RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 IGHV3-33P01772 117 aa10.79□□□□□ -0.68
SCARB2-208ENST00000638372 IGHV3-30-3P0DP02 117 aa10.79□□□□□ -0.68
SCARB2-208ENST00000638372 IGHV3-30-5P0DP03 117 aa10.79□□□□□ -0.68
SCARB2-208ENST00000638372 SPATA12Q7Z6I5 190 aa10.79□□□□□ -0.68
SCARB2-208ENST00000638372 TINCRA0A1B0GVN0 87 aa10.79□□□□□ -0.68
SCARB2-208ENST00000638372 GAGE12HA6NDE8 117 aa10.79□□□□□ -0.68
SCARB2-208ENST00000638372 DEFB114Q30KQ6 69 aa10.78□□□□□ -0.68
SCARB2-208ENST00000638372 Q6ZSV7 163 aa10.78□□□□□ -0.68
SCARB2-208ENST00000638372 TMEM263Q8WUH6 116 aaKnown RBP10.78□□□□□ -0.68
SCARB2-208ENST00000638372 SND1-IT1Q9HBX3 110 aa10.78□□□□□ -0.68
SCARB2-208ENST00000638372 C1orf43Q9BWL3 253 aa10.78□□□□□ -0.68
SCARB2-208ENST00000638372 HIGD1BQ9P298 99 aa10.78□□□□□ -0.68
SCARB2-208ENST00000638372 PRSS47A8MTI9 375 aa10.77□□□□□ -0.68
SCARB2-208ENST00000638372 AVPP01185 164 aa10.77□□□□□ -0.69
SCARB2-208ENST00000638372 HERV-K104P63124 156 aa10.77□□□□□ -0.69
SCARB2-208ENST00000638372 VSIG2Q96IQ7 327 aa10.77□□□□□ -0.69
SCARB2-208ENST00000638372 ANKRD17O75179 2603 aaKnown RBP10.77□□□□□ -0.69
SCARB2-208ENST00000638372 WFDC2Q14508 124 aa10.77□□□□□ -0.69
SCARB2-208ENST00000638372 LRRC75A-AS1Q8N1F1 130 aa10.77□□□□□ -0.69
SCARB2-208ENST00000638372 HAMPP81172 84 aa10.76□□□□□ -0.69
SCARB2-208ENST00000638372 Q6ZUT4 128 aa10.76□□□□□ -0.69
SCARB2-208ENST00000638372 COX7A2LO14548 114 aa10.76□□□□□ -0.69
SCARB2-208ENST00000638372 RS1O15537 224 aa10.76□□□□□ -0.69
SCARB2-208ENST00000638372 IFITM1P13164 125 aa10.76□□□□□ -0.69
SCARB2-208ENST00000638372 ZMAT4Q9H898 229 aa10.76□□□□□ -0.69
SCARB2-208ENST00000638372 ICOSQ9Y6W8 199 aa10.76□□□□□ -0.69
SCARB2-208ENST00000638372 C11orf21Q9P2W6 132 aa10.75□□□□□ -0.69
SCARB2-208ENST00000638372 LGALS9O00182 355 aa10.75□□□□□ -0.69
SCARB2-208ENST00000638372 PSMB8P28062 276 aa10.75□□□□□ -0.69
SCARB2-208ENST00000638372 LAMA2P24043 3122 aaKnown RBP10.74□□□□□ -0.69
SCARB2-208ENST00000638372 BAALC-AS2P0C853 105 aa10.74□□□□□ -0.69
SCARB2-208ENST00000638372 COX7B2Q8TF08 81 aa10.74□□□□□ -0.69
SCARB2-208ENST00000638372 PRR9Q5T870 116 aa10.74□□□□□ -0.69
SCARB2-208ENST00000638372 KLK12Q9UKR0 248 aa10.74□□□□□ -0.69
SCARB2-208ENST00000638372 IGHV4-4A0A075B6R2 117 aa10.73□□□□□ -0.69
SCARB2-208ENST00000638372 CAMK2N2Q96S95 79 aa10.73□□□□□ -0.69
SCARB2-208ENST00000638372 TMEM126AQ9H061 195 aa10.73□□□□□ -0.69
SCARB2-208ENST00000638372 INAFM1C9JVW0 142 aa10.73□□□□□ -0.69
SCARB2-208ENST00000638372 RNF185Q96GF1 192 aa10.73□□□□□ -0.69
SCARB2-208ENST00000638372 C18orf65Q6ZTR6 163 aa10.73□□□□□ -0.69
SCARB2-208ENST00000638372 RNASE8Q8TDE3 154 aaKnown RBP10.73□□□□□ -0.69
SCARB2-208ENST00000638372 PRO0255Q9UI72 69 aa10.73□□□□□ -0.69
SCARB2-208ENST00000638372 TRBV10-1A0A0K0K1A3 114 aa10.72□□□□□ -0.69
SCARB2-208ENST00000638372 PRM2P04554 102 aa10.72□□□□□ -0.69
SCARB2-208ENST00000638372 CPAMD8Q8IZJ3 1885 aa10.72□□□□□ -0.69
SCARB2-208ENST00000638372 IGHV1-58A0A0C4DH39 117 aa10.72□□□□□ -0.69
SCARB2-208ENST00000638372 PROK1P58294 105 aa10.72□□□□□ -0.69
SCARB2-208ENST00000638372 UBL5Q9BZL1 73 aa10.72□□□□□ -0.69
SCARB2-208ENST00000638372 GAS8-AS1O95177 125 aa10.72□□□□□ -0.69
SCARB2-208ENST00000638372 EXPH5Q8NEV8 1989 aa10.72□□□□□ -0.69
SCARB2-208ENST00000638372 ANKRD29Q8N6D5 301 aa10.72□□□□□ -0.69
SCARB2-208ENST00000638372 RMI2Q96E14 147 aa10.72□□□□□ -0.69
SCARB2-208ENST00000638372 ODF3Q96PU9 254 aa10.72□□□□□ -0.69
SCARB2-208ENST00000638372 IGKV2D-26A0A0A0MRZ7 120 aa10.71□□□□□ -0.69
SCARB2-208ENST00000638372 TNRC6BQ9UPQ9 1833 aaKnown RBP10.7□□□□□ -0.7
SCARB2-208ENST00000638372 MIR7-3HGQ8N6C7 128 aa10.7□□□□□ -0.7
SCARB2-208ENST00000638372 ZNF702PQ9H963 129 aa10.7□□□□□ -0.7
SCARB2-208ENST00000638372 KRTAP10-9P60411 292 aa10.7□□□□□ -0.7
SCARB2-208ENST00000638372 C15orf53Q8NAA6 179 aa10.7□□□□□ -0.7
SCARB2-208ENST00000638372 RNASE3P12724 160 aaKnown RBP10.69□□□□□ -0.7
SCARB2-208ENST00000638372 INSL3P51460 131 aa10.69□□□□□ -0.7
SCARB2-208ENST00000638372 LINC01620Q4KN68 170 aa10.69□□□□□ -0.7
SCARB2-208ENST00000638372 LINC00467Q9BRT7 94 aa10.69□□□□□ -0.7
SCARB2-208ENST00000638372 CENPEQ02224 2701 aa10.69□□□□□ -0.7
SCARB2-208ENST00000638372 CDKN2A-AS1Q9UH64 79 aa10.69□□□□□ -0.7
SCARB2-208ENST00000638372 DSCR8Q96T75 97 aa10.69□□□□□ -0.7
SCARB2-208ENST00000638372 M0QY20 66 aa10.69□□□□□ -0.7
SCARB2-208ENST00000638372 FAM222AQ5U5X8 452 aa10.69□□□□□ -0.7
SCARB2-208ENST00000638372 LINC00482Q8N8I6 264 aa10.69□□□□□ -0.7
SCARB2-208ENST00000638372 NEXN-AS1Q8NBZ9 246 aa10.68□□□□□ -0.7
SCARB2-208ENST00000638372 CHD9Q3L8U1 2897 aa10.68□□□□□ -0.7
SCARB2-208ENST00000638372 CRYBA4P53673 196 aa10.68□□□□□ -0.7
SCARB2-208ENST00000638372 PSMG3-AS1Q96PY0 264 aa10.68□□□□□ -0.7
SCARB2-208ENST00000638372 CCL18P55774 89 aa10.68□□□□□ -0.7
SCARB2-208ENST00000638372 PTH2Q96A98 100 aa10.68□□□□□ -0.7
SCARB2-208ENST00000638372 DEFB105AQ8NG35 78 aa10.68□□□□□ -0.7
SCARB2-208ENST00000638372 WFDC10AQ9H1F0 79 aa10.67□□□□□ -0.7
SCARB2-208ENST00000638372 IGLV1-40P01703 118 aa10.67□□□□□ -0.7
SCARB2-208ENST00000638372 TRAV26-1A0A087WT03 109 aa10.67□□□□□ -0.7
SCARB2-208ENST00000638372 EDN2P20800 178 aa10.67□□□□□ -0.7
SCARB2-208ENST00000638372 LINC01006Q8NI28 216 aa10.67□□□□□ -0.7
SCARB2-208ENST00000638372 CLEC2BQ92478 149 aa10.67□□□□□ -0.7
SCARB2-208ENST00000638372 PRUNE2Q8WUY3 3088 aa10.67□□□□□ -0.7
SCARB2-208ENST00000638372 RPL18AQ02543 176 aaKnown RBP10.67□□□□□ -0.7
SCARB2-208ENST00000638372 SPAG11BQ08648 103 aa10.67□□□□□ -0.7
SCARB2-208ENST00000638372 TEN1Q86WV5 123 aa10.66□□□□□ -0.7
SCARB2-208ENST00000638372 MAPKAPK5-AS1Q8N8E1 139 aa10.66□□□□□ -0.7
SCARB2-208ENST00000638372 ORMDL1Q9P0S3 153 aa10.66□□□□□ -0.7
SCARB2-208ENST00000638372 COL5A1P20908 1838 aaPredicted RBP10.66□□□□□ -0.7
SCARB2-208ENST00000638372 IGLV4-3A0A075B6K6 122 aa10.66□□□□□ -0.7
SCARB2-208ENST00000638372 RPL32P62910 135 aaKnown RBP10.65□□□□□ -0.7
SCARB2-208ENST00000638372 RAI1Q7Z5J4 1906 aaPredicted RBP10.65□□□□□ -0.7
SCARB2-208ENST00000638372 U3KQK5 164 aa10.65□□□□□ -0.7
SCARB2-208ENST00000638372 LINC00310P59036 64 aa10.65□□□□□ -0.7
SCARB2-208ENST00000638372 UBE2BP63146 152 aa10.65□□□□□ -0.7
SCARB2-208ENST00000638372 CFAP126Q5VTH2 177 aa10.65□□□□□ -0.7
SCARB2-208ENST00000638372 NDUFA11Q86Y39 141 aa10.65□□□□□ -0.71
SCARB2-208ENST00000638372 DCANP1Q8TF63 244 aa10.65□□□□□ -0.71
SCARB2-208ENST00000638372 A0A0J9YXY3 114 aa10.64□□□□□ -0.71
SCARB2-208ENST00000638372 F8W735 103 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms