14■□□□□ 0.98
Pdlim3-201ENSMUST00000034053 A2mQ6GQT1 1474 aa21.14■□□□□ 0.97
Pdlim3-201ENSMUST00000034053 Cep170Q6A065 1588 aa21.14■□□□□ 0.97
Pdlim3-201ENSMUST00000034053 NefmP08553 848 aa21.13■□□□□ 0.97
Pdlim3-201ENSMUST00000034053 Ythdc2B2RR83 1445 aaKnown RBP21.12■□□□□ 0.97
Pdlim3-201ENSMUST00000034053 Mapkbp1Q6NS57 1503 aa21.11■□□□□ 0.97
Pdlim3-201ENSMUST00000034053 Adcy10Q8C0T9 1614 aa21.1■□□□□ 0.97
Pdlim3-201ENSMUST00000034053 Naip2Q9QUK4 1447 aa21.08■□□□□ 0.97
Pdlim3-201ENSMUST00000034053 PtprtQ99M80 1454 aa21.08■□□□□ 0.97
Pdlim3-201ENSMUST00000034053 Dhx57Q6P5D3 1388 aaKnown RBP21.08■□□□□ 0.96
Pdlim3-201ENSMUST00000034053 Kdm6bQ5NCY0 1641 aa21.07■□□□□ 0.96
Pdlim3-201ENSMUST00000034053 Arhgef40Q3UPH7 1517 aa21.06■□□□□ 0.96
Pdlim3-201ENSMUST00000034053 NhsB1AV60 1647 aa21.05■□□□□ 0.96
Pdlim3-201ENSMUST00000034053 Fancd2Q80V62 1450 aa21.05■□□□□ 0.96
Pdlim3-201ENSMUST00000034053 Fkbp15Q6P9Q6 1216 aaKnown RBP21.04■□□□□ 0.96
Pdlim3-201ENSMUST00000034053 Fam208aQ69ZR9 1610 aaKnown RBP21.04■□□□□ 0.96
Pdlim3-201ENSMUST00000034053 Fam163aQ8CAA5 168 aa21.04■□□□□ 0.96
Pdlim3-201ENSMUST00000034053 Kiaa1210E9Q0C6 1637 aa21.03■□□□□ 0.96
Pdlim3-201ENSMUST00000034053 Col17a1Q07563 1470 aa21.02■□□□□ 0.96
Pdlim3-201ENSMUST00000034053 Fhad1A6PWD2 1420 aa21■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms