RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 HIST1H2BMQ99879 126 aa12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 TRBV25-1A0A075B6N4 114 aa12.17□□□□□ -0.46
SPTAN1-217ENST00000629089 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
SPTAN1-217ENST00000629089 AMTP48728 403 aa12.17□□□□□ -0.46
SPTAN1-217ENST00000629089 Q0VG73 95 aa12.17□□□□□ -0.46
SPTAN1-217ENST00000629089 CSMD3Q7Z407 3707 aa12.17□□□□□ -0.46
SPTAN1-217ENST00000629089 IGHV1-24A0A0C4DH33 117 aa12.16□□□□□ -0.46
SPTAN1-217ENST00000629089 TIRAPP58753 221 aa12.16□□□□□ -0.46
SPTAN1-217ENST00000629089 RAB5BP61020 215 aa12.16□□□□□ -0.46
SPTAN1-217ENST00000629089 LELP1Q5T871 98 aa12.16□□□□□ -0.46
SPTAN1-217ENST00000629089 NIT1Q86X76 327 aa12.16□□□□□ -0.46
SPTAN1-217ENST00000629089 LINC00614P0C842 121 aa12.16□□□□□ -0.46
SPTAN1-217ENST00000629089 RNASEKQ6P5S7 137 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-217ENST00000629089 UBE2DNLQ8IWF7 75 aa12.16□□□□□ -0.46
SPTAN1-217ENST00000629089 K7EMI3 77 aa12.15□□□□□ -0.46
SPTAN1-217ENST00000629089 LAGE3Q14657 143 aa12.15□□□□□ -0.46
SPTAN1-217ENST00000629089 ORMDL2Q53FV1 153 aa12.15□□□□□ -0.46
SPTAN1-217ENST00000629089 AP5S1Q9NUS5 200 aa12.15□□□□□ -0.46
SPTAN1-217ENST00000629089 LINC00588Q9Y4M8 146 aa12.15□□□□□ -0.46
SPTAN1-217ENST00000629089 TRAV8-6A0A0B4J262 113 aa12.14□□□□□ -0.47
SPTAN1-217ENST00000629089 CHCHD5Q9BSY4 110 aa12.14□□□□□ -0.47
SPTAN1-217ENST00000629089 TMEM243Q9BU79 118 aa12.14□□□□□ -0.47
SPTAN1-217ENST00000629089 UBE2L6O14933 153 aa12.13□□□□□ -0.47
SPTAN1-217ENST00000629089 URB1-AS1Q96HZ7 61 aa12.13□□□□□ -0.47
SPTAN1-217ENST00000629089 CHCHD7Q9BUK0 85 aa12.13□□□□□ -0.47
SPTAN1-217ENST00000629089 CHCHD1Q96BP2 118 aaKnown RBP12.12□□□□□ -0.47
SPTAN1-217ENST00000629089 MRPS16Q9Y3D3 137 aaKnown RBP12.12□□□□□ -0.47
SPTAN1-217ENST00000629089 STARD9Q9P2P6 4700 aa12.12□□□□□ -0.47
SPTAN1-217ENST00000629089 DYNC2H1Q8NCM8 4307 aaKnown RBP12.12□□□□□ -0.47
SPTAN1-217ENST00000629089 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.11□□□□□ -0.47
SPTAN1-217ENST00000629089 IGKV2-29A2NJV5 120 aaPredicted RBP12.11□□□□□ -0.47
SPTAN1-217ENST00000629089 LINC01546A6NGU7 62 aa12.11□□□□□ -0.47
SPTAN1-217ENST00000629089 ESDP10768 282 aa12.11□□□□□ -0.47
SPTAN1-217ENST00000629089 SERF1AO75920 110 aa12.11□□□□□ -0.47
SPTAN1-217ENST00000629089 BTF3P20290 206 aaKnown RBP12.11□□□□□ -0.47
SPTAN1-217ENST00000629089 NDUFA6P56556 154 aa12.11□□□□□ -0.47
SPTAN1-217ENST00000629089 GAGE6Q13070 117 aa12.11□□□□□ -0.47
SPTAN1-217ENST00000629089 TMEM18Q96B42 140 aa12.11□□□□□ -0.47
SPTAN1-217ENST00000629089 TMEM262E9PQX1 116 aa12.1□□□□□ -0.47
SPTAN1-217ENST00000629089 HSBP1O75506 76 aa12.1□□□□□ -0.47
SPTAN1-217ENST00000629089 WFDC10BQ8IUB3 73 aa12.1□□□□□ -0.47
SPTAN1-217ENST00000629089 C20orf203Q8NBC4 194 aa12.1□□□□□ -0.47
SPTAN1-217ENST00000629089 G0S2P27469 103 aa12.09□□□□□ -0.47
SPTAN1-217ENST00000629089 UPK3BQ9BT76 320 aa12.09□□□□□ -0.47
SPTAN1-217ENST00000629089 H7C423 109 aa12.08□□□□□ -0.48
SPTAN1-217ENST00000629089 RPL39P62891 51 aaKnown RBP12.08□□□□□ -0.48
SPTAN1-217ENST00000629089 PMCHL1Q16048 86 aa12.08□□□□□ -0.48
SPTAN1-217ENST00000629089 CYSLTR1Q9Y271 337 aa12.08□□□□□ -0.48
SPTAN1-217ENST00000629089 LINC00310P59036 64 aa12.07□□□□□ -0.48
SPTAN1-217ENST00000629089 PKIAP61925 76 aa12.07□□□□□ -0.48
SPTAN1-217ENST00000629089 AMMECR1LQ6DCA0 310 aa12.07□□□□□ -0.48
SPTAN1-217ENST00000629089 C2orf66Q6UXQ4 117 aa12.07□□□□□ -0.48
SPTAN1-217ENST00000629089 A0A087WX48 190 aa12.06□□□□□ -0.48
SPTAN1-217ENST00000629089 SIVA1O15304 175 aa12.06□□□□□ -0.48
SPTAN1-217ENST00000629089 S100A6P06703 90 aa12.06□□□□□ -0.48
SPTAN1-217ENST00000629089 LGALS9CQ6DKI2 356 aa12.06□□□□□ -0.48
SPTAN1-217ENST00000629089 NUPR1O60356 82 aa12.06□□□□□ -0.48
SPTAN1-217ENST00000629089 HBDP02042 147 aa12.06□□□□□ -0.48
SPTAN1-217ENST00000629089 FGF6P10767 208 aa12.06□□□□□ -0.48
SPTAN1-217ENST00000629089 SMAGPQ0VAQ4 97 aa12.06□□□□□ -0.48
SPTAN1-217ENST00000629089 Q9H8V8 135 aa12.06□□□□□ -0.48
SPTAN1-217ENST00000629089 PLECQ15149 4684 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-217ENST00000629089 LY6G6CO95867 125 aa12.05□□□□□ -0.48
SPTAN1-217ENST00000629089 MPV17L2Q567V2 206 aa12.05□□□□□ -0.48
SPTAN1-217ENST00000629089 COA6Q5JTJ3 125 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-217ENST00000629089 FAM19A2Q8N3H0 131 aa12.05□□□□□ -0.48
SPTAN1-217ENST00000629089 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
SPTAN1-217ENST00000629089 IGHV3-30P01768 117 aa12.04□□□□□ -0.48
SPTAN1-217ENST00000629089 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
SPTAN1-217ENST00000629089 IGHV3-30-3P0DP02 117 aa12.04□□□□□ -0.48
SPTAN1-217ENST00000629089 IGHV3-30-5P0DP03 117 aa12.04□□□□□ -0.48
SPTAN1-217ENST00000629089 DGAT2L7PQ6IED9 249 aa12.04□□□□□ -0.48
SPTAN1-217ENST00000629089 TMEM101Q96IK0 257 aa12.04□□□□□ -0.48
SPTAN1-217ENST00000629089 TMA7Q9Y2S6 64 aaKnown RBP12.04□□□□□ -0.48
SPTAN1-217ENST00000629089 UBE2D4Q9Y2X8 147 aa12.04□□□□□ -0.48
SPTAN1-217ENST00000629089 TENM2Q9NT68 2774 aa12.04□□□□□ -0.48
SPTAN1-217ENST00000629089 A0A096LNJ9 63 aa12.03□□□□□ -0.48
SPTAN1-217ENST00000629089 LINC01549A6NIU2 74 aa12.03□□□□□ -0.48
SPTAN1-217ENST00000629089 ZNF25P17030 456 aaPredicted RBP12.03□□□□□ -0.48
SPTAN1-217ENST00000629089 RBX1P62877 108 aa12.03□□□□□ -0.48
SPTAN1-217ENST00000629089 Q8N3U1 123 aa12.03□□□□□ -0.48
SPTAN1-217ENST00000629089 Q8N976 141 aa12.03□□□□□ -0.48
SPTAN1-217ENST00000629089 DNAH10OSP0CZ25 163 aa12.02□□□□□ -0.48
SPTAN1-217ENST00000629089 LINC01556Q5JQF7 62 aa12.02□□□□□ -0.48
SPTAN1-217ENST00000629089 MRPL52Q86TS9 123 aaKnown RBP12.02□□□□□ -0.48
SPTAN1-217ENST00000629089 LINC00476Q8WZB0 136 aa12.02□□□□□ -0.48
SPTAN1-217ENST00000629089 A0A1B0GUV1 79 aa12.01□□□□□ -0.49
SPTAN1-217ENST00000629089 OR5A1Q8NGJ0 315 aa12.01□□□□□ -0.49
SPTAN1-217ENST00000629089 SCGB3A1Q96QR1 104 aa12.01□□□□□ -0.49
SPTAN1-217ENST00000629089 TIMM21Q9BVV7 248 aa12.01□□□□□ -0.49
SPTAN1-217ENST00000629089 SPANXA1Q9NS26 97 aa12.01□□□□□ -0.49
SPTAN1-217ENST00000629089 IGLV4-60A0A075B6I1 120 aa12.01□□□□□ -0.49
SPTAN1-217ENST00000629089 ANGP03950 147 aaKnown RBP12.01□□□□□ -0.49
SPTAN1-217ENST00000629089 PDZD11Q5EBL8 140 aa12.01□□□□□ -0.49
SPTAN1-217ENST00000629089 CSDC2Q9Y534 153 aaKnown RBP12.01□□□□□ -0.49
SPTAN1-217ENST00000629089 PYGO1Q9Y3Y4 419 aa12□□□□□ -0.49
SPTAN1-217ENST00000629089 ERASQ7Z444 233 aa11.99□□□□□ -0.49
SPTAN1-217ENST00000629089 TIMM17AQ99595 171 aa11.99□□□□□ -0.49
SPTAN1-217ENST00000629089 LYSTQ99698 3801 aa11.98□□□□□ -0.49
SPTAN1-217ENST00000629089 TRAV9-2A0A087WT02 112 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms