RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 SMIM2Q9BVW6 85 aa6.27□□□□□ -1.41
SCARB2-225ENST00000640900 DNAH2Q9P225 4427 aa6.26□□□□□ -1.41
SCARB2-225ENST00000640900 I3L3M4 83 aa6.26□□□□□ -1.41
SCARB2-225ENST00000640900 K7EMI3 77 aa6.26□□□□□ -1.41
SCARB2-225ENST00000640900 ESDP10768 282 aa6.26□□□□□ -1.41
SCARB2-225ENST00000640900 Q0VG73 95 aa6.26□□□□□ -1.41
SCARB2-225ENST00000640900 IQCJQ1A5X6 159 aa6.26□□□□□ -1.41
SCARB2-225ENST00000640900 ZFAND6Q6FIF0 208 aa6.26□□□□□ -1.41
SCARB2-225ENST00000640900 Q8N8P6 123 aa6.26□□□□□ -1.41
SCARB2-225ENST00000640900 URB1-AS1Q96HZ7 61 aa6.26□□□□□ -1.41
SCARB2-225ENST00000640900 UPK3BQ9BT76 320 aa6.26□□□□□ -1.41
SCARB2-225ENST00000640900 TRBV6-8A0A0A6YYG3 113 aa6.25□□□□□ -1.41
SCARB2-225ENST00000640900 NUDT3O95989 172 aa6.25□□□□□ -1.41
SCARB2-225ENST00000640900 TMEM97Q5BJF2 176 aa6.25□□□□□ -1.41
SCARB2-225ENST00000640900 LELP1Q5T871 98 aa6.25□□□□□ -1.41
SCARB2-225ENST00000640900 CHCHD7Q9BUK0 85 aa6.25□□□□□ -1.41
SCARB2-225ENST00000640900 MAP1LC3AQ9H492 121 aa6.25□□□□□ -1.41
SCARB2-225ENST00000640900 NXT2Q9NPJ8 142 aaKnown RBP6.25□□□□□ -1.41
SCARB2-225ENST00000640900 MRPS16Q9Y3D3 137 aaKnown RBP6.25□□□□□ -1.41
SCARB2-225ENST00000640900 LINC00588Q9Y4M8 146 aa6.25□□□□□ -1.41
SCARB2-225ENST00000640900 IGHV3-38A0A0C4DH36 116 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 TCAPO15273 167 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 HIST1H2BKO60814 126 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 HIST1H2BJP06899 126 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 HIST1H2BOP23527 126 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 HIST1H2BBP33778 126 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 IFI27P40305 119 aaPredicted RBP6.24□□□□□ -1.41
SCARB2-225ENST00000640900 HIST1H2BDP58876 126 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 LINC00310P59036 64 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 HIST1H2BCP62807 126 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 HIST2H2BEQ16778 126 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 COA6Q5JTJ3 125 aaKnown RBP6.24□□□□□ -1.41
SCARB2-225ENST00000640900 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.24□□□□□ -1.41
SCARB2-225ENST00000640900 HIST1H2BHQ93079 126 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 HIST1H2BNQ99877 126 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 HIST1H2BMQ99879 126 aa6.24□□□□□ -1.41
SCARB2-225ENST00000640900 PMCHP20382 165 aa6.23□□□□□ -1.41
SCARB2-225ENST00000640900 COTL1Q14019 142 aa6.23□□□□□ -1.41
SCARB2-225ENST00000640900 KMT2CQ8NEZ4 4911 aaKnown RBP6.22□□□□□ -1.41
SCARB2-225ENST00000640900 IGHV1-24A0A0C4DH33 117 aa6.22□□□□□ -1.41
SCARB2-225ENST00000640900 LOC389332A0A1B0GUA5 103 aa6.22□□□□□ -1.41
SCARB2-225ENST00000640900 H7C423 109 aa6.22□□□□□ -1.41
SCARB2-225ENST00000640900 LGALS9CQ6DKI2 356 aa6.22□□□□□ -1.41
SCARB2-225ENST00000640900 NIT1Q86X76 327 aa6.22□□□□□ -1.41
SCARB2-225ENST00000640900 KIR2DL4Q99706 377 aa6.22□□□□□ -1.41
SCARB2-225ENST00000640900 DNAH17Q9UFH2 4485 aa6.22□□□□□ -1.41
SCARB2-225ENST00000640900 A0A096LNJ9 63 aa6.21□□□□□ -1.42
SCARB2-225ENST00000640900 LINC00614P0C842 121 aa6.21□□□□□ -1.42
SCARB2-225ENST00000640900 DNAH10OSP0CZ25 163 aa6.21□□□□□ -1.42
SCARB2-225ENST00000640900 CCL18P55774 89 aa6.21□□□□□ -1.42
SCARB2-225ENST00000640900 MRPL52Q86TS9 123 aaKnown RBP6.21□□□□□ -1.42
SCARB2-225ENST00000640900 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.21□□□□□ -1.42
SCARB2-225ENST00000640900 C20orf203Q8NBC4 194 aa6.21□□□□□ -1.42
SCARB2-225ENST00000640900 FAM104AQ969W3 186 aa6.21□□□□□ -1.42
SCARB2-225ENST00000640900 CHCHD1Q96BP2 118 aaKnown RBP6.21□□□□□ -1.42
SCARB2-225ENST00000640900 TMEM243Q9BU79 118 aa6.21□□□□□ -1.42
SCARB2-225ENST00000640900 DNAH10Q8IVF4 4471 aa6.21□□□□□ -1.42
SCARB2-225ENST00000640900 TRBV25-1A0A075B6N4 114 aa6.2□□□□□ -1.42
SCARB2-225ENST00000640900 A0A1B0GUV1 79 aa6.2□□□□□ -1.42
SCARB2-225ENST00000640900 C1orf196B1AJZ1 125 aa6.2□□□□□ -1.42
SCARB2-225ENST00000640900 RAB5BP61020 215 aa6.2□□□□□ -1.42
SCARB2-225ENST00000640900 LAGE3Q14657 143 aa6.2□□□□□ -1.42
SCARB2-225ENST00000640900 ORMDL2Q53FV1 153 aa6.2□□□□□ -1.42
SCARB2-225ENST00000640900 LINC01556Q5JQF7 62 aa6.2□□□□□ -1.42
SCARB2-225ENST00000640900 PRSS3P2Q8NHM4 247 aa6.2□□□□□ -1.42
SCARB2-225ENST00000640900 TIMM21Q9BVV7 248 aa6.2□□□□□ -1.42
SCARB2-225ENST00000640900 AP5S1Q9NUS5 200 aa6.2□□□□□ -1.42
SCARB2-225ENST00000640900 CSDC2Q9Y534 153 aaKnown RBP6.2□□□□□ -1.42
SCARB2-225ENST00000640900 HYDINQ4G0P3 5121 aa6.19□□□□□ -1.42
SCARB2-225ENST00000640900 NUPR1O60356 82 aa6.19□□□□□ -1.42
SCARB2-225ENST00000640900 AMTP48728 403 aa6.19□□□□□ -1.42
SCARB2-225ENST00000640900 WFDC10BQ8IUB3 73 aa6.19□□□□□ -1.42
SCARB2-225ENST00000640900 Q8N3U1 123 aa6.19□□□□□ -1.42
SCARB2-225ENST00000640900 DEFB104AQ8WTQ1 72 aa6.19□□□□□ -1.42
SCARB2-225ENST00000640900 LINC00476Q8WZB0 136 aa6.19□□□□□ -1.42
SCARB2-225ENST00000640900 PYGO1Q9Y3Y4 419 aa6.19□□□□□ -1.42
SCARB2-225ENST00000640900 FRAS1Q86XX4 4008 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 TRAV8-6A0A0B4J262 113 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 IGIPA6NJ69 53 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 K7EP13 123 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 SERF1AO75920 110 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 NPSP0C0P6 89 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 FCER1GP30273 86 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 PKIAP61925 76 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 PDZD11Q5EBL8 140 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 FA2HQ7L5A8 372 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 TOMM6Q96B49 74 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 Q9H8V8 135 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 UBE2D4Q9Y2X8 147 aa6.18□□□□□ -1.42
SCARB2-225ENST00000640900 FAT2Q9NYQ8 4349 aa6.17□□□□□ -1.42
SCARB2-225ENST00000640900 LINC01549A6NIU2 74 aa6.17□□□□□ -1.42
SCARB2-225ENST00000640900 SIVA1O15304 175 aa6.17□□□□□ -1.42
SCARB2-225ENST00000640900 FGF6P10767 208 aa6.17□□□□□ -1.42
SCARB2-225ENST00000640900 ZNF25P17030 456 aaPredicted RBP6.17□□□□□ -1.42
SCARB2-225ENST00000640900 G0S2P27469 103 aa6.17□□□□□ -1.42
SCARB2-225ENST00000640900 RPL39P62891 51 aaKnown RBP6.17□□□□□ -1.42
SCARB2-225ENST00000640900 MRPS36P82909 103 aaKnown RBP6.17□□□□□ -1.42
SCARB2-225ENST00000640900 MPV17L2Q567V2 206 aa6.17□□□□□ -1.42
SCARB2-225ENST00000640900 BAGE3Q86Y29 109 aa6.17□□□□□ -1.42
SCARB2-225ENST00000640900 CHCHD5Q9BSY4 110 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms