RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CLUHP3Q96NS8 147 aa6.66□□□□□ -1.34
HDAC9-229ENST00000622668 TRBV24-1A0A075B6N3 115 aa6.66□□□□□ -1.34
HDAC9-229ENST00000622668 ORAOV1Q8WV07 137 aa6.66□□□□□ -1.34
HDAC9-229ENST00000622668 C20orf78Q9BR46 151 aa6.66□□□□□ -1.34
HDAC9-229ENST00000622668 COX11Q9Y6N1 276 aa6.66□□□□□ -1.34
HDAC9-229ENST00000622668 SLC25A34Q6PIV7 304 aa6.65□□□□□ -1.34
HDAC9-229ENST00000622668 TMEM141Q96I45 108 aa6.65□□□□□ -1.34
HDAC9-229ENST00000622668 PMVKQ15126 192 aa6.65□□□□□ -1.34
HDAC9-229ENST00000622668 SPATA45Q537H7 98 aa6.65□□□□□ -1.35
HDAC9-229ENST00000622668 LINC00269Q8N2A0 174 aa6.65□□□□□ -1.35
HDAC9-229ENST00000622668 WFDC9Q8NEX5 89 aa6.65□□□□□ -1.35
HDAC9-229ENST00000622668 PLEKHB2Q96CS7 222 aa6.65□□□□□ -1.35
HDAC9-229ENST00000622668 MYMXA0A1B0GTQ4 84 aa6.64□□□□□ -1.35
HDAC9-229ENST00000622668 C14orf177Q52M58 125 aa6.64□□□□□ -1.35
HDAC9-229ENST00000622668 CYSRT1A8MQ03 144 aa6.64□□□□□ -1.35
HDAC9-229ENST00000622668 HIGD2BQ4VC39 106 aa6.64□□□□□ -1.35
HDAC9-229ENST00000622668 MUC7Q8TAX7 377 aa6.64□□□□□ -1.35
HDAC9-229ENST00000622668 PKIGQ9Y2B9 76 aa6.64□□□□□ -1.35
HDAC9-229ENST00000622668 ZC2HC1BQ5TFG8 222 aa6.64□□□□□ -1.35
HDAC9-229ENST00000622668 Q8N976 141 aa6.64□□□□□ -1.35
HDAC9-229ENST00000622668 DKK2Q9UBU2 259 aa6.64□□□□□ -1.35
HDAC9-229ENST00000622668 ZNF25P17030 456 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-229ENST00000622668 C11orf1Q9H5F2 150 aa6.64□□□□□ -1.35
HDAC9-229ENST00000622668 Q0VG73 95 aa6.63□□□□□ -1.35
HDAC9-229ENST00000622668 C12orf57Q99622 126 aa6.63□□□□□ -1.35
HDAC9-229ENST00000622668 LRCOL1A6NCL2 159 aa6.63□□□□□ -1.35
HDAC9-229ENST00000622668 CCL25O15444 150 aa6.63□□□□□ -1.35
HDAC9-229ENST00000622668 HERVK_113P63121 156 aa6.63□□□□□ -1.35
HDAC9-229ENST00000622668 NFE4Q86UQ8 179 aa6.63□□□□□ -1.35
HDAC9-229ENST00000622668 IGHV4-4A0A075B6R2 117 aa6.63□□□□□ -1.35
HDAC9-229ENST00000622668 TIRAPP58753 221 aa6.63□□□□□ -1.35
HDAC9-229ENST00000622668 SPTBN5Q9NRC6 3674 aaKnown RBP6.62□□□□□ -1.35
HDAC9-229ENST00000622668 TENM4Q6N022 2769 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 LOC100131303A0A0U1RQF7 123 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 GTSF1Q8WW33 167 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 C14orf144Q96I85 54 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 B9D2Q9BPU9 175 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 TRBV6-1A0A0K0K1D8 114 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 SMIM27A0A1W2PRY6 76 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 MED14OSP0DP75 135 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 SPAG11BQ08648 103 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 ERASQ7Z444 233 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 C1orf158Q8N1D5 194 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 TRBV6-4A0A1B0GX49 114 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 GAGE12HA6NDE8 117 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 REG3AQ06141 175 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 CFAP126Q5VTH2 177 aa6.62□□□□□ -1.35
HDAC9-229ENST00000622668 SPINK8P0C7L1 97 aa6.61□□□□□ -1.35
HDAC9-229ENST00000622668 MRGPRG-AS1Q2M3A8 158 aa6.61□□□□□ -1.35
HDAC9-229ENST00000622668 BEAN1Q3B7T3 259 aa6.61□□□□□ -1.35
HDAC9-229ENST00000622668 SPANXA1Q9NS26 97 aa6.61□□□□□ -1.35
HDAC9-229ENST00000622668 PRR9Q5T870 116 aa6.61□□□□□ -1.35
HDAC9-229ENST00000622668 SFTA2Q6UW10 78 aa6.61□□□□□ -1.35
HDAC9-229ENST00000622668 COL27A1Q8IZC6 1860 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-229ENST00000622668 K7EIL1 84 aa6.61□□□□□ -1.35
HDAC9-229ENST00000622668 NDUFA1O15239 70 aa6.6□□□□□ -1.35
HDAC9-229ENST00000622668 RPL39P62891 51 aaKnown RBP6.6□□□□□ -1.35
HDAC9-229ENST00000622668 PET117Q6UWS5 81 aa6.6□□□□□ -1.35
HDAC9-229ENST00000622668 KLLNB2CW77 178 aa6.6□□□□□ -1.35
HDAC9-229ENST00000622668 TMEM238C9JI98 176 aa6.6□□□□□ -1.35
HDAC9-229ENST00000622668 ZFP2Q6ZN57 461 aa6.6□□□□□ -1.35
HDAC9-229ENST00000622668 GATD1Q8NB37 220 aa6.6□□□□□ -1.35
HDAC9-229ENST00000622668 C18orf32Q8TCD1 76 aa6.6□□□□□ -1.35
HDAC9-229ENST00000622668 ADGRG4Q8IZF6 3080 aa6.59□□□□□ -1.35
HDAC9-229ENST00000622668 CEMP1Q6PRD7 247 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-229ENST00000622668 HIST1H2BKO60814 126 aa6.59□□□□□ -1.35
HDAC9-229ENST00000622668 HIST1H2BJP06899 126 aa6.59□□□□□ -1.35
HDAC9-229ENST00000622668 HIST1H2BOP23527 126 aa6.59□□□□□ -1.35
HDAC9-229ENST00000622668 HIST1H2BBP33778 126 aa6.59□□□□□ -1.35
HDAC9-229ENST00000622668 HIST1H2BDP58876 126 aa6.59□□□□□ -1.35
HDAC9-229ENST00000622668 HIST1H2BCP62807 126 aa6.59□□□□□ -1.35
HDAC9-229ENST00000622668 HIST2H2BEQ16778 126 aa6.59□□□□□ -1.35
HDAC9-229ENST00000622668 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-229ENST00000622668 HIST1H2BHQ93079 126 aa6.59□□□□□ -1.35
HDAC9-229ENST00000622668 HIST1H2BNQ99877 126 aa6.59□□□□□ -1.35
HDAC9-229ENST00000622668 HIST1H2BMQ99879 126 aa6.59□□□□□ -1.35
HDAC9-229ENST00000622668 C1orf134Q5TEV5 83 aa6.59□□□□□ -1.35
HDAC9-229ENST00000622668 LINC00322Q6ZN03 302 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-229ENST00000622668 GAGE10A6NGK3 116 aa6.59□□□□□ -1.36
HDAC9-229ENST00000622668 VPS25Q9BRG1 176 aa6.59□□□□□ -1.36
HDAC9-229ENST00000622668 F8WEM9 126 aa6.58□□□□□ -1.36
HDAC9-229ENST00000622668 ADCYAP1P18509 176 aa6.58□□□□□ -1.36
HDAC9-229ENST00000622668 KRTAP10-3P60369 221 aa6.58□□□□□ -1.36
HDAC9-229ENST00000622668 Q9H8V8 135 aa6.58□□□□□ -1.36
HDAC9-229ENST00000622668 NDUFA12Q9UI09 145 aa6.58□□□□□ -1.36
HDAC9-229ENST00000622668 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
HDAC9-229ENST00000622668 A0A0J9YXV3 536 aa6.58□□□□□ -1.36
HDAC9-229ENST00000622668 OVOL2Q9BRP0 275 aa6.58□□□□□ -1.36
HDAC9-229ENST00000622668 DNAH14Q0VDD8 3507 aa6.58□□□□□ -1.36
HDAC9-229ENST00000622668 CTRLP40313 264 aa6.58□□□□□ -1.36
HDAC9-229ENST00000622668 CBY1Q9Y3M2 126 aa6.58□□□□□ -1.36
HDAC9-229ENST00000622668 LEPROTO15243 131 aa6.57□□□□□ -1.36
HDAC9-229ENST00000622668 LELP1Q5T871 98 aa6.57□□□□□ -1.36
HDAC9-229ENST00000622668 BOD1L2Q8IYS8 172 aa6.57□□□□□ -1.36
HDAC9-229ENST00000622668 RS1O15537 224 aa6.57□□□□□ -1.36
HDAC9-229ENST00000622668 GHRHP01286 108 aa6.56□□□□□ -1.36
HDAC9-229ENST00000622668 RBX1P62877 108 aa6.56□□□□□ -1.36
HDAC9-229ENST00000622668 NEXN-AS1Q8NBZ9 246 aa6.56□□□□□ -1.36
HDAC9-229ENST00000622668 MRPL35Q9NZE8 188 aaKnown RBP6.56□□□□□ -1.36
HDAC9-229ENST00000622668 CHCHD10Q8WYQ3 142 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms