RNA–Protein interactions for RNA: ENSMUST00000022330.8

Ldb3-203, Transcript of LIM domain-binding protein 3, mousemouse

TSL 1 (best) BASIC

Gene Ldb3, Length 1,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-203ENSMUST00000022330 Ankrd26Q811D2 1581 aa19.06■□□□□ 0.64
Ldb3-203ENSMUST00000022330 Grin2aP35436 1464 aa19.06■□□□□ 0.64
Ldb3-203ENSMUST00000022330 Eif4g3Q80XI3 1579 aaKnown RBP19.04■□□□□ 0.64
Ldb3-203ENSMUST00000022330 Setd1bQ8CFT2 1985 aa19.02■□□□□ 0.63
Ldb3-203ENSMUST00000022330 Nup160Q9Z0W3 1402 aaKnown RBP19.01■□□□□ 0.63
Ldb3-203ENSMUST00000022330 Cux1P53564 1515 aa19.01■□□□□ 0.63
Ldb3-203ENSMUST00000022330 Arap1Q4LDD4 1452 aa18.99■□□□□ 0.63
Ldb3-203ENSMUST00000022330 Setd5Q5XJV7 1441 aa18.99■□□□□ 0.63
Ldb3-203ENSMUST00000022330 Rpap1Q80TE0 1409 aa18.98■□□□□ 0.63
Ldb3-203ENSMUST00000022330 EprsQ8CGC7 1512 aaKnown RBP18.96■□□□□ 0.63
Ldb3-203ENSMUST00000022330 Fyco1Q8VDC1 1437 aa18.96■□□□□ 0.63
Ldb3-203ENSMUST00000022330 Arhgef5E9Q7D5 1581 aa18.96■□□□□ 0.63
Ldb3-203ENSMUST00000022330 Lmo7E9PYF4 1699 aaKnown RBP18.94■□□□□ 0.62
Ldb3-203ENSMUST00000022330 Adamts12Q811B3 1600 aa18.93■□□□□ 0.62
Ldb3-203ENSMUST00000022330 Pcf11G3X9Z4 1553 aa18.92■□□□□ 0.62
Ldb3-203ENSMUST00000022330 Cc2d2bA0A286YDU8 1405 aa18.92■□□□□ 0.62
Ldb3-203ENSMUST00000022330 Rusc2Q80U22 1514 aa18.92■□□□□ 0.62
Ldb3-203ENSMUST00000022330 Acin1Q9JIX8 1338 aaKnown RBP18.91■□□□□ 0.62
Ldb3-203ENSMUST00000022330 Abca5Q8K448 1642 aa18.89■□□□□ 0.61
Ldb3-203ENSMUST00000022330 WizO88286 1684 aaKnown RBP18.88■□□□□ 0.61
Ldb3-203ENSMUST00000022330 TchhA0A0B4J1F9 1599 aa18.88■□□□□ 0.61
Ldb3-203ENSMUST00000022330 Tiam1Q60610 1591 aa18.86■□□□□ 0.61
Ldb3-203ENSMUST00000022330 Abca16E9PWJ7 1678 aa18.85■□□□□ 0.61
Ldb3-203ENSMUST00000022330 Rpgrip1Q9EPQ2 1331 aa18.84■□□□□ 0.61
Ldb3-203ENSMUST00000022330 CadpsQ80TJ1 1355 aa18.83■□□□□ 0.61
Ldb3-203ENSMUST00000022330 Gm7298A0A0N4SVU1 1476 aa18.82■□□□□ 0.6
Ldb3-203ENSMUST00000022330 Peg3Q3URU2 1571 aa18.81■□□□□ 0.6
Ldb3-203ENSMUST00000022330 Soga1E1U8D0 1418 aa18.79■□□□□ 0.6
Ldb3-203ENSMUST00000022330 PxdnQ3UQ28 1475 aa18.78■□□□□ 0.6
Ldb3-203ENSMUST00000022330 Ap3b1Q9Z1T1 1105 aa18.78■□□□□ 0.6
Ldb3-203ENSMUST00000022330 CntlnA2AM05 1397 aa18.77■□□□□ 0.6
Ldb3-203ENSMUST00000022330 BlmO88700 1416 aa18.77■□□□□ 0.59
Ldb3-203ENSMUST00000022330 Naip1Q9QWK5 1403 aa18.77■□□□□ 0.59
Ldb3-203ENSMUST00000022330 Slx4Q6P1D7 1565 aa18.76■□□□□ 0.59
Ldb3-203ENSMUST00000022330 Plekhg3Q4VAC9 1341 aa18.76■□□□□ 0.59
Ldb3-203ENSMUST00000022330 Abcc2Q8VI47 1543 aa18.72■□□□□ 0.59
Ldb3-203ENSMUST00000022330 Aebp1Q640N1 1128 aa18.71■□□□□ 0.59
Ldb3-203ENSMUST00000022330 UbtfP25976 765 aaKnown RBP18.68■□□□□ 0.58
Ldb3-203ENSMUST00000022330 Map3k4O08648 1597 aa18.66■□□□□ 0.58
Ldb3-203ENSMUST00000022330 Shroom2A2ALU4 1481 aa18.63■□□□□ 0.57
Ldb3-203ENSMUST00000022330 Dnmt1P13864 1620 aaKnown RBP18.62■□□□□ 0.57
Ldb3-203ENSMUST00000022330 Gm1043A0A140LJC2 1431 aa18.61■□□□□ 0.57
Ldb3-203ENSMUST00000022330 Arhgap27A2AB59 869 aa18.59■□□□□ 0.57
Ldb3-203ENSMUST00000022330 Kif27Q7M6Z4 1394 aa18.59■□□□□ 0.57
Ldb3-203ENSMUST00000022330 WrnO09053 1401 aa18.59■□□□□ 0.57
Ldb3-203ENSMUST00000022330 BC005561E9Q5E2 1589 aa18.58■□□□□ 0.56
Ldb3-203ENSMUST00000022330 Fgd6Q69ZL1 1399 aa18.56■□□□□ 0.56
Ldb3-203ENSMUST00000022330 Mier1Q5UAK0 511 aa18.56■□□□□ 0.56
Ldb3-203ENSMUST00000022330 Rapgef6Q5NCJ1 1609 aa18.55■□□□□ 0.56
Ldb3-203ENSMUST00000022330 Ncapd3Q6ZQK0 1506 aa18.55■□□□□ 0.56
Ldb3-203ENSMUST00000022330 Lmod2Q3UHZ5 550 aa18.51■□□□□ 0.55
Ldb3-203ENSMUST00000022330 Neo1P97798 1493 aa18.49■□□□□ 0.55
Ldb3-203ENSMUST00000022330 Zcchc11B2RX14 1644 aaKnown RBP18.48■□□□□ 0.55
Ldb3-203ENSMUST00000022330 Lmtk2Q3TYD6 1471 aa18.48■□□□□ 0.55
Ldb3-203ENSMUST00000022330 Rrbp1Q99PL5 1605 aaKnown RBP18.46■□□□□ 0.55
Ldb3-203ENSMUST00000022330 AknaQ80VW7 1404 aa18.46■□□□□ 0.55
Ldb3-203ENSMUST00000022330 Gcc2Q8CHG3 1679 aa18.46■□□□□ 0.55
Ldb3-203ENSMUST00000022330 Arhgef12Q8R4H2 1543 aaKnown RBP18.45■□□□□ 0.54
Ldb3-203ENSMUST00000022330 Arhgef11Q68FM7 1552 aa18.45■□□□□ 0.54
Ldb3-203ENSMUST00000022330 Ncoa2Q61026 1462 aa18.44■□□□□ 0.54
Ldb3-203ENSMUST00000022330 Ccdc141E9Q8Q6 1531 aa18.44■□□□□ 0.54
Ldb3-203ENSMUST00000022330 NexmifQ5DTT1 1515 aa18.44■□□□□ 0.54
Ldb3-203ENSMUST00000022330 Arhgap31A6X8Z5 1425 aa18.43■□□□□ 0.54
Ldb3-203ENSMUST00000022330 Mug1P28665 1476 aa18.41■□□□□ 0.54
Ldb3-203ENSMUST00000022330 Chd1P40201 1711 aa18.39■□□□□ 0.53
Ldb3-203ENSMUST00000022330 Abcc1O35379 1528 aa18.38■□□□□ 0.53
Ldb3-203ENSMUST00000022330 Cdc42bpaQ3UU96 1719 aa18.38■□□□□ 0.53
Ldb3-203ENSMUST00000022330 Mroh2aD3Z750 1679 aa18.38■□□□□ 0.53
Ldb3-203ENSMUST00000022330 Gm14025A2AP89 1413 aa18.37■□□□□ 0.53
Ldb3-203ENSMUST00000022330 3425401B19RikD3Z1D3 1412 aa18.37■□□□□ 0.53
Ldb3-203ENSMUST00000022330 Ncoa3O09000 1398 aa18.37■□□□□ 0.53
Ldb3-203ENSMUST00000022330 Ccnb3Q810T2 1396 aa18.37■□□□□ 0.53
Ldb3-203ENSMUST00000022330 Jph4Q80WT0 628 aa18.37■□□□□ 0.53
Ldb3-203ENSMUST00000022330 Kiaa1551Q5DTW7 1521 aa18.36■□□□□ 0.53
Ldb3-203ENSMUST00000022330 NefmP08553 848 aa18.35■□□□□ 0.53
Ldb3-203ENSMUST00000022330 Dhx57Q6P5D3 1388 aaKnown RBP18.35■□□□□ 0.53
Ldb3-203ENSMUST00000022330 Magi1Q6RHR9 1471 aa18.34■□□□□ 0.53
Ldb3-203ENSMUST00000022330 Kdm5bQ80Y84 1544 aa18.29■□□□□ 0.52
Ldb3-203ENSMUST00000022330 Mapkbp1Q6NS57 1503 aa18.28■□□□□ 0.52
Ldb3-203ENSMUST00000022330 Fam163aQ8CAA5 168 aa18.27■□□□□ 0.52
Ldb3-203ENSMUST00000022330 Prex2Q3LAC4 1598 aa18.26■□□□□ 0.51
Ldb3-203ENSMUST00000022330 A2mQ6GQT1 1474 aa18.26■□□□□ 0.51
Ldb3-203ENSMUST00000022330 Fancd2Q80V62 1450 aa18.26■□□□□ 0.51
Ldb3-203ENSMUST00000022330 Cul7Q8VE73 1689 aa18.25■□□□□ 0.51
Ldb3-203ENSMUST00000022330 Pabpn1Q8CCS6 302 aaKnown RBP18.24■□□□□ 0.51
Ldb3-203ENSMUST00000022330 Kiaa1210E9Q0C6 1637 aa18.24■□□□□ 0.51
Ldb3-203ENSMUST00000022330 Naip2Q9QUK4 1447 aa18.23■□□□□ 0.51
Ldb3-203ENSMUST00000022330 Mia2Q91ZV0 1396 aa18.23■□□□□ 0.51
Ldb3-203ENSMUST00000022330 NhsB1AV60 1647 aa18.22■□□□□ 0.51
Ldb3-203ENSMUST00000022330 Adcy10Q8C0T9 1614 aa18.22■□□□□ 0.51
Ldb3-203ENSMUST00000022330 Fhad1A6PWD2 1420 aa18.21■□□□□ 0.51
Ldb3-203ENSMUST00000022330 Wdr7Q920I9 1489 aa18.19■□□□□ 0.5
Ldb3-203ENSMUST00000022330 Arhgef40Q3UPH7 1517 aa18.19■□□□□ 0.5
Ldb3-203ENSMUST00000022330 Fam208aQ69ZR9 1610 aaKnown RBP18.18■□□□□ 0.5
Ldb3-203ENSMUST00000022330 Pelp1Q9DBD5 1123 aaKnown RBP18.18■□□□□ 0.5
Ldb3-203ENSMUST00000022330 Fam50aQ9WV03 339 aaKnown RBP18.18■□□□□ 0.5
Ldb3-203ENSMUST00000022330 Vps8Q0P5W1 1427 aa18.18■□□□□ 0.5
Ldb3-203ENSMUST00000022330 UacaQ8CGB3 1411 aa18.17■□□□□ 0.5
Ldb3-203ENSMUST00000022330 Fkbp15Q6P9Q6 1216 aaKnown RBP18.17■□□□□ 0.5
Ldb3-203ENSMUST00000022330 Mlh3A0A1Y7VMP7 1443 aa18.16■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 109.5 ms