RNA–Protein interactions for RNA: ENST00000640431.1

PAX6-271, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-271ENST00000640431 FAM231CP0DMU5 169 aa11.21□□□□□ -0.62
PAX6-271ENST00000640431 SRSF9Q13242 221 aaKnown RBP eCLIP11.21□□□□□ -0.62
PAX6-271ENST00000640431 WFDC2Q14508 124 aa11.21□□□□□ -0.62
PAX6-271ENST00000640431 TMEM170BQ5T4T1 132 aa11.21□□□□□ -0.62
PAX6-271ENST00000640431 C3orf56Q8N813 242 aa11.21□□□□□ -0.62
PAX6-271ENST00000640431 OPRPNQ99935 248 aaPredicted RBP11.21□□□□□ -0.62
PAX6-271ENST00000640431 CITED2Q99967 270 aaPredicted RBP11.21□□□□□ -0.62
PAX6-271ENST00000640431 TRGV11A0A075B6L2 103 aa11.2□□□□□ -0.62
PAX6-271ENST00000640431 A0A0J9YY99 117 aa11.2□□□□□ -0.62
PAX6-271ENST00000640431 F8W1H4 67 aa11.2□□□□□ -0.62
PAX6-271ENST00000640431 KHDC1LQ5JSQ8 128 aa11.2□□□□□ -0.62
PAX6-271ENST00000640431 KNCNA6PVL3 124 aa11.19□□□□□ -0.62
PAX6-271ENST00000640431 UBE2D1P51668 147 aa11.19□□□□□ -0.62
PAX6-271ENST00000640431 SLURP1P55000 103 aa11.19□□□□□ -0.62
PAX6-271ENST00000640431 COTL1Q14019 142 aa11.19□□□□□ -0.62
PAX6-271ENST00000640431 DEFB136Q30KP8 78 aa11.19□□□□□ -0.62
PAX6-271ENST00000640431 PGPEP1Q9NXJ5 209 aa11.19□□□□□ -0.62
PAX6-271ENST00000640431 TMEM238LA0A1B0GVL6 79 aa11.19□□□□□ -0.62
PAX6-271ENST00000640431 A6NJY4 79 aa11.19□□□□□ -0.62
PAX6-271ENST00000640431 NFE4Q86UQ8 179 aa11.18□□□□□ -0.62
PAX6-271ENST00000640431 I3L3M4 83 aa11.18□□□□□ -0.62
PAX6-271ENST00000640431 C20orf203Q8NBC4 194 aa11.18□□□□□ -0.62
PAX6-271ENST00000640431 AMELXQ99217 191 aa11.18□□□□□ -0.62
PAX6-271ENST00000640431 SPANXB1Q9NS25 103 aaPredicted RBP11.18□□□□□ -0.62
PAX6-271ENST00000640431 DEFB131AP59861 70 aa11.17□□□□□ -0.62
PAX6-271ENST00000640431 MTURNQ8N3F0 131 aa11.17□□□□□ -0.62
PAX6-271ENST00000640431 DUX3Q96PT4 197 aa11.17□□□□□ -0.62
PAX6-271ENST00000640431 MRPL16Q9NX20 251 aaKnown RBP11.17□□□□□ -0.62
PAX6-271ENST00000640431 PRO0461Q9UI25 63 aa11.17□□□□□ -0.62
PAX6-271ENST00000640431 HTN1P15515 57 aa11.16□□□□□ -0.62
PAX6-271ENST00000640431 KRTAP21-3Q3LHN1 58 aa11.16□□□□□ -0.62
PAX6-271ENST00000640431 CITED1Q99966 193 aa11.16□□□□□ -0.62
PAX6-271ENST00000640431 RBMY1BA6NDE4 496 aaKnown RBP11.16□□□□□ -0.62
PAX6-271ENST00000640431 RBMY1EA6NEQ0 496 aaKnown RBP11.16□□□□□ -0.62
PAX6-271ENST00000640431 ADARB2-AS1A8MUL3 147 aa11.16□□□□□ -0.62
PAX6-271ENST00000640431 J3QQQ9 107 aa11.16□□□□□ -0.62
PAX6-271ENST00000640431 TSPAN13O95857 204 aa11.16□□□□□ -0.62
PAX6-271ENST00000640431 RBMY1DP0C7P1 496 aaKnown RBP11.16□□□□□ -0.62
PAX6-271ENST00000640431 SPATA3Q8NHX4 192 aa11.16□□□□□ -0.62
PAX6-271ENST00000640431 IGHV3-73A0A0B4J1V6 119 aa11.15□□□□□ -0.62
PAX6-271ENST00000640431 A8MTW9 85 aa11.15□□□□□ -0.62
PAX6-271ENST00000640431 IGHV3-30P01768 117 aa11.15□□□□□ -0.62
PAX6-271ENST00000640431 PRM2P04554 102 aa11.15□□□□□ -0.62
PAX6-271ENST00000640431 IGHV3-30-5P0DP03 117 aa11.15□□□□□ -0.62
PAX6-271ENST00000640431 GAGE13Q4V321 117 aa11.15□□□□□ -0.62
PAX6-271ENST00000640431 SH2D6Q7Z4S9 175 aa11.15□□□□□ -0.62
PAX6-271ENST00000640431 SLC25A29Q8N8R3 303 aa11.15□□□□□ -0.62
PAX6-271ENST00000640431 IGLV4-3A0A075B6K6 122 aa11.14□□□□□ -0.63
PAX6-271ENST00000640431 TMEM223A0PJW6 202 aa11.14□□□□□ -0.63
PAX6-271ENST00000640431 H3BMM0 161 aa11.14□□□□□ -0.63
PAX6-271ENST00000640431 APOMO95445 188 aa11.14□□□□□ -0.63
PAX6-271ENST00000640431 EDA2RQ9HAV5 297 aa11.14□□□□□ -0.63
PAX6-271ENST00000640431 LGALS3P17931 250 aaKnown RBP11.14□□□□□ -0.63
PAX6-271ENST00000640431 ETDBQ3ZM63 59 aa11.14□□□□□ -0.63
PAX6-271ENST00000640431 ZNF22P17026 224 aaPredicted RBP11.13□□□□□ -0.63
PAX6-271ENST00000640431 NDUFA11Q86Y39 141 aa11.13□□□□□ -0.63
PAX6-271ENST00000640431 NACAE9PAV3 2078 aa11.13□□□□□ -0.63
PAX6-271ENST00000640431 LEPROTO15243 131 aa11.13□□□□□ -0.63
PAX6-271ENST00000640431 TMEM61Q8N0U2 210 aa11.13□□□□□ -0.63
PAX6-271ENST00000640431 RHODO00212 210 aa11.12□□□□□ -0.63
PAX6-271ENST00000640431 SFTA2Q6UW10 78 aa11.12□□□□□ -0.63
PAX6-271ENST00000640431 FAM104AQ969W3 186 aa11.12□□□□□ -0.63
PAX6-271ENST00000640431 MGAM2Q2M2H8 2515 aa11.12□□□□□ -0.63
PAX6-271ENST00000640431 NOTCH3Q9UM47 2321 aa11.12□□□□□ -0.63
PAX6-271ENST00000640431 A0A0J9YXV3 536 aa11.11□□□□□ -0.63
PAX6-271ENST00000640431 CFC1BP0CG36 223 aa11.11□□□□□ -0.63
PAX6-271ENST00000640431 CFC1P0CG37 223 aa11.11□□□□□ -0.63
PAX6-271ENST00000640431 UBE2D3P61077 147 aa11.11□□□□□ -0.63
PAX6-271ENST00000640431 UBE2D2P62837 147 aa11.11□□□□□ -0.63
PAX6-271ENST00000640431 SPAG8Q99932 426 aaPredicted RBP11.11□□□□□ -0.63
PAX6-271ENST00000640431 VCX2Q9H322 139 aa11.11□□□□□ -0.63
PAX6-271ENST00000640431 NBEAL1Q6ZS30 2694 aa11.11□□□□□ -0.63
PAX6-271ENST00000640431 IGHV3-64A0A075B6Q5 118 aa11.11□□□□□ -0.63
PAX6-271ENST00000640431 DLX4Q92988 240 aaPredicted RBP11.11□□□□□ -0.63
PAX6-271ENST00000640431 TRAV2A0A0B4J234 112 aa11.1□□□□□ -0.63
PAX6-271ENST00000640431 LOC107984156A0A0G2JMH3 177 aa11.1□□□□□ -0.63
PAX6-271ENST00000640431 M0R2P5 195 aa11.1□□□□□ -0.63
PAX6-271ENST00000640431 SHISA2Q6UWI4 295 aa11.1□□□□□ -0.63
PAX6-271ENST00000640431 ARL17AQ8IVW1 177 aa11.1□□□□□ -0.63
PAX6-271ENST00000640431 C4orf3Q8WVX3 66 aa11.1□□□□□ -0.63
PAX6-271ENST00000640431 PEMTQ9UBM1 199 aa11.1□□□□□ -0.63
PAX6-271ENST00000640431 Q9UF83 564 aa11.1□□□□□ -0.63
PAX6-271ENST00000640431 CFAP126Q5VTH2 177 aa11.09□□□□□ -0.63
PAX6-271ENST00000640431 Q6ZSN1 163 aa11.09□□□□□ -0.63
PAX6-271ENST00000640431 MAP6D1Q9H9H5 199 aa11.09□□□□□ -0.63
PAX6-271ENST00000640431 PYGO1Q9Y3Y4 419 aa11.09□□□□□ -0.63
PAX6-271ENST00000640431 A8MWV9 139 aa11.09□□□□□ -0.63
PAX6-271ENST00000640431 PSMB2P49721 201 aa11.09□□□□□ -0.63
PAX6-271ENST00000640431 SMCPP49901 116 aaPredicted RBP11.09□□□□□ -0.63
PAX6-271ENST00000640431 ZNF415Q09FC8 603 aa11.09□□□□□ -0.63
PAX6-271ENST00000640431 TSSC4Q9Y5U2 329 aaPredicted RBP11.09□□□□□ -0.63
PAX6-271ENST00000640431 CEMP1Q6PRD7 247 aaPredicted RBP11.08□□□□□ -0.64
PAX6-271ENST00000640431 TNFRSF18Q9Y5U5 241 aa11.08□□□□□ -0.64
PAX6-271ENST00000640431 INSL3P51460 131 aa11.08□□□□□ -0.64
PAX6-271ENST00000640431 RAX2Q96IS3 184 aa11.08□□□□□ -0.64
PAX6-271ENST00000640431 NOTCH1P46531 2555 aa11.07□□□□□ -0.64
PAX6-271ENST00000640431 J3QR89 54 aa11.07□□□□□ -0.64
PAX6-271ENST00000640431 PIK3CD-AS1Q5SR53 167 aa11.07□□□□□ -0.64
PAX6-271ENST00000640431 C10orf126Q8N4M7 172 aa11.07□□□□□ -0.64
PAX6-271ENST00000640431 C11orf72Q8NBR9 251 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms