RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 GTF2H5Q6ZYL4 71 aa16.49■□□□□ 0.23
NKX2-3-202ENST00000622383 IL17DQ8TAD2 202 aa16.49■□□□□ 0.23
NKX2-3-202ENST00000622383 RNASE8Q8TDE3 154 aaKnown RBP16.49■□□□□ 0.23
NKX2-3-202ENST00000622383 MTORP42345 2549 aa16.49■□□□□ 0.23
NKX2-3-202ENST00000622383 IGHV3OR16-12A0A075B7B8 117 aa16.49■□□□□ 0.23
NKX2-3-202ENST00000622383 SAP30O75446 220 aa16.49■□□□□ 0.23
NKX2-3-202ENST00000622383 PYGO1Q9Y3Y4 419 aa16.49■□□□□ 0.23
NKX2-3-202ENST00000622383 SMR3AQ99954 134 aa16.48■□□□□ 0.23
NKX2-3-202ENST00000622383 C12orf74Q32Q52 190 aa16.47■□□□□ 0.23
NKX2-3-202ENST00000622383 VCX2Q9H322 139 aa16.47■□□□□ 0.23
NKX2-3-202ENST00000622383 WNK1Q9H4A3 2382 aa16.47■□□□□ 0.23
NKX2-3-202ENST00000622383 SETD2Q9BYW2 2564 aaPredicted RBP16.47■□□□□ 0.23
NKX2-3-202ENST00000622383 GAGE12BA1L429 117 aa16.47■□□□□ 0.23
NKX2-3-202ENST00000622383 IGLV1-51P01701 117 aa16.46■□□□□ 0.23
NKX2-3-202ENST00000622383 SCGB1D4Q6XE38 83 aa16.46■□□□□ 0.23
NKX2-3-202ENST00000622383 CHCHD7Q9BUK0 85 aa16.46■□□□□ 0.23
NKX2-3-202ENST00000622383 NDUFA7O95182 113 aa16.46■□□□□ 0.22
NKX2-3-202ENST00000622383 GIG44P09565 113 aaPredicted RBP16.45■□□□□ 0.22
NKX2-3-202ENST00000622383 FABP2P12104 132 aa16.45■□□□□ 0.22
NKX2-3-202ENST00000622383 CEMP1Q6PRD7 247 aaPredicted RBP16.45■□□□□ 0.22
NKX2-3-202ENST00000622383 DNAJC30Q96LL9 226 aa16.45■□□□□ 0.22
NKX2-3-202ENST00000622383 AMELXQ99217 191 aa16.45■□□□□ 0.22
NKX2-3-202ENST00000622383 SPCS1Q9Y6A9 102 aa16.45■□□□□ 0.22
NKX2-3-202ENST00000622383 A0A0J9YXV3 536 aa16.44■□□□□ 0.22
NKX2-3-202ENST00000622383 A0A1B0GWB2 263 aa16.44■□□□□ 0.22
NKX2-3-202ENST00000622383 TMEM223A0PJW6 202 aa16.44■□□□□ 0.22
NKX2-3-202ENST00000622383 A0A0J9YY99 117 aa16.44■□□□□ 0.22
NKX2-3-202ENST00000622383 ZNF22P17026 224 aaPredicted RBP16.44■□□□□ 0.22
NKX2-3-202ENST00000622383 C19orf73Q9NVV2 129 aa16.44■□□□□ 0.22
NKX2-3-202ENST00000622383 CMC4P56277 68 aaPredicted RBP16.43■□□□□ 0.22
NKX2-3-202ENST00000622383 WFDC10AQ9H1F0 79 aa16.43■□□□□ 0.22
NKX2-3-202ENST00000622383 IGLL5B9A064 214 aa16.42■□□□□ 0.22
NKX2-3-202ENST00000622383 J3QQQ9 107 aa16.42■□□□□ 0.22
NKX2-3-202ENST00000622383 TRGV1A0A0A0MS02 117 aa16.42■□□□□ 0.22
NKX2-3-202ENST00000622383 SETXQ7Z333 2677 aaKnown RBP16.42■□□□□ 0.22
NKX2-3-202ENST00000622383 IGHV3-38A0A0C4DH36 116 aa16.41■□□□□ 0.22
NKX2-3-202ENST00000622383 CRYBA4P53673 196 aa16.41■□□□□ 0.22
NKX2-3-202ENST00000622383 OR5A1Q8NGJ0 315 aa16.41■□□□□ 0.22
NKX2-3-202ENST00000622383 FAM110AQ9BQ89 295 aa16.41■□□□□ 0.22
NKX2-3-202ENST00000622383 UBE2D4Q9Y2X8 147 aa16.41■□□□□ 0.22
NKX2-3-202ENST00000622383 TMEM263Q8WUH6 116 aaKnown RBP16.4■□□□□ 0.22
NKX2-3-202ENST00000622383 LEPROTO15243 131 aa16.4■□□□□ 0.22
NKX2-3-202ENST00000622383 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.39■□□□□ 0.21
NKX2-3-202ENST00000622383 IGKV2-29A2NJV5 120 aaPredicted RBP16.39■□□□□ 0.21
NKX2-3-202ENST00000622383 SRSF9Q13242 221 aaKnown RBP eCLIP16.39■□□□□ 0.21
NKX2-3-202ENST00000622383 Q6ZTI0 123 aa16.39■□□□□ 0.21
NKX2-3-202ENST00000622383 ZNF479Q96JC4 524 aa16.39■□□□□ 0.21
NKX2-3-202ENST00000622383 MRPS36P82909 103 aaKnown RBP16.38■□□□□ 0.21
NKX2-3-202ENST00000622383 SPANXA1Q9NS26 97 aa16.38■□□□□ 0.21
NKX2-3-202ENST00000622383 LGALS3P17931 250 aaKnown RBP16.38■□□□□ 0.21
NKX2-3-202ENST00000622383 KRTAP10-3P60369 221 aa16.38■□□□□ 0.21
NKX2-3-202ENST00000622383 COTL1Q14019 142 aa16.38■□□□□ 0.21
NKX2-3-202ENST00000622383 RNASE13Q5GAN3 156 aaKnown RBP16.38■□□□□ 0.21
NKX2-3-202ENST00000622383 NOTCH2Q04721 2471 aa16.38■□□□□ 0.21
NKX2-3-202ENST00000622383 SLC25A29Q8N8R3 303 aa16.37■□□□□ 0.21
NKX2-3-202ENST00000622383 FOSL1P15407 271 aa16.37■□□□□ 0.21
NKX2-3-202ENST00000622383 RBX1P62877 108 aa16.37■□□□□ 0.21
NKX2-3-202ENST00000622383 SPANXB1Q9NS25 103 aaPredicted RBP16.37■□□□□ 0.21
NKX2-3-202ENST00000622383 RPL35AP18077 110 aaKnown RBP16.36■□□□□ 0.21
NKX2-3-202ENST00000622383 OCIAD2Q56VL3 154 aa16.36■□□□□ 0.21
NKX2-3-202ENST00000622383 IGHV3-64A0A075B6Q5 118 aa16.35■□□□□ 0.21
NKX2-3-202ENST00000622383 LY6G6DO95868 133 aa16.35■□□□□ 0.21
NKX2-3-202ENST00000622383 RRN3P1Q2M238 152 aa16.35■□□□□ 0.21
NKX2-3-202ENST00000622383 PLAC8L1A1L4L8 177 aa16.35■□□□□ 0.21
NKX2-3-202ENST00000622383 UBE2D1P51668 147 aa16.35■□□□□ 0.21
NKX2-3-202ENST00000622383 NOP10Q9NPE3 64 aaKnown RBP16.34■□□□□ 0.21
NKX2-3-202ENST00000622383 TRAV4A0A0B4J268 109 aa16.33■□□□□ 0.21
NKX2-3-202ENST00000622383 TMEM238LA0A1B0GVL6 79 aa16.33■□□□□ 0.21
NKX2-3-202ENST00000622383 A6NJY4 79 aa16.33■□□□□ 0.21
NKX2-3-202ENST00000622383 IGHV3-30P01768 117 aa16.33■□□□□ 0.21
NKX2-3-202ENST00000622383 IGHV3-30-5P0DP03 117 aa16.33■□□□□ 0.21
NKX2-3-202ENST00000622383 DAZ2Q13117 558 aaKnown RBP16.33■□□□□ 0.21
NKX2-3-202ENST00000622383 Q6ZUT4 128 aa16.33■□□□□ 0.21
NKX2-3-202ENST00000622383 CSNK1G2-AS1Q8NCQ2 148 aa16.33■□□□□ 0.21
NKX2-3-202ENST00000622383 HIVEP2P31629 2446 aa16.32■□□□□ 0.2
NKX2-3-202ENST00000622383 JMJD1CQ15652 2540 aa16.32■□□□□ 0.2
NKX2-3-202ENST00000622383 K7EQD1 137 aa16.31■□□□□ 0.2
NKX2-3-202ENST00000622383 NDUFA11Q86Y39 141 aa16.31■□□□□ 0.2
NKX2-3-202ENST00000622383 TRBV10-1A0A0K0K1A3 114 aa16.31■□□□□ 0.2
NKX2-3-202ENST00000622383 TINCRA0A1B0GVN0 87 aa16.31■□□□□ 0.2
NKX2-3-202ENST00000622383 C16orf74Q96GX8 76 aa16.31■□□□□ 0.2
NKX2-3-202ENST00000622383 IGHV3-30-3P0DP02 117 aa16.3■□□□□ 0.2
NKX2-3-202ENST00000622383 C10orf126Q8N4M7 172 aa16.29■□□□□ 0.2
NKX2-3-202ENST00000622383 C1QTNF4Q9BXJ3 329 aa16.29■□□□□ 0.2
NKX2-3-202ENST00000622383 PGPEP1Q9NXJ5 209 aa16.29■□□□□ 0.2
NKX2-3-202ENST00000622383 RPL36AP83881 106 aaKnown RBP16.28■□□□□ 0.2
NKX2-3-202ENST00000622383 RPL36ALQ969Q0 106 aaKnown RBP16.28■□□□□ 0.2
NKX2-3-202ENST00000622383 TIMM21Q9BVV7 248 aa16.28■□□□□ 0.2
NKX2-3-202ENST00000622383 TRAV8-3A0A0A6YYJ7 113 aa16.27■□□□□ 0.2
NKX2-3-202ENST00000622383 OTOGQ6ZRI0 2925 aa16.27■□□□□ 0.2
NKX2-3-202ENST00000622383 NTM-AS1Q6ZSK4 140 aa16.27■□□□□ 0.19
NKX2-3-202ENST00000622383 LINC00482Q8N8I6 264 aa16.27■□□□□ 0.19
NKX2-3-202ENST00000622383 UBE2D3P61077 147 aa16.26■□□□□ 0.19
NKX2-3-202ENST00000622383 UBE2D2P62837 147 aa16.26■□□□□ 0.19
NKX2-3-202ENST00000622383 IGHV1-58A0A0C4DH39 117 aa16.26■□□□□ 0.19
NKX2-3-202ENST00000622383 OVOL2Q9BRP0 275 aa16.26■□□□□ 0.19
NKX2-3-202ENST00000622383 GAGE7O76087 117 aa16.25■□□□□ 0.19
NKX2-3-202ENST00000622383 APOMO95445 188 aa16.25■□□□□ 0.19
NKX2-3-202ENST00000622383 GAGE12FP0CL80 117 aa16.25■□□□□ 0.19
NKX2-3-202ENST00000622383 GAGE12GP0CL81 117 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms