RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 TRBV7-3A0A075B6L6 115 aa13.71□□□□□ -0.22
CLN5-216ENST00000636780 TRBV6-5A0A0K0K1A5 114 aa13.71□□□□□ -0.22
CLN5-216ENST00000636780 LINC01006Q8NI28 216 aa13.71□□□□□ -0.22
CLN5-216ENST00000636780 A8MZ25 164 aa13.7□□□□□ -0.22
CLN5-216ENST00000636780 I3L3M4 83 aa13.7□□□□□ -0.22
CLN5-216ENST00000636780 K7EP34 96 aa13.7□□□□□ -0.22
CLN5-216ENST00000636780 NSUN5P1Q3KNT7 163 aa13.7□□□□□ -0.22
CLN5-216ENST00000636780 CFAP126Q5VTH2 177 aa13.7□□□□□ -0.22
CLN5-216ENST00000636780 C20orf203Q8NBC4 194 aa13.7□□□□□ -0.22
CLN5-216ENST00000636780 KMT2BQ9UMN6 2715 aaPredicted RBP13.7□□□□□ -0.22
CLN5-216ENST00000636780 FAM104AQ969W3 186 aa13.69□□□□□ -0.22
CLN5-216ENST00000636780 SRSF9Q13242 221 aaKnown RBP eCLIP13.69□□□□□ -0.22
CLN5-216ENST00000636780 C11orf72Q8NBR9 251 aa13.69□□□□□ -0.22
CLN5-216ENST00000636780 M0R2P5 195 aa13.68□□□□□ -0.22
CLN5-216ENST00000636780 C1orf158Q8N1D5 194 aa13.68□□□□□ -0.22
CLN5-216ENST00000636780 TRRAPQ9Y4A5 3859 aa13.68□□□□□ -0.22
CLN5-216ENST00000636780 IGLV4-3A0A075B6K6 122 aa13.67□□□□□ -0.22
CLN5-216ENST00000636780 STHQ8IWL8 128 aa13.67□□□□□ -0.22
CLN5-216ENST00000636780 SPXQ9BT56 116 aa13.67□□□□□ -0.22
CLN5-216ENST00000636780 TNFRSF18Q9Y5U5 241 aa13.67□□□□□ -0.22
CLN5-216ENST00000636780 IGLL5B9A064 214 aa13.67□□□□□ -0.22
CLN5-216ENST00000636780 APOMO95445 188 aa13.67□□□□□ -0.22
CLN5-216ENST00000636780 FABP2P12104 132 aa13.67□□□□□ -0.22
CLN5-216ENST00000636780 RPL35AP18077 110 aaKnown RBP13.67□□□□□ -0.22
CLN5-216ENST00000636780 A6NJY4 79 aa13.67□□□□□ -0.22
CLN5-216ENST00000636780 TIMM17AQ99595 171 aa13.67□□□□□ -0.22
CLN5-216ENST00000636780 RPL32P62910 135 aaKnown RBP13.66□□□□□ -0.22
CLN5-216ENST00000636780 TRAV8-3A0A0A6YYJ7 113 aa13.66□□□□□ -0.22
CLN5-216ENST00000636780 TRGV1A0A0A0MS02 117 aa13.65□□□□□ -0.22
CLN5-216ENST00000636780 H3BMG7 143 aa13.65□□□□□ -0.22
CLN5-216ENST00000636780 GTF2H5Q6ZYL4 71 aa13.65□□□□□ -0.22
CLN5-216ENST00000636780 TMEM141Q96I45 108 aa13.65□□□□□ -0.22
CLN5-216ENST00000636780 G3V4G9 280 aa13.65□□□□□ -0.22
CLN5-216ENST00000636780 ZNF479Q96JC4 524 aa13.65□□□□□ -0.22
CLN5-216ENST00000636780 VCX2Q9H322 139 aa13.65□□□□□ -0.22
CLN5-216ENST00000636780 ZNF415Q09FC8 603 aa13.64□□□□□ -0.23
CLN5-216ENST00000636780 Q6ZTI0 123 aa13.64□□□□□ -0.23
CLN5-216ENST00000636780 NDUFA7O95182 113 aa13.63□□□□□ -0.23
CLN5-216ENST00000636780 INSP01308 110 aa13.63□□□□□ -0.23
CLN5-216ENST00000636780 LINC00467Q9BRT7 94 aa13.63□□□□□ -0.23
CLN5-216ENST00000636780 A0A0J9YY99 117 aa13.63□□□□□ -0.23
CLN5-216ENST00000636780 A8MTW9 85 aa13.62□□□□□ -0.23
CLN5-216ENST00000636780 TRAV2A0A0B4J234 112 aa13.62□□□□□ -0.23
CLN5-216ENST00000636780 LINC01549A6NIU2 74 aa13.62□□□□□ -0.23
CLN5-216ENST00000636780 J3QQQ9 107 aa13.62□□□□□ -0.23
CLN5-216ENST00000636780 ZNF22P17026 224 aaPredicted RBP13.62□□□□□ -0.23
CLN5-216ENST00000636780 AMELXQ99217 191 aa13.61□□□□□ -0.23
CLN5-216ENST00000636780 FHL3Q13643 280 aa13.61□□□□□ -0.23
CLN5-216ENST00000636780 SPATA3Q8NHX4 192 aa13.61□□□□□ -0.23
CLN5-216ENST00000636780 PGPEP1Q9NXJ5 209 aa13.61□□□□□ -0.23
CLN5-216ENST00000636780 WFDC2Q14508 124 aa13.6□□□□□ -0.23
CLN5-216ENST00000636780 CHCHD7Q9BUK0 85 aa13.6□□□□□ -0.23
CLN5-216ENST00000636780 A8MWV9 139 aa13.6□□□□□ -0.23
CLN5-216ENST00000636780 J3QKU1 62 aa13.6□□□□□ -0.23
CLN5-216ENST00000636780 RHOHQ15669 191 aa13.6□□□□□ -0.23
CLN5-216ENST00000636780 NOP10Q9NPE3 64 aaKnown RBP13.6□□□□□ -0.23
CLN5-216ENST00000636780 Q6ZUT4 128 aa13.59□□□□□ -0.23
CLN5-216ENST00000636780 ATRQ13535 2644 aa13.59□□□□□ -0.23
CLN5-216ENST00000636780 GIG44P09565 113 aaPredicted RBP13.59□□□□□ -0.23
CLN5-216ENST00000636780 HERVK_113P61574 105 aa13.59□□□□□ -0.23
CLN5-216ENST00000636780 NPC2P61916 151 aa13.59□□□□□ -0.23
CLN5-216ENST00000636780 RPL24P83731 157 aaKnown RBP13.59□□□□□ -0.23
CLN5-216ENST00000636780 RHODO00212 210 aa13.58□□□□□ -0.23
CLN5-216ENST00000636780 TMEM86BQ8N661 226 aa13.58□□□□□ -0.23
CLN5-216ENST00000636780 TMEM223A0PJW6 202 aa13.58□□□□□ -0.24
CLN5-216ENST00000636780 LGALS3P17931 250 aaKnown RBP13.58□□□□□ -0.24
CLN5-216ENST00000636780 KRTAP10-3P60369 221 aa13.57□□□□□ -0.24
CLN5-216ENST00000636780 SH2D6Q7Z4S9 175 aa13.57□□□□□ -0.24
CLN5-216ENST00000636780 H7C2G1 150 aa13.57□□□□□ -0.24
CLN5-216ENST00000636780 LINC00694P0DN24 101 aa13.57□□□□□ -0.24
CLN5-216ENST00000636780 TSSC4Q9Y5U2 329 aaPredicted RBP13.57□□□□□ -0.24
CLN5-216ENST00000636780 LOC100131303A0A0U1RQF7 123 aa13.57□□□□□ -0.24
CLN5-216ENST00000636780 SPINK8P0C7L1 97 aa13.57□□□□□ -0.24
CLN5-216ENST00000636780 LOC107984156A0A0G2JMH3 177 aa13.56□□□□□ -0.24
CLN5-216ENST00000636780 RRN3P1Q2M238 152 aa13.56□□□□□ -0.24
CLN5-216ENST00000636780 ARL17AQ8IVW1 177 aa13.56□□□□□ -0.24
CLN5-216ENST00000636780 HIVEP1P15822 2718 aa13.56□□□□□ -0.24
CLN5-216ENST00000636780 TAL2Q16559 108 aa13.56□□□□□ -0.24
CLN5-216ENST00000636780 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.56□□□□□ -0.24
CLN5-216ENST00000636780 SMAGPQ0VAQ4 97 aa13.55□□□□□ -0.24
CLN5-216ENST00000636780 NFE4Q86UQ8 179 aa13.55□□□□□ -0.24
CLN5-216ENST00000636780 C10orf126Q8N4M7 172 aa13.55□□□□□ -0.24
CLN5-216ENST00000636780 GTSF1LQ9H1H1 148 aa13.55□□□□□ -0.24
CLN5-216ENST00000636780 UBE2D4Q9Y2X8 147 aa13.55□□□□□ -0.24
CLN5-216ENST00000636780 A0A1B0GV72 72 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 GAGE12JA6NER3 117 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 EIF4EBP3O60516 100 aaPredicted RBP13.54□□□□□ -0.24
CLN5-216ENST00000636780 GAGE7O76087 117 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 GAGE12FP0CL80 117 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 GAGE12GP0CL81 117 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 GAGE12IP0CL82 117 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 GAGE4Q13068 117 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 GAGE5Q13069 117 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 GAGE13Q4V321 117 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 TRAV26-1A0A087WT03 109 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 TEX48A0A1B0GUV7 120 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 IGHV3-30P01768 117 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 IGHV3-30-5P0DP03 117 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 PAPPA-AS1Q5QFB9 102 aa13.54□□□□□ -0.24
CLN5-216ENST00000636780 IGHV3-30-3P0DP02 117 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms