RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CXCL8P10145 99 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 SSR2P43308 183 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 SNRPD3P62318 126 aaKnown RBP1.74□□□□□ -2.13
CPNE3-213ENST00000622183 UBE2L3P68036 154 aaKnown RBP1.74□□□□□ -2.13
CPNE3-213ENST00000622183 ETDBQ3ZM63 59 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 CFAP126Q5VTH2 177 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 CYSTM1Q9H1C7 97 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 SLIT1O75093 1534 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 CD163L1Q9NR16 1453 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 RTTNQ86VV8 2226 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 SCN7AQ01118 1682 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 NUMA1Q14980 2115 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 SAMD9LQ8IVG5 1584 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 PAPPA2Q9BXP8 1791 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 NEXMIFQ5QGS0 1516 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 TRBV6-7A0A0A0MS04 114 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 TRAV14DV4A0A0A6YYC5 116 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 TRAV17A0A0B4J275 112 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 A0A0D9SFI3 127 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 OR1I1O60431 355 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 BCE1O60756 84 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 TPT1P13693 172 aaKnown RBP1.73□□□□□ -2.13
CPNE3-213ENST00000622183 CCL8P80075 99 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 NMSQ5H8A3 153 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 MIC13Q5XKP0 118 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 PATE2Q6UY27 113 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 C5orf38Q86SI9 138 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 DEFB119Q8N690 84 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 Q8N8P6 123 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 TSKUQ8WUA8 353 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 DSCR8Q96T75 97 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 TRGV9Q99603 122 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 EPDR1Q9UM22 224 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 NRAPQ86VF7 1730 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 DLG5Q8TDM6 1919 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 DOCK11Q5JSL3 2073 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 NHSL1Q5SYE7 1610 aa1.73□□□□□ -2.13
CPNE3-213ENST00000622183 GREB1Q4ZG55 1949 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 KANTRA0A1W2PQU2 76 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 WFDC2Q14508 124 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 DEFB121Q5J5C9 76 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 PSMG4Q5JS54 123 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 SOSTDC1Q6X4U4 206 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 ATP11AUNQ6ZP68 121 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 SERP2Q8N6R1 65 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 AQP3Q92482 292 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 ODF3Q96PU9 254 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 MGST2Q99735 147 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 SIP14410 1827 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 ZFC3H1O60293 1989 aaKnown RBP1.72□□□□□ -2.13
CPNE3-213ENST00000622183 PTPRSQ13332 1948 aa1.72□□□□□ -2.13
CPNE3-213ENST00000622183 SDK1Q7Z5N4 2213 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 IGKV1D-42A0A075B6H8 117 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 NAP1L6A6NFF2 107 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 UMAD1C9J7I0 102 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 F2Z2F3 143 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 H3BUT2 72 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 M0R129 80 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 GNGT2O14610 69 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 ACYP1P07311 99 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 SAA1P0DJI8 122 aaPredicted RBP1.71□□□□□ -2.14
CPNE3-213ENST00000622183 LSM3P62310 102 aaKnown RBP1.71□□□□□ -2.14
CPNE3-213ENST00000622183 SMIM5Q71RC9 77 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 C3orf56Q8N813 242 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 ZNF714Q96N38 554 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 NPCDR1Q9BY65 106 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 HIGD1BQ9P298 99 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 ANKRD36A6QL64 1941 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 NINQ8N4C6 2090 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 DDX60LQ5H9U9 1706 aaKnown RBP1.71□□□□□ -2.14
CPNE3-213ENST00000622183 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.71□□□□□ -2.14
CPNE3-213ENST00000622183 TRIOBPQ9H2D6 2365 aa1.71□□□□□ -2.14
CPNE3-213ENST00000622183 LAMA4Q16363 1823 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 SNRNP200O75643 2136 aaKnown RBP1.7□□□□□ -2.14
CPNE3-213ENST00000622183 TRAV1-1A0A0B4J248 108 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 hADV29S1A0JD25 119 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 CCL16O15467 120 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 NDUFC1O43677 76 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 CCKP06307 115 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 COX8AP10176 69 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 SNRPFP62306 86 aaKnown RBP1.7□□□□□ -2.14
CPNE3-213ENST00000622183 DYNLT1P63172 113 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 KLKP1Q107X0 134 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 OTOGLQ3ZCN5 2332 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 SPANXN5Q5MJ07 72 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 RICTORQ6R327 1708 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 C10orf105Q8TEF2 133 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 TAS2R4Q9NYW5 299 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 TOGARAM1Q9Y4F4 1720 aa1.7□□□□□ -2.14
CPNE3-213ENST00000622183 DUOX1Q9NRD9 1551 aa1.69□□□□□ -2.14
CPNE3-213ENST00000622183 KIAA1549LQ6ZVL6 1849 aa1.69□□□□□ -2.14
CPNE3-213ENST00000622183 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.69□□□□□ -2.14
CPNE3-213ENST00000622183 TRAV3A0A0B4J244 114 aa1.69□□□□□ -2.14
CPNE3-213ENST00000622183 TCRBV4S1A1TA0A5B7 111 aa1.69□□□□□ -2.14
CPNE3-213ENST00000622183 IGKV2-29A2NJV5 120 aaPredicted RBP1.69□□□□□ -2.14
CPNE3-213ENST00000622183 H7BZZ5 65 aa1.69□□□□□ -2.14
CPNE3-213ENST00000622183 K7ERJ3 54 aa1.69□□□□□ -2.14
CPNE3-213ENST00000622183 TIMM17BO60830 172 aa1.69□□□□□ -2.14
CPNE3-213ENST00000622183 ASAH2BP0C7U1 165 aa1.69□□□□□ -2.14
CPNE3-213ENST00000622183 KRTDAPP60985 99 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms