RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 CHD7Q9P2D1 2997 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 EPOPA6NHQ4 379 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 E7EQL1 145 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 NDPQ00604 133 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 C9orf66Q5T8R8 295 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 MINOS1Q5TGZ0 78 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 LYPD2Q6UXB3 125 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 DYNLRB2Q8TF09 96 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 LINC00467Q9BRT7 94 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 DEFB127Q9H1M4 99 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 DPM3Q9P2X0 92 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 MINOS1-NBL1R4GNA1 71 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 NACAE9PAV3 2078 aa4.04□□□□□ -1.76
POLR2B-213ENST00000639658 NDUFS5O43920 106 aa4.04□□□□□ -1.76
POLR2B-213ENST00000639658 SEM1Q6ZVN7 128 aa4.04□□□□□ -1.76
POLR2B-213ENST00000639658 DEFB119Q8N690 84 aa4.04□□□□□ -1.76
POLR2B-213ENST00000639658 MOB4Q9Y3A3 225 aa4.04□□□□□ -1.76
POLR2B-213ENST00000639658 INTS1Q8N201 2190 aaKnown RBP4.04□□□□□ -1.76
POLR2B-213ENST00000639658 IGHV7-81A0A0B4J1V7 117 aa4.04□□□□□ -1.76
POLR2B-213ENST00000639658 IGHV3-72A0A0B4J1Y9 119 aa4.04□□□□□ -1.76
POLR2B-213ENST00000639658 IGKV3D-7A0A0C4DH55 119 aa4.04□□□□□ -1.76
POLR2B-213ENST00000639658 LCE6AA0A183 80 aa4.04□□□□□ -1.76
POLR2B-213ENST00000639658 A8MTW9 85 aa4.04□□□□□ -1.76
POLR2B-213ENST00000639658 IGF1P05019 195 aa4.04□□□□□ -1.76
POLR2B-213ENST00000639658 CD28P10747 220 aa4.04□□□□□ -1.76
POLR2B-213ENST00000639658 RPL11P62913 178 aaKnown RBP4.04□□□□□ -1.76
POLR2B-213ENST00000639658 C15orf32Q32M92 178 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 C9orf129Q5T035 196 aaKnown RBP4.03□□□□□ -1.76
POLR2B-213ENST00000639658 DEFB108BQ8NET1 73 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 IGKV2-28A0A075B6P5 120 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 F8WEM9 126 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 NDUFA4O00483 81 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 GNRH2O43555 120 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 IGKV2D-28P01615 120 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 RBM3P98179 157 aaKnown RBP4.03□□□□□ -1.76
POLR2B-213ENST00000639658 DGAT2L7PQ6IED9 249 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 RANBP2P49792 3224 aaKnown RBP4.03□□□□□ -1.76
POLR2B-213ENST00000639658 SMIM1B2RUZ4 78 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 H3BUA1 57 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 PDE6GP18545 87 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 HOXD3P31249 432 aaPredicted RBP4.03□□□□□ -1.76
POLR2B-213ENST00000639658 C6orf223Q8N319 242 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 C14orf132Q9NPU4 83 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 ORMDL1Q9P0S3 153 aa4.03□□□□□ -1.76
POLR2B-213ENST00000639658 IGKV2-29A2NJV5 120 aaPredicted RBP4.02□□□□□ -1.77
POLR2B-213ENST00000639658 APELAP0DMC3 54 aa4.02□□□□□ -1.77
POLR2B-213ENST00000639658 IGHV4-38-2P0DP08 117 aa4.02□□□□□ -1.77
POLR2B-213ENST00000639658 Q6ZTC4 211 aa4.02□□□□□ -1.77
POLR2B-213ENST00000639658 RBM12B-AS1Q9P1G2 102 aa4.02□□□□□ -1.77
POLR2B-213ENST00000639658 A0A087WYN8 130 aa4.02□□□□□ -1.77
POLR2B-213ENST00000639658 TMEM256-PLSCR3K7ERE1 68 aa4.02□□□□□ -1.77
POLR2B-213ENST00000639658 CCL17Q92583 94 aa4.02□□□□□ -1.77
POLR2B-213ENST00000639658 CCL21O00585 134 aa4.01□□□□□ -1.77
POLR2B-213ENST00000639658 Q8N9W7 124 aa4.01□□□□□ -1.77
POLR2B-213ENST00000639658 LINC00588Q9Y4M8 146 aa4.01□□□□□ -1.77
POLR2B-213ENST00000639658 SDK2Q58EX2 2172 aa4.01□□□□□ -1.77
POLR2B-213ENST00000639658 LINC00337Q8N6G1 96 aa4.01□□□□□ -1.77
POLR2B-213ENST00000639658 CNEP1R1Q8N9A8 125 aa4.01□□□□□ -1.77
POLR2B-213ENST00000639658 UBL5Q9BZL1 73 aa4.01□□□□□ -1.77
POLR2B-213ENST00000639658 CRPP02741 224 aa4.01□□□□□ -1.77
POLR2B-213ENST00000639658 LMO4P61968 165 aa4.01□□□□□ -1.77
POLR2B-213ENST00000639658 IGHV3-64A0A075B6Q5 118 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 ADARB2-AS1A8MUL3 147 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 K7EMT4 169 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 IGHV4-31P0DP07 118 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 SMIM11BQ8TCY0 68 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 UBE2E2Q96LR5 201 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 Q9H8V8 135 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 CDKN2A-AS1Q9UH64 79 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 SPTBN5Q9NRC6 3674 aaKnown RBP4□□□□□ -1.77
POLR2B-213ENST00000639658 XIRP2A4UGR9 3374 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 LINC00242Q5T6M2 205 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 Q6ZQT0 140 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 Q6ZVQ6 151 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 MIR7-3HGQ8N6C7 128 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4□□□□□ -1.77
POLR2B-213ENST00000639658 ARHGAP32A7KAX9 2087 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 COL6A3P12111 3177 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 hDV103S1A0JD37 113 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 LPAL2Q16609 132 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 DEFB114Q30KQ6 69 aa4□□□□□ -1.77
POLR2B-213ENST00000639658 LY6HO94772 140 aa3.99□□□□□ -1.77
POLR2B-213ENST00000639658 FAM229BQ4G0N7 80 aa3.99□□□□□ -1.77
POLR2B-213ENST00000639658 CACNA1EQ15878 2313 aa3.99□□□□□ -1.77
POLR2B-213ENST00000639658 TRAV23DV6A0A075B6W5 121 aa3.99□□□□□ -1.77
POLR2B-213ENST00000639658 M0R378 163 aa3.99□□□□□ -1.77
POLR2B-213ENST00000639658 PRB4P10163 310 aaPredicted RBP3.99□□□□□ -1.77
POLR2B-213ENST00000639658 UBE2BP63146 152 aa3.99□□□□□ -1.77
POLR2B-213ENST00000639658 ECSCRQ19T08 205 aa3.99□□□□□ -1.77
POLR2B-213ENST00000639658 ENHOQ6UWT2 76 aa3.99□□□□□ -1.77
POLR2B-213ENST00000639658 Q9HAA7 133 aa3.99□□□□□ -1.77
POLR2B-213ENST00000639658 F5P12259 2224 aa3.99□□□□□ -1.77
POLR2B-213ENST00000639658 IGHV3OR16-12A0A075B7B8 117 aa3.98□□□□□ -1.77
POLR2B-213ENST00000639658 IGHV3-35A0A0C4DH35 117 aa3.98□□□□□ -1.77
POLR2B-213ENST00000639658 GRNP28799 593 aaKnown RBP3.98□□□□□ -1.77
POLR2B-213ENST00000639658 DAD1P61803 113 aa3.98□□□□□ -1.77
POLR2B-213ENST00000639658 BPESC1Q9GZL8 116 aa3.98□□□□□ -1.77
POLR2B-213ENST00000639658 IGHV1OR15-1A0A075B7D0 117 aa3.98□□□□□ -1.77
POLR2B-213ENST00000639658 TRBV6-4A0A1B0GX49 114 aa3.98□□□□□ -1.77
POLR2B-213ENST00000639658 LINC01547P58512 204 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms