RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Chic2Q9D9G3 165 aa11.49□□□□□ -0.57
Ccdc39-201ENSMUST00000029222 Carmil1Q6EDY6 1374 aa11.48□□□□□ -0.57
Ccdc39-201ENSMUST00000029222 TonslQ6NZL6 1363 aa11.46□□□□□ -0.57
Ccdc39-201ENSMUST00000029222 Fam135aQ6NS59 1506 aa11.46□□□□□ -0.58
Ccdc39-201ENSMUST00000029222 Mroh2bQ7M6Y6 1581 aa11.45□□□□□ -0.58
Ccdc39-201ENSMUST00000029222 Rpap1Q80TE0 1409 aa11.45□□□□□ -0.58
Ccdc39-201ENSMUST00000029222 Zbtb7cQ8VCZ7 619 aa11.43□□□□□ -0.58
Ccdc39-201ENSMUST00000029222 Unc13aQ4KUS2 1712 aa11.43□□□□□ -0.58
Ccdc39-201ENSMUST00000029222 Urb2E9Q7L1 1524 aaKnown RBP11.42□□□□□ -0.58
Ccdc39-201ENSMUST00000029222 Plb1Q3TTY0 1478 aa11.42□□□□□ -0.58
Ccdc39-201ENSMUST00000029222 Arap1Q4LDD4 1452 aa11.41□□□□□ -0.58
Ccdc39-201ENSMUST00000029222 Neurod1Q60867 357 aa11.4□□□□□ -0.58
Ccdc39-201ENSMUST00000029222 Pelp1Q9DBD5 1123 aaKnown RBP11.4□□□□□ -0.58
Ccdc39-201ENSMUST00000029222 Kif27Q7M6Z4 1394 aa11.37□□□□□ -0.59
Ccdc39-201ENSMUST00000029222 NclP09405 707 aaKnown RBP11.36□□□□□ -0.59
Ccdc39-201ENSMUST00000029222 Map3k1P53349 1493 aa11.35□□□□□ -0.59
Ccdc39-201ENSMUST00000029222 CntlnA2AM05 1397 aa11.34□□□□□ -0.59
Ccdc39-201ENSMUST00000029222 Sall2Q9QX96 1004 aa11.34□□□□□ -0.59
Ccdc39-201ENSMUST00000029222 Aebp2Q9Z248 504 aaKnown RBP11.33□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 Fyco1Q8VDC1 1437 aa11.33□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 Crocc2F6XLV1 1638 aa11.33□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 AknaQ80VW7 1404 aa11.31□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 Naip1Q9QWK5 1403 aa11.31□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 Mapk8ip2Q9ERE9 830 aa11.3□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 WrnO09053 1401 aa11.3□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 AqrQ8CFQ3 1481 aaKnown RBP11.3□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 Cux1P53564 1515 aa11.3□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 Samd9lQ69Z37 1561 aa11.29□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 EprsQ8CGC7 1512 aaKnown RBP11.28□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 Kif21aQ9QXL2 1672 aa11.28□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 Arhgef5E9Q7D5 1581 aa11.28□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 SynmQ70IV5 1561 aa11.28□□□□□ -0.6
Ccdc39-201ENSMUST00000029222 CadpsQ80TJ1 1355 aa11.27□□□□□ -0.61
Ccdc39-201ENSMUST00000029222 Hnrnpul2Q00PI9 745 aaKnown RBP11.25□□□□□ -0.61
Ccdc39-201ENSMUST00000029222 Grin2aP35436 1464 aa11.25□□□□□ -0.61
Ccdc39-201ENSMUST00000029222 Gm7298A0A0N4SVU1 1476 aa11.24□□□□□ -0.61
Ccdc39-201ENSMUST00000029222 Ccnb3Q810T2 1396 aa11.24□□□□□ -0.61
Ccdc39-201ENSMUST00000029222 Cabp1Q9JLK7 227 aa11.23□□□□□ -0.61
Ccdc39-201ENSMUST00000029222 Disp1Q3TDN0 1521 aa11.22□□□□□ -0.61
Ccdc39-201ENSMUST00000029222 Ankrd26Q811D2 1581 aa11.22□□□□□ -0.61
Ccdc39-201ENSMUST00000029222 Eif4g1Q6NZJ6 1600 aaKnown RBP11.21□□□□□ -0.61
Ccdc39-201ENSMUST00000029222 Pcf11G3X9Z4 1553 aa11.2□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 Ift140E9PY46 1464 aa11.2□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 Hspa5P20029 655 aaKnown RBP11.2□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 Tiam1Q60610 1591 aa11.19□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 Pla2r1Q62028 1487 aa11.19□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 ClspnQ80YR7 1315 aa11.18□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 Ccer2J3QPU5 274 aa11.17□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 Slc24a1Q91WD8 1130 aa11.17□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 Polr1aO35134 1717 aaKnown RBP11.17□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 Ncapd3Q6ZQK0 1506 aa11.17□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 Jph4Q80WT0 628 aa11.16□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 Arid3cA6PWV5 409 aa11.16□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 PxdnQ3UQ28 1475 aa11.15□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 Magi3Q9EQJ9 1476 aa11.15□□□□□ -0.62
Ccdc39-201ENSMUST00000029222 Mtus2Q3UHD3 1353 aa11.14□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Slx4Q6P1D7 1565 aa11.14□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Cc2d2bA0A286YDU8 1405 aa11.14□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Zbtb4Q5F293 982 aa11.14□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Mia2Q91ZV0 1396 aa11.13□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Gpatch8A2A6A1 1505 aa11.12□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Arhgap31A6X8Z5 1425 aa11.12□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Cdk11bP24788 784 aaKnown RBP11.12□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Rrp7aQ9D1C9 280 aaKnown RBP11.12□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Nop58Q6DFW4 536 aaKnown RBP11.11□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Erich6D3Z6S9 713 aa11.11□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 WizO88286 1684 aaKnown RBP11.1□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Soga1E1U8D0 1418 aa11.09□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Zfp644E9QA22 1323 aa11.09□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Tdrd9Q14BI7 1383 aa11.09□□□□□ -0.63
Ccdc39-201ENSMUST00000029222 Neo1P97798 1493 aa11.07□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Fgd6Q69ZL1 1399 aa11.07□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Mphosph9A6H5Y1 991 aa11.07□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Rgl3Q3UYI5 709 aa11.07□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Gm1043A0A140LJC2 1431 aa11.07□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 TchhA0A0B4J1F9 1599 aa11.07□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 3425401B19RikD3Z1D3 1412 aa11.07□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Nup160Q9Z0W3 1402 aaKnown RBP11.06□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Pkd2O35245 966 aa11.05□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Plppr3Q7TPB0 716 aa11.04□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Lrriq1Q0P5X1 1673 aa11.04□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Trak1Q6PD31 939 aa11.04□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Plekhh2Q8C115 1491 aa11.03□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Mug1P28665 1476 aa11.02□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Ncoa3O09000 1398 aa11.02□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Os9Q8K2C7 672 aa11.02□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 Sart1Q9Z315 806 aaKnown RBP11.02□□□□□ -0.64
Ccdc39-201ENSMUST00000029222 NexmifQ5DTT1 1515 aa11.02□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Grwd1Q810D6 446 aaKnown RBP11.02□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Dhx57Q6P5D3 1388 aaKnown RBP11.01□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Ttbk1Q6PCN3 1308 aa11.01□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Sin3aQ60520 1274 aaKnown RBP11.01□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Erich3F6QRE9 1637 aa11.01□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Pabpn1Q8CCS6 302 aaKnown RBP11.01□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Map4P27546 1125 aaKnown RBP11□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 A2mQ6GQT1 1474 aa11□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 BC005561E9Q5E2 1589 aa10.99□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Shroom2A2ALU4 1481 aa10.99□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Fhad1A6PWD2 1420 aa10.99□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Gm14025A2AP89 1413 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms