RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Safb2Q80YR5 991 aaKnown RBP11.3□□□□□ -0.6
Lig3-201ENSMUST00000021039 Chic2Q9D9G3 165 aa11.3□□□□□ -0.6
Lig3-201ENSMUST00000021039 Pabpn1Q8CCS6 302 aaKnown RBP11.3□□□□□ -0.6
Lig3-201ENSMUST00000021039 Kif27Q7M6Z4 1394 aa11.29□□□□□ -0.6
Lig3-201ENSMUST00000021039 Dnajc5bQ9CQ94 199 aa11.28□□□□□ -0.6
Lig3-201ENSMUST00000021039 Efcab5A0JP43 1406 aa11.27□□□□□ -0.6
Lig3-201ENSMUST00000021039 Ppp1r18Q8BQ30 594 aa11.27□□□□□ -0.6
Lig3-201ENSMUST00000021039 Anp32bQ9EST5 272 aaKnown RBP11.27□□□□□ -0.61
Lig3-201ENSMUST00000021039 Aebp1Q640N1 1128 aa11.26□□□□□ -0.61
Lig3-201ENSMUST00000021039 Urb2E9Q7L1 1524 aaKnown RBP11.26□□□□□ -0.61
Lig3-201ENSMUST00000021039 Stra8P70278 393 aa11.26□□□□□ -0.61
Lig3-201ENSMUST00000021039 Atp1b4Q99ME6 356 aa11.26□□□□□ -0.61
Lig3-201ENSMUST00000021039 Gm13695A2AK44 830 aa11.25□□□□□ -0.61
Lig3-201ENSMUST00000021039 Rapgef2Q8CHG7 1496 aa11.22□□□□□ -0.61
Lig3-201ENSMUST00000021039 Duox2A2AQ99 1517 aa11.21□□□□□ -0.62
Lig3-201ENSMUST00000021039 PogzQ8BZH4 1409 aaKnown RBP11.2□□□□□ -0.62
Lig3-201ENSMUST00000021039 Shroom4Q1W617 1475 aa11.19□□□□□ -0.62
Lig3-201ENSMUST00000021039 CntlnA2AM05 1397 aa11.19□□□□□ -0.62
Lig3-201ENSMUST00000021039 Arid3cA6PWV5 409 aa11.18□□□□□ -0.62
Lig3-201ENSMUST00000021039 Mtus2Q3UHD3 1353 aa11.18□□□□□ -0.62
Lig3-201ENSMUST00000021039 Dhx57Q6P5D3 1388 aaKnown RBP11.18□□□□□ -0.62
Lig3-201ENSMUST00000021039 Fyco1Q8VDC1 1437 aa11.18□□□□□ -0.62
Lig3-201ENSMUST00000021039 NrkQ9R0G8 1455 aa11.17□□□□□ -0.62
Lig3-201ENSMUST00000021039 Top2aQ01320 1528 aaKnown RBP11.17□□□□□ -0.62
Lig3-201ENSMUST00000021039 Lamc3Q9R0B6 1581 aa11.17□□□□□ -0.62
Lig3-201ENSMUST00000021039 Grin2bQ01097 1482 aa11.16□□□□□ -0.62
Lig3-201ENSMUST00000021039 Ift140E9PY46 1464 aa11.15□□□□□ -0.62
Lig3-201ENSMUST00000021039 Eid3Q3V124 375 aa11.15□□□□□ -0.62
Lig3-201ENSMUST00000021039 Rrp7aQ9D1C9 280 aaKnown RBP11.15□□□□□ -0.63
Lig3-201ENSMUST00000021039 Soga1E1U8D0 1418 aa11.14□□□□□ -0.63
Lig3-201ENSMUST00000021039 Fam135aQ6NS59 1506 aa11.14□□□□□ -0.63
Lig3-201ENSMUST00000021039 Rad54l2Q99NG0 1466 aa11.13□□□□□ -0.63
Lig3-201ENSMUST00000021039 Top2bQ64511 1612 aa11.13□□□□□ -0.63
Lig3-201ENSMUST00000021039 NrdcQ8BHG1 1161 aa11.12□□□□□ -0.63
Lig3-201ENSMUST00000021039 Plb1Q3TTY0 1478 aa11.12□□□□□ -0.63
Lig3-201ENSMUST00000021039 Camsap1A2AHC3 1581 aa11.11□□□□□ -0.63
Lig3-201ENSMUST00000021039 Polr1aO35134 1717 aaKnown RBP11.11□□□□□ -0.63
Lig3-201ENSMUST00000021039 Cc2d2bA0A286YDU8 1405 aa11.1□□□□□ -0.63
Lig3-201ENSMUST00000021039 WrnO09053 1401 aa11.1□□□□□ -0.63
Lig3-201ENSMUST00000021039 Jph4Q80WT0 628 aa11.1□□□□□ -0.63
Lig3-201ENSMUST00000021039 Lemd3Q9WU40 921 aa11.1□□□□□ -0.63
Lig3-201ENSMUST00000021039 Crocc2F6XLV1 1638 aa11.1□□□□□ -0.63
Lig3-201ENSMUST00000021039 Fgd6Q69ZL1 1399 aa11.09□□□□□ -0.63
Lig3-201ENSMUST00000021039 Thoc2B1AZI6 1594 aaKnown RBP11.08□□□□□ -0.64
Lig3-201ENSMUST00000021039 Mia2Q91ZV0 1396 aa11.08□□□□□ -0.64
Lig3-201ENSMUST00000021039 4933416C03RikQ3V063 378 aa11.07□□□□□ -0.64
Lig3-201ENSMUST00000021039 Ncoa2Q61026 1462 aa11.06□□□□□ -0.64
Lig3-201ENSMUST00000021039 Zbtb4Q5F293 982 aa11.05□□□□□ -0.64
Lig3-201ENSMUST00000021039 MyclP10166 368 aa11.03□□□□□ -0.64
Lig3-201ENSMUST00000021039 P3h3Q8CG70 732 aa11.03□□□□□ -0.64
Lig3-201ENSMUST00000021039 Map3k1P53349 1493 aa11.01□□□□□ -0.65
Lig3-201ENSMUST00000021039 Arhgap35Q91YM2 1499 aa11□□□□□ -0.65
Lig3-201ENSMUST00000021039 CadpsQ80TJ1 1355 aa11□□□□□ -0.65
Lig3-201ENSMUST00000021039 Mroh2bQ7M6Y6 1581 aa11□□□□□ -0.65
Lig3-201ENSMUST00000021039 Gm7298A0A0N4SVU1 1476 aa10.98□□□□□ -0.65
Lig3-201ENSMUST00000021039 Ppargc1bQ8VHJ7 1014 aa10.97□□□□□ -0.65
Lig3-201ENSMUST00000021039 Rsph4aQ8BYM7 716 aa10.97□□□□□ -0.65
Lig3-201ENSMUST00000021039 Ccnb3Q810T2 1396 aa10.96□□□□□ -0.65
Lig3-201ENSMUST00000021039 Rgl3Q3UYI5 709 aa10.96□□□□□ -0.65
Lig3-201ENSMUST00000021039 Mroh3A0A1D5RM54 893 aa10.96□□□□□ -0.65
Lig3-201ENSMUST00000021039 DiexfQ8BTT6 772 aaKnown RBP10.96□□□□□ -0.65
Lig3-201ENSMUST00000021039 PtprkP35822 1457 aa10.96□□□□□ -0.66
Lig3-201ENSMUST00000021039 Map4P27546 1125 aaKnown RBP10.96□□□□□ -0.66
Lig3-201ENSMUST00000021039 Cabp1Q9JLK7 227 aa10.95□□□□□ -0.66
Lig3-201ENSMUST00000021039 EprsQ8CGC7 1512 aaKnown RBP10.95□□□□□ -0.66
Lig3-201ENSMUST00000021039 Gm14025A2AP89 1413 aa10.95□□□□□ -0.66
Lig3-201ENSMUST00000021039 NeflP08551 543 aa10.95□□□□□ -0.66
Lig3-201ENSMUST00000021039 Plekhh2Q8C115 1491 aa10.95□□□□□ -0.66
Lig3-201ENSMUST00000021039 SynmQ70IV5 1561 aa10.94□□□□□ -0.66
Lig3-201ENSMUST00000021039 Sart1Q9Z315 806 aaKnown RBP10.94□□□□□ -0.66
Lig3-201ENSMUST00000021039 Stk24Q99KH8 431 aa10.93□□□□□ -0.66
Lig3-201ENSMUST00000021039 ClspnQ80YR7 1315 aa10.92□□□□□ -0.66
Lig3-201ENSMUST00000021039 Srpk2O54781 681 aaKnown RBP10.92□□□□□ -0.66
Lig3-201ENSMUST00000021039 IqubQ8CDK3 788 aa10.92□□□□□ -0.66
Lig3-201ENSMUST00000021039 Nlrp6Q91WS2 869 aa10.92□□□□□ -0.66
Lig3-201ENSMUST00000021039 Grin2aP35436 1464 aa10.92□□□□□ -0.66
Lig3-201ENSMUST00000021039 TchhA0A0B4J1F9 1599 aa10.91□□□□□ -0.66
Lig3-201ENSMUST00000021039 MlecQ6ZQI3 291 aaKnown RBP10.91□□□□□ -0.66
Lig3-201ENSMUST00000021039 Cux1P53564 1515 aa10.91□□□□□ -0.66
Lig3-201ENSMUST00000021039 Arhgap31A6X8Z5 1425 aa10.91□□□□□ -0.66
Lig3-201ENSMUST00000021039 AqrQ8CFQ3 1481 aaKnown RBP10.9□□□□□ -0.66
Lig3-201ENSMUST00000021039 Prdm10Q3UTQ7 1184 aa10.9□□□□□ -0.67
Lig3-201ENSMUST00000021039 Kif3bQ61771 747 aa10.89□□□□□ -0.67
Lig3-201ENSMUST00000021039 Kdm2aP59997 1161 aa10.89□□□□□ -0.67
Lig3-201ENSMUST00000021039 TnnQ80Z71 1560 aa10.88□□□□□ -0.67
Lig3-201ENSMUST00000021039 Gm20521D3Z5F7 333 aa10.88□□□□□ -0.67
Lig3-201ENSMUST00000021039 Nop58Q6DFW4 536 aaKnown RBP10.88□□□□□ -0.67
Lig3-201ENSMUST00000021039 Ccdc141E9Q8Q6 1531 aa10.87□□□□□ -0.67
Lig3-201ENSMUST00000021039 UacaQ8CGB3 1411 aa10.87□□□□□ -0.67
Lig3-201ENSMUST00000021039 Nup155Q99P88 1391 aaKnown RBP10.86□□□□□ -0.67
Lig3-201ENSMUST00000021039 Eif5bQ05D44 1216 aaKnown RBP10.86□□□□□ -0.67
Lig3-201ENSMUST00000021039 Grwd1Q810D6 446 aaKnown RBP10.86□□□□□ -0.67
Lig3-201ENSMUST00000021039 Kif21aQ9QXL2 1672 aa10.86□□□□□ -0.67
Lig3-201ENSMUST00000021039 Tnnt3Q9QZ47 272 aa10.86□□□□□ -0.67
Lig3-201ENSMUST00000021039 Igf1rQ60751 1373 aa10.85□□□□□ -0.67
Lig3-201ENSMUST00000021039 Tdrd9Q14BI7 1383 aa10.85□□□□□ -0.67
Lig3-201ENSMUST00000021039 Pkd2O35245 966 aa10.84□□□□□ -0.67
Lig3-201ENSMUST00000021039 Neo1P97798 1493 aa10.83□□□□□ -0.67
Lig3-201ENSMUST00000021039 Trak1Q6PD31 939 aa10.83□□□□□ -0.68
Lig3-201ENSMUST00000021039 Mphosph9A6H5Y1 991 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 122.2 ms