RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 RNF183Q96D59 192 aa9.5□□□□□ -0.89
SCN8A-215ENST00000638820 OVOL2Q9BRP0 275 aa9.5□□□□□ -0.89
SCN8A-215ENST00000638820 LOC100131303A0A0U1RQF7 123 aa9.49□□□□□ -0.89
SCN8A-215ENST00000638820 PAX4O43316 350 aa9.49□□□□□ -0.89
SCN8A-215ENST00000638820 NMUP48645 174 aa9.49□□□□□ -0.89
SCN8A-215ENST00000638820 VCX2Q9H322 139 aa9.49□□□□□ -0.89
SCN8A-215ENST00000638820 TRBV10-1A0A0K0K1A3 114 aa9.49□□□□□ -0.89
SCN8A-215ENST00000638820 LYRM9A8MSI8 78 aa9.49□□□□□ -0.89
SCN8A-215ENST00000638820 PLAC8L1A1L4L8 177 aa9.49□□□□□ -0.89
SCN8A-215ENST00000638820 PRSS47A8MTI9 375 aa9.49□□□□□ -0.89
SCN8A-215ENST00000638820 ATP5G1P05496 136 aa9.49□□□□□ -0.89
SCN8A-215ENST00000638820 GYPEP15421 78 aa9.49□□□□□ -0.89
SCN8A-215ENST00000638820 TEX43Q6ZNM6 134 aa9.49□□□□□ -0.89
SCN8A-215ENST00000638820 TOMM6Q96B49 74 aa9.49□□□□□ -0.89
SCN8A-215ENST00000638820 LINC01549A6NIU2 74 aa9.48□□□□□ -0.89
SCN8A-215ENST00000638820 DPM2O94777 84 aa9.48□□□□□ -0.89
SCN8A-215ENST00000638820 RNASE13Q5GAN3 156 aaKnown RBP9.48□□□□□ -0.89
SCN8A-215ENST00000638820 CHCHD5Q9BSY4 110 aa9.48□□□□□ -0.89
SCN8A-215ENST00000638820 MRPL35Q9NZE8 188 aaKnown RBP9.48□□□□□ -0.89
SCN8A-215ENST00000638820 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
SCN8A-215ENST00000638820 IGKV3OR2-268A0A0C4DH90 116 aa9.48□□□□□ -0.89
SCN8A-215ENST00000638820 DEFA6Q01524 100 aa9.48□□□□□ -0.89
SCN8A-215ENST00000638820 PAPPA-AS1Q5QFB9 102 aa9.48□□□□□ -0.89
SCN8A-215ENST00000638820 SPATA12Q7Z6I5 190 aa9.48□□□□□ -0.89
SCN8A-215ENST00000638820 STPG4Q8N801 248 aa9.48□□□□□ -0.89
SCN8A-215ENST00000638820 TMEM262E9PQX1 116 aa9.47□□□□□ -0.89
SCN8A-215ENST00000638820 LGALS9CQ6DKI2 356 aa9.47□□□□□ -0.89
SCN8A-215ENST00000638820 TSHBP01222 138 aa9.47□□□□□ -0.89
SCN8A-215ENST00000638820 IGKCP01834 107 aa9.47□□□□□ -0.89
SCN8A-215ENST00000638820 BATFQ16520 125 aa9.47□□□□□ -0.89
SCN8A-215ENST00000638820 LINC01545Q5VT33 79 aa9.47□□□□□ -0.89
SCN8A-215ENST00000638820 C20orf203Q8NBC4 194 aa9.47□□□□□ -0.89
SCN8A-215ENST00000638820 OPRPNQ99935 248 aaPredicted RBP9.47□□□□□ -0.89
SCN8A-215ENST00000638820 PRO0255Q9UI72 69 aa9.47□□□□□ -0.89
SCN8A-215ENST00000638820 RPL32P62910 135 aaKnown RBP9.47□□□□□ -0.89
SCN8A-215ENST00000638820 ZC2HC1BQ5TFG8 222 aa9.47□□□□□ -0.89
SCN8A-215ENST00000638820 CIDEAO60543 219 aa9.46□□□□□ -0.89
SCN8A-215ENST00000638820 DDTP30046 118 aa9.46□□□□□ -0.89
SCN8A-215ENST00000638820 EGFEM1PQ0D2K5 195 aa9.46□□□□□ -0.89
SCN8A-215ENST00000638820 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.89
SCN8A-215ENST00000638820 CEMP1Q6PRD7 247 aaPredicted RBP9.46□□□□□ -0.89
SCN8A-215ENST00000638820 TRBV6-4A0A1B0GX49 114 aa9.46□□□□□ -0.9
SCN8A-215ENST00000638820 IL17DQ8TAD2 202 aa9.46□□□□□ -0.9
SCN8A-215ENST00000638820 PRSS29PA6NIE9 313 aa9.46□□□□□ -0.9
SCN8A-215ENST00000638820 HNRNPA3P51991 378 aaKnown RBP9.46□□□□□ -0.9
SCN8A-215ENST00000638820 DAZ4Q86SG3 579 aaKnown RBP9.46□□□□□ -0.9
SCN8A-215ENST00000638820 DAZ3Q9NR90 486 aaKnown RBP9.46□□□□□ -0.9
SCN8A-215ENST00000638820 FHL2Q14192 279 aa9.45□□□□□ -0.9
SCN8A-215ENST00000638820 UFSP1Q6NVU6 142 aa9.45□□□□□ -0.9
SCN8A-215ENST00000638820 Q8N976 141 aa9.45□□□□□ -0.9
SCN8A-215ENST00000638820 CELA1Q9UNI1 258 aa9.45□□□□□ -0.9
SCN8A-215ENST00000638820 TRBV25-1A0A075B6N4 114 aa9.44□□□□□ -0.9
SCN8A-215ENST00000638820 TRAV26-1A0A087WT03 109 aa9.44□□□□□ -0.9
SCN8A-215ENST00000638820 ODF1Q14990 250 aa9.44□□□□□ -0.9
SCN8A-215ENST00000638820 PMVKQ15126 192 aa9.44□□□□□ -0.9
SCN8A-215ENST00000638820 SAMD5Q5TGI4 173 aa9.44□□□□□ -0.9
SCN8A-215ENST00000638820 BAALCQ8WXS3 180 aa9.44□□□□□ -0.9
SCN8A-215ENST00000638820 TMEM141Q96I45 108 aa9.44□□□□□ -0.9
SCN8A-215ENST00000638820 F8VRH5 84 aa9.44□□□□□ -0.9
SCN8A-215ENST00000638820 TMEM101Q96IK0 257 aa9.44□□□□□ -0.9
SCN8A-215ENST00000638820 TMEM243Q9BU79 118 aa9.44□□□□□ -0.9
SCN8A-215ENST00000638820 A0A087WX48 190 aa9.43□□□□□ -0.9
SCN8A-215ENST00000638820 ATP6V0E2Q8NHE4 81 aa9.43□□□□□ -0.9
SCN8A-215ENST00000638820 UQCR10Q9UDW1 63 aa9.43□□□□□ -0.9
SCN8A-215ENST00000638820 TRAV8-6A0A0B4J262 113 aa9.43□□□□□ -0.9
SCN8A-215ENST00000638820 SMAGPQ0VAQ4 97 aa9.43□□□□□ -0.9
SCN8A-215ENST00000638820 GAGE6Q13070 117 aa9.43□□□□□ -0.9
SCN8A-215ENST00000638820 Q8NAQ8 132 aa9.43□□□□□ -0.9
SCN8A-215ENST00000638820 LINC00587B1AMM8 73 aa9.43□□□□□ -0.9
SCN8A-215ENST00000638820 SLC25A34Q6PIV7 304 aa9.42□□□□□ -0.9
SCN8A-215ENST00000638820 OR5A1Q8NGJ0 315 aa9.42□□□□□ -0.9
SCN8A-215ENST00000638820 C2orf88Q9BSF0 95 aa9.42□□□□□ -0.9
SCN8A-215ENST00000638820 ZMAT4Q9H898 229 aa9.42□□□□□ -0.9
SCN8A-215ENST00000638820 PLNP26678 52 aa9.42□□□□□ -0.9
SCN8A-215ENST00000638820 TIMM17AQ99595 171 aa9.42□□□□□ -0.9
SCN8A-215ENST00000638820 GEMIN7Q9H840 131 aaKnown RBP9.42□□□□□ -0.9
SCN8A-215ENST00000638820 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
SCN8A-215ENST00000638820 UBE2D3P61077 147 aa9.41□□□□□ -0.9
SCN8A-215ENST00000638820 HERVK_113P61574 105 aa9.41□□□□□ -0.9
SCN8A-215ENST00000638820 UBE2D2P62837 147 aa9.41□□□□□ -0.9
SCN8A-215ENST00000638820 SBSPONQ8IVN8 264 aa9.41□□□□□ -0.9
SCN8A-215ENST00000638820 TRAV13-1A0A0B4J241 112 aa9.41□□□□□ -0.9
SCN8A-215ENST00000638820 A0A0J9YWU9 116 aa9.41□□□□□ -0.9
SCN8A-215ENST00000638820 TEX48A0A1B0GUV7 120 aa9.41□□□□□ -0.9
SCN8A-215ENST00000638820 SPATA25Q9BR10 227 aa9.4□□□□□ -0.9
SCN8A-215ENST00000638820 MIEN1Q9BRT3 115 aa9.4□□□□□ -0.9
SCN8A-215ENST00000638820 FGF6P10767 208 aa9.4□□□□□ -0.9
SCN8A-215ENST00000638820 CRYBA4P53673 196 aa9.4□□□□□ -0.9
SCN8A-215ENST00000638820 EDA2RQ9HAV5 297 aa9.4□□□□□ -0.9
SCN8A-215ENST00000638820 CHAC1Q9BUX1 264 aa9.4□□□□□ -0.91
SCN8A-215ENST00000638820 IGHV3-64A0A075B6Q5 118 aa9.39□□□□□ -0.91
SCN8A-215ENST00000638820 IGLC3P0DOY3 106 aa9.39□□□□□ -0.91
SCN8A-215ENST00000638820 ANKRD39Q53RE8 183 aa9.39□□□□□ -0.91
SCN8A-215ENST00000638820 C11orf45Q8TAV5 145 aa9.39□□□□□ -0.91
SCN8A-215ENST00000638820 IGIPA6NJ69 53 aa9.39□□□□□ -0.91
SCN8A-215ENST00000638820 CST9LQ9H4G1 147 aa9.39□□□□□ -0.91
SCN8A-215ENST00000638820 SPANXA1Q9NS26 97 aa9.39□□□□□ -0.91
SCN8A-215ENST00000638820 MRPL23Q16540 153 aaKnown RBP9.38□□□□□ -0.91
SCN8A-215ENST00000638820 K7EIL1 84 aa9.38□□□□□ -0.91
SCN8A-215ENST00000638820 CTAG1AP78358 180 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms