RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 MANBALQ9NQG1 85 aa12.48□□□□□ -0.41
GABRD-216ENST00000640688 RPS20P60866 119 aaKnown RBP12.47□□□□□ -0.41
GABRD-216ENST00000640688 C9orf62Q8N4C0 152 aa12.47□□□□□ -0.41
GABRD-216ENST00000640688 PGLYRP4Q96LB8 373 aa12.47□□□□□ -0.41
GABRD-216ENST00000640688 NIT2Q9NQR4 276 aa12.47□□□□□ -0.41
GABRD-216ENST00000640688 AP5S1Q9NUS5 200 aa12.47□□□□□ -0.41
GABRD-216ENST00000640688 TRBV20OR9-2A0A075B6H5 130 aa12.46□□□□□ -0.41
GABRD-216ENST00000640688 NTF3P20783 257 aa12.46□□□□□ -0.41
GABRD-216ENST00000640688 DPH3P1Q9H4G8 78 aa12.46□□□□□ -0.41
GABRD-216ENST00000640688 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.45□□□□□ -0.42
GABRD-216ENST00000640688 IGKV3OR2-268A0A0C4DH90 116 aa12.45□□□□□ -0.42
GABRD-216ENST00000640688 GAGE12HA6NDE8 117 aa12.45□□□□□ -0.42
GABRD-216ENST00000640688 PHOX2AO14813 284 aa12.45□□□□□ -0.42
GABRD-216ENST00000640688 F2Z2F3 143 aa12.44□□□□□ -0.42
GABRD-216ENST00000640688 UBE2L6O14933 153 aa12.44□□□□□ -0.42
GABRD-216ENST00000640688 AMTP48728 403 aa12.44□□□□□ -0.42
GABRD-216ENST00000640688 GNG4P50150 75 aa12.44□□□□□ -0.42
GABRD-216ENST00000640688 SULT1A2P50226 295 aa12.44□□□□□ -0.42
GABRD-216ENST00000640688 RNF185Q96GF1 192 aa12.44□□□□□ -0.42
GABRD-216ENST00000640688 PLAC8Q9NZF1 115 aa12.44□□□□□ -0.42
GABRD-216ENST00000640688 LRP2P98164 4655 aa12.43□□□□□ -0.42
GABRD-216ENST00000640688 TRAV1-1A0A0B4J248 108 aa12.43□□□□□ -0.42
GABRD-216ENST00000640688 TRAV26-2A0A0B4J265 109 aa12.43□□□□□ -0.42
GABRD-216ENST00000640688 IFNA1P01562 189 aa12.43□□□□□ -0.42
GABRD-216ENST00000640688 TRGC1P0CF51 173 aa12.43□□□□□ -0.42
GABRD-216ENST00000640688 COX6A2Q02221 97 aa12.43□□□□□ -0.42
GABRD-216ENST00000640688 COTL1Q14019 142 aa12.43□□□□□ -0.42
GABRD-216ENST00000640688 HIGD2BQ4VC39 106 aa12.43□□□□□ -0.42
GABRD-216ENST00000640688 ODF1Q14990 250 aa12.42□□□□□ -0.42
GABRD-216ENST00000640688 WDR73Q6P4I2 378 aa12.42□□□□□ -0.42
GABRD-216ENST00000640688 SLC51BQ86UW2 128 aa12.42□□□□□ -0.42
GABRD-216ENST00000640688 GATD1Q8NB37 220 aa12.42□□□□□ -0.42
GABRD-216ENST00000640688 PRSS3P2Q8NHM4 247 aa12.42□□□□□ -0.42
GABRD-216ENST00000640688 EIF5AL1Q6IS14 154 aaKnown RBP12.41□□□□□ -0.42
GABRD-216ENST00000640688 NUDT10Q8NFP7 164 aa12.41□□□□□ -0.42
GABRD-216ENST00000640688 SMIM12Q96EX1 92 aa12.41□□□□□ -0.42
GABRD-216ENST00000640688 NUDT11Q96G61 164 aa12.41□□□□□ -0.42
GABRD-216ENST00000640688 XKRY2A2RUG3 117 aa12.4□□□□□ -0.42
GABRD-216ENST00000640688 CTRLP40313 264 aa12.4□□□□□ -0.42
GABRD-216ENST00000640688 MEF2BQ02080 365 aaPredicted RBP12.4□□□□□ -0.42
GABRD-216ENST00000640688 TWIST1Q15672 202 aa12.4□□□□□ -0.42
GABRD-216ENST00000640688 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.42
GABRD-216ENST00000640688 MED9Q9NWA0 146 aa12.4□□□□□ -0.42
GABRD-216ENST00000640688 IGKV2-24A0A0C4DH68 120 aa12.39□□□□□ -0.43
GABRD-216ENST00000640688 FOXA3P55318 350 aaPredicted RBP12.39□□□□□ -0.43
GABRD-216ENST00000640688 MAJINQ3KP22 176 aa12.39□□□□□ -0.43
GABRD-216ENST00000640688 CHCHD10Q8WYQ3 142 aaPredicted RBP12.39□□□□□ -0.43
GABRD-216ENST00000640688 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.38□□□□□ -0.43
GABRD-216ENST00000640688 IGKV2-29A2NJV5 120 aaPredicted RBP12.38□□□□□ -0.43
GABRD-216ENST00000640688 RPS10P46783 165 aaKnown RBP12.38□□□□□ -0.43
GABRD-216ENST00000640688 CNFNQ9BYD5 112 aa12.38□□□□□ -0.43
GABRD-216ENST00000640688 RNASE7Q9H1E1 156 aaKnown RBP12.38□□□□□ -0.43
GABRD-216ENST00000640688 RNF213Q63HN8 5207 aa12.38□□□□□ -0.43
GABRD-216ENST00000640688 PDE6DO43924 150 aa12.37□□□□□ -0.43
GABRD-216ENST00000640688 NDUFS6O75380 124 aaKnown RBP12.37□□□□□ -0.43
GABRD-216ENST00000640688 C7orf33Q8WU49 177 aa12.37□□□□□ -0.43
GABRD-216ENST00000640688 GTSF1Q8WW33 167 aa12.37□□□□□ -0.43
GABRD-216ENST00000640688 K7EN84 100 aa12.36□□□□□ -0.43
GABRD-216ENST00000640688 CFAP161Q6P656 301 aa12.36□□□□□ -0.43
GABRD-216ENST00000640688 LYPD6BQ8NI32 183 aa12.36□□□□□ -0.43
GABRD-216ENST00000640688 BCL2P10415 239 aa12.35□□□□□ -0.43
GABRD-216ENST00000640688 PRR3P79522 188 aaKnown RBP12.35□□□□□ -0.43
GABRD-216ENST00000640688 RNASEKQ6P5S7 137 aaKnown RBP12.35□□□□□ -0.43
GABRD-216ENST00000640688 STPG4Q8N801 248 aa12.35□□□□□ -0.43
GABRD-216ENST00000640688 A0A096LNI7 61 aa12.34□□□□□ -0.43
GABRD-216ENST00000640688 GVQW2A0A096LPI5 108 aaPredicted RBP12.34□□□□□ -0.43
GABRD-216ENST00000640688 FOXI1Q12951 378 aa12.34□□□□□ -0.43
GABRD-216ENST00000640688 AMMECR1LQ6DCA0 310 aa12.34□□□□□ -0.43
GABRD-216ENST00000640688 RPP21Q9H633 154 aaKnown RBP12.34□□□□□ -0.43
GABRD-216ENST00000640688 TEX46H3BTG2 121 aa12.33□□□□□ -0.44
GABRD-216ENST00000640688 FGF6P10767 208 aa12.33□□□□□ -0.44
GABRD-216ENST00000640688 OCC1Q8TAD7 63 aa12.33□□□□□ -0.44
GABRD-216ENST00000640688 LINC00526Q96FQ7 95 aa12.33□□□□□ -0.44
GABRD-216ENST00000640688 LINC01600Q96MT4 127 aa12.33□□□□□ -0.44
GABRD-216ENST00000640688 BIN3Q9NQY0 253 aa12.33□□□□□ -0.44
GABRD-216ENST00000640688 ALKAL2Q6UX46 152 aa12.32□□□□□ -0.44
GABRD-216ENST00000640688 FAM231BA6NCW3 169 aa12.31□□□□□ -0.44
GABRD-216ENST00000640688 SDHAF1A6NFY7 115 aa12.31□□□□□ -0.44
GABRD-216ENST00000640688 GAS8-AS1O95177 125 aa12.31□□□□□ -0.44
GABRD-216ENST00000640688 NCR2O95944 276 aa12.31□□□□□ -0.44
GABRD-216ENST00000640688 APCSP02743 223 aa12.31□□□□□ -0.44
GABRD-216ENST00000640688 XCL1P47992 114 aa12.3□□□□□ -0.44
GABRD-216ENST00000640688 H7C423 109 aa12.28□□□□□ -0.44
GABRD-216ENST00000640688 TEX261Q6UWH6 196 aa12.28□□□□□ -0.44
GABRD-216ENST00000640688 OR5A1Q8NGJ0 315 aa12.28□□□□□ -0.44
GABRD-216ENST00000640688 CCL25O15444 150 aa12.27□□□□□ -0.45
GABRD-216ENST00000640688 RAB14P61106 215 aa12.27□□□□□ -0.45
GABRD-216ENST00000640688 LINC00959A0A1B0GUT2 108 aa12.26□□□□□ -0.45
GABRD-216ENST00000640688 I3L3M4 83 aa12.25□□□□□ -0.45
GABRD-216ENST00000640688 TSHBP01222 138 aa12.25□□□□□ -0.45
GABRD-216ENST00000640688 ESDP10768 282 aa12.25□□□□□ -0.45
GABRD-216ENST00000640688 PMCHP20382 165 aa12.25□□□□□ -0.45
GABRD-216ENST00000640688 SMIM15Q7Z3B0 74 aa12.25□□□□□ -0.45
GABRD-216ENST00000640688 TMEM242Q9NWH2 141 aa12.25□□□□□ -0.45
GABRD-216ENST00000640688 A0A0J9YXV3 536 aa12.24□□□□□ -0.45
GABRD-216ENST00000640688 ZNF25P17030 456 aaPredicted RBP12.24□□□□□ -0.45
GABRD-216ENST00000640688 KRTAP10-8P60410 259 aa12.24□□□□□ -0.45
GABRD-216ENST00000640688 BLOC1S1P78537 153 aa12.24□□□□□ -0.45
GABRD-216ENST00000640688 CARD19Q96LW7 228 aa12.24□□□□□ -0.45
GABRD-216ENST00000640688 IGHV1-58A0A0C4DH39 117 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms