RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 C15orf32Q32M92 178 aa9.01□□□□□ -0.97
GFAP-228ENST00000638488 Q5XG85 94 aa9.01□□□□□ -0.97
GFAP-228ENST00000638488 TRBV7-1A0A0A6YYK4 115 aa9.01□□□□□ -0.97
GFAP-228ENST00000638488 TRAV21A0A0B4J279 112 aa9.01□□□□□ -0.97
GFAP-228ENST00000638488 RPL18AQ02543 176 aaKnown RBP9.01□□□□□ -0.97
GFAP-228ENST00000638488 TRBV27A0A0K0K1C4 114 aa9□□□□□ -0.97
GFAP-228ENST00000638488 SPRY2O43597 315 aa9□□□□□ -0.97
GFAP-228ENST00000638488 PRR9Q5T870 116 aa9□□□□□ -0.97
GFAP-228ENST00000638488 DUX5Q96PT3 197 aa9□□□□□ -0.97
GFAP-228ENST00000638488 KIF25-AS1Q9Y6Z4 181 aa9□□□□□ -0.97
GFAP-228ENST00000638488 IGHV3OR16-13A0A075B7E8 117 aa9□□□□□ -0.97
GFAP-228ENST00000638488 IGHV3-74A0A0B4J1X5 117 aa9□□□□□ -0.97
GFAP-228ENST00000638488 IGHV3-66A0A0C4DH42 116 aa9□□□□□ -0.97
GFAP-228ENST00000638488 LINC00315P59091 139 aa9□□□□□ -0.97
GFAP-228ENST00000638488 ABCA2Q9BZC7 2435 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 TRBV6-5A0A0K0K1A5 114 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 PRSS2P07478 247 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 RHOHQ15669 191 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 LY6EQ16553 131 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 C4orf26Q17RF5 130 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 NSUN5P1Q3KNT7 163 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 SERP2Q8N6R1 65 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 UPK3BQ9BT76 320 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 IGHV4-30-2A0A087WSY4 118 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 OXTP01178 125 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 IGHV3-30-3P0DP02 117 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 CLEC19AQ6UXS0 136 aa8.99□□□□□ -0.97
GFAP-228ENST00000638488 IGHV3-49A0A0A0MS15 119 aa8.98□□□□□ -0.97
GFAP-228ENST00000638488 INAFM2P0DMQ5 153 aa8.98□□□□□ -0.97
GFAP-228ENST00000638488 CYSTM1Q9H1C7 97 aa8.98□□□□□ -0.97
GFAP-228ENST00000638488 HRCT1Q6UXD1 115 aa8.98□□□□□ -0.97
GFAP-228ENST00000638488 FAM110DQ8TAY7 271 aaPredicted RBP8.98□□□□□ -0.97
GFAP-228ENST00000638488 USP9XQ93008 2570 aaPredicted RBP8.98□□□□□ -0.97
GFAP-228ENST00000638488 ZFYVE26Q68DK2 2539 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 IGHV3-64A0A075B6Q5 118 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 IGHV4-38-2P0DP08 117 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 FAM222AQ5U5X8 452 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 C10orf105Q8TEF2 133 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 CELSR2Q9HCU4 2923 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 COX7A2LO14548 114 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 TIMM17BO60830 172 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 ADAMTSL4-AS1Q5T5F5 129 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 SUMO4Q6EEV6 95 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 ZFAND2AQ8N6M9 145 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 C5orf56Q8N8D9 126 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 LINC00477Q96M19 166 aa8.97□□□□□ -0.97
GFAP-228ENST00000638488 MYO18BQ8IUG5 2567 aa8.96□□□□□ -0.97
GFAP-228ENST00000638488 TRAV13-1A0A0B4J241 112 aa8.96□□□□□ -0.98
GFAP-228ENST00000638488 DAZ2Q13117 558 aaKnown RBP8.96□□□□□ -0.98
GFAP-228ENST00000638488 DAZ4Q86SG3 579 aaKnown RBP8.96□□□□□ -0.98
GFAP-228ENST00000638488 DSCR8Q96T75 97 aa8.96□□□□□ -0.98
GFAP-228ENST00000638488 DAZ1Q9NQZ3 744 aaKnown RBP8.96□□□□□ -0.98
GFAP-228ENST00000638488 DAZ3Q9NR90 486 aaKnown RBP8.96□□□□□ -0.98
GFAP-228ENST00000638488 RNASE3P12724 160 aaKnown RBP8.95□□□□□ -0.98
GFAP-228ENST00000638488 FAM19A4Q96LR4 140 aa8.95□□□□□ -0.98
GFAP-228ENST00000638488 A0A0J9YXV3 536 aa8.95□□□□□ -0.98
GFAP-228ENST00000638488 CLPSL1A2RUU4 121 aa8.95□□□□□ -0.98
GFAP-228ENST00000638488 Q6ZSV7 163 aa8.95□□□□□ -0.98
GFAP-228ENST00000638488 CCDC140Q96MF4 163 aa8.95□□□□□ -0.98
GFAP-228ENST00000638488 JPT2Q9H910 190 aa8.95□□□□□ -0.98
GFAP-228ENST00000638488 IGHV1-58A0A0C4DH39 117 aa8.94□□□□□ -0.98
GFAP-228ENST00000638488 NDUFC2-KCTD14E9PQ53 114 aa8.94□□□□□ -0.98
GFAP-228ENST00000638488 RNASE4P34096 147 aaKnown RBP8.94□□□□□ -0.98
GFAP-228ENST00000638488 C9orf139Q6ZV77 190 aa8.94□□□□□ -0.98
GFAP-228ENST00000638488 NDUFA12Q9UI09 145 aa8.94□□□□□ -0.98
GFAP-228ENST00000638488 ZNF580Q9UK33 172 aa8.94□□□□□ -0.98
GFAP-228ENST00000638488 MOB4Q9Y3A3 225 aa8.94□□□□□ -0.98
GFAP-228ENST00000638488 PYGO1Q9Y3Y4 419 aa8.94□□□□□ -0.98
GFAP-228ENST00000638488 DOPEY1Q5JWR5 2465 aa8.94□□□□□ -0.98
GFAP-228ENST00000638488 F8WDY8 70 aa8.94□□□□□ -0.98
GFAP-228ENST00000638488 MALP21145 153 aa8.94□□□□□ -0.98
GFAP-228ENST00000638488 TIRAPP58753 221 aa8.94□□□□□ -0.98
GFAP-228ENST00000638488 H3BUX3 64 aa8.93□□□□□ -0.98
GFAP-228ENST00000638488 APRG1Q8IVJ8 170 aa8.93□□□□□ -0.98
GFAP-228ENST00000638488 MAPK1IP1LQ8NDC0 245 aa8.93□□□□□ -0.98
GFAP-228ENST00000638488 PRO0628Q9UI54 55 aa8.93□□□□□ -0.98
GFAP-228ENST00000638488 IGLV4-3A0A075B6K6 122 aa8.93□□□□□ -0.98
GFAP-228ENST00000638488 BEAN1Q3B7T3 259 aa8.93□□□□□ -0.98
GFAP-228ENST00000638488 C20orf203Q8NBC4 194 aa8.93□□□□□ -0.98
GFAP-228ENST00000638488 OPRPNQ99935 248 aaPredicted RBP8.93□□□□□ -0.98
GFAP-228ENST00000638488 PRRC2AP48634 2157 aaKnown RBP8.93□□□□□ -0.98
GFAP-228ENST00000638488 ADARB2-AS1A8MUL3 147 aa8.92□□□□□ -0.98
GFAP-228ENST00000638488 MRPS36P82909 103 aaKnown RBP8.92□□□□□ -0.98
GFAP-228ENST00000638488 Q6JHZ5 121 aa8.92□□□□□ -0.98
GFAP-228ENST00000638488 IGF1P05019 195 aa8.92□□□□□ -0.98
GFAP-228ENST00000638488 MSMBP08118 114 aa8.92□□□□□ -0.98
GFAP-228ENST00000638488 KLK9Q2XQG4 91 aa8.92□□□□□ -0.98
GFAP-228ENST00000638488 C16orf92Q96LL3 132 aa8.92□□□□□ -0.98
GFAP-228ENST00000638488 BBC3Q96PG8 261 aaPredicted RBP8.92□□□□□ -0.98
GFAP-228ENST00000638488 KLK9Q9UKQ9 250 aa8.92□□□□□ -0.98
GFAP-228ENST00000638488 U3KQE9 123 aa8.92□□□□□ -0.98
GFAP-228ENST00000638488 FAM208BQ5VWN6 2430 aa8.92□□□□□ -0.98
GFAP-228ENST00000638488 BAALC-AS2P0C853 105 aa8.91□□□□□ -0.98
GFAP-228ENST00000638488 USP24Q9UPU5 2620 aa8.91□□□□□ -0.98
GFAP-228ENST00000638488 IGHV3-11P01762 117 aa8.91□□□□□ -0.98
GFAP-228ENST00000638488 ZNF462Q96JM2 2506 aa8.91□□□□□ -0.98
GFAP-228ENST00000638488 MUC4Q99102 2169 aa8.91□□□□□ -0.98
GFAP-228ENST00000638488 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.9□□□□□ -0.98
GFAP-228ENST00000638488 GNRH2O43555 120 aa8.9□□□□□ -0.98
GFAP-228ENST00000638488 AVPP01185 164 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms