RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 TIRAPP58753 221 aa6.96□□□□□ -1.3
IGHV3-54-201ENST00000622166 Q6ZSV7 163 aa6.96□□□□□ -1.3
IGHV3-54-201ENST00000622166 MTURNQ8N3F0 131 aa6.96□□□□□ -1.3
IGHV3-54-201ENST00000622166 IL17DQ8TAD2 202 aa6.96□□□□□ -1.3
IGHV3-54-201ENST00000622166 RNF183Q96D59 192 aa6.96□□□□□ -1.3
IGHV3-54-201ENST00000622166 Q96MF0 132 aa6.96□□□□□ -1.3
IGHV3-54-201ENST00000622166 LINC01600Q96MT4 127 aa6.96□□□□□ -1.3
IGHV3-54-201ENST00000622166 ERG28Q9UKR5 140 aa6.96□□□□□ -1.3
IGHV3-54-201ENST00000622166 CHD8Q9HCK8 2581 aa6.96□□□□□ -1.3
IGHV3-54-201ENST00000622166 IGLV5-45A0A087WSX0 123 aa6.95□□□□□ -1.3
IGHV3-54-201ENST00000622166 TIMM17BO60830 172 aa6.95□□□□□ -1.3
IGHV3-54-201ENST00000622166 PRM2P04554 102 aa6.95□□□□□ -1.3
IGHV3-54-201ENST00000622166 AZU1P20160 251 aa6.95□□□□□ -1.3
IGHV3-54-201ENST00000622166 INSL3P51460 131 aa6.95□□□□□ -1.3
IGHV3-54-201ENST00000622166 TEN1Q86WV5 123 aa6.95□□□□□ -1.3
IGHV3-54-201ENST00000622166 ZNF843Q8N446 348 aa6.95□□□□□ -1.3
IGHV3-54-201ENST00000622166 PPDPFLQ8WWR9 84 aa6.95□□□□□ -1.3
IGHV3-54-201ENST00000622166 VSIG2Q96IQ7 327 aa6.95□□□□□ -1.3
IGHV3-54-201ENST00000622166 CARD19Q96LW7 228 aa6.95□□□□□ -1.3
IGHV3-54-201ENST00000622166 BBC3Q96PG8 261 aaPredicted RBP6.95□□□□□ -1.3
IGHV3-54-201ENST00000622166 Q9UF83 564 aa6.95□□□□□ -1.3
IGHV3-54-201ENST00000622166 IGHV3-64A0A075B6Q5 118 aa6.94□□□□□ -1.3
IGHV3-54-201ENST00000622166 FHL3Q13643 280 aa6.94□□□□□ -1.3
IGHV3-54-201ENST00000622166 ODF3L2Q3SX64 289 aa6.94□□□□□ -1.3
IGHV3-54-201ENST00000622166 CEMP1Q6PRD7 247 aaPredicted RBP6.94□□□□□ -1.3
IGHV3-54-201ENST00000622166 Q6ZUT4 128 aa6.94□□□□□ -1.3
IGHV3-54-201ENST00000622166 FAM19A3Q7Z5A8 133 aa6.94□□□□□ -1.3
IGHV3-54-201ENST00000622166 C1orf158Q8N1D5 194 aa6.94□□□□□ -1.3
IGHV3-54-201ENST00000622166 NDUFA12Q9UI09 145 aa6.94□□□□□ -1.3
IGHV3-54-201ENST00000622166 RELNP78509 3460 aa6.94□□□□□ -1.3
IGHV3-54-201ENST00000622166 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 TRAV8-3A0A0A6YYJ7 113 aa6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 TRBV30A0A0K0K1B3 111 aa6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 IGKV2-29A2NJV5 120 aaPredicted RBP6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 SCGB1C2P0DMR2 95 aa6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 CMC4P56277 68 aaPredicted RBP6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 MIAQ16674 131 aa6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 KHDC1LQ5JSQ8 128 aa6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 ZFAND6Q6FIF0 208 aa6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 SFTA2Q6UW10 78 aa6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 ZNF418Q8TF45 676 aaPredicted RBP6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 GTSF1LQ9H1H1 148 aa6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 YAE1D1Q9NRH1 226 aa6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 CACNA1AO00555 2505 aa6.93□□□□□ -1.3
IGHV3-54-201ENST00000622166 TRBV10-1A0A0K0K1A3 114 aa6.92□□□□□ -1.3
IGHV3-54-201ENST00000622166 IFITM1P13164 125 aa6.92□□□□□ -1.3
IGHV3-54-201ENST00000622166 CDIP1Q9H305 208 aa6.92□□□□□ -1.3
IGHV3-54-201ENST00000622166 GEMIN7Q9H840 131 aaKnown RBP6.92□□□□□ -1.3
IGHV3-54-201ENST00000622166 CSMD1Q96PZ7 3565 aa6.92□□□□□ -1.3
IGHV3-54-201ENST00000622166 SPG11Q96JI7 2443 aa6.91□□□□□ -1.3
IGHV3-54-201ENST00000622166 DNAJC9-AS1A6NH13 148 aa6.91□□□□□ -1.3
IGHV3-54-201ENST00000622166 NDUFA1O15239 70 aa6.91□□□□□ -1.3
IGHV3-54-201ENST00000622166 SPINK8P0C7L1 97 aa6.91□□□□□ -1.3
IGHV3-54-201ENST00000622166 ATXN8Q156A1 80 aa6.91□□□□□ -1.3
IGHV3-54-201ENST00000622166 RNASE13Q5GAN3 156 aaKnown RBP6.91□□□□□ -1.3
IGHV3-54-201ENST00000622166 ADAMTSL4-AS1Q5T5F5 129 aa6.91□□□□□ -1.3
IGHV3-54-201ENST00000622166 STHQ8IWL8 128 aa6.91□□□□□ -1.3
IGHV3-54-201ENST00000622166 XCL2Q9UBD3 114 aa6.91□□□□□ -1.3
IGHV3-54-201ENST00000622166 CSDC2Q9Y534 153 aaKnown RBP6.91□□□□□ -1.3
IGHV3-54-201ENST00000622166 SORL1Q92673 2214 aa6.91□□□□□ -1.3
IGHV3-54-201ENST00000622166 TRAV4A0A0B4J268 109 aa6.9□□□□□ -1.3
IGHV3-54-201ENST00000622166 IGHV3-38A0A0C4DH36 116 aa6.9□□□□□ -1.3
IGHV3-54-201ENST00000622166 IGLV5-39A0A0G2JS06 123 aa6.9□□□□□ -1.3
IGHV3-54-201ENST00000622166 ADARB2-AS1A8MUL3 147 aa6.9□□□□□ -1.3
IGHV3-54-201ENST00000622166 CCL24O00175 119 aa6.9□□□□□ -1.3
IGHV3-54-201ENST00000622166 SLC25A20O43772 301 aa6.9□□□□□ -1.3
IGHV3-54-201ENST00000622166 SMAGPQ0VAQ4 97 aa6.9□□□□□ -1.3
IGHV3-54-201ENST00000622166 LINC01620Q4KN68 170 aa6.9□□□□□ -1.3
IGHV3-54-201ENST00000622166 ANKRD29Q8N6D5 301 aa6.9□□□□□ -1.3
IGHV3-54-201ENST00000622166 C16orf95Q9H693 158 aa6.9□□□□□ -1.3
IGHV3-54-201ENST00000622166 USP9XQ93008 2570 aaPredicted RBP6.9□□□□□ -1.31
IGHV3-54-201ENST00000622166 ASH1LQ9NR48 2969 aaKnown RBP6.9□□□□□ -1.31
IGHV3-54-201ENST00000622166 IGHV3OR16-12A0A075B7B8 117 aa6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 K7EQD1 137 aa6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 CIDEAO60543 219 aa6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 HERVK_113P63121 156 aa6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 RPL36AP83881 106 aaKnown RBP6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 DAZ2Q13117 558 aaKnown RBP6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 DGAT2L7PQ6IED9 249 aa6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 DAZ4Q86SG3 579 aaKnown RBP6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 RPL36ALQ969Q0 106 aaKnown RBP6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 TMEM101Q96IK0 257 aa6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 FAM110AQ9BQ89 295 aa6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 DAZ3Q9NR90 486 aaKnown RBP6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 CDKN2A-AS1Q9UH64 79 aa6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 PIEZO1Q92508 2521 aa6.89□□□□□ -1.31
IGHV3-54-201ENST00000622166 TRGV1A0A0A0MS02 117 aa6.88□□□□□ -1.31
IGHV3-54-201ENST00000622166 C9JAW5 83 aa6.88□□□□□ -1.31
IGHV3-54-201ENST00000622166 TRIAP1O43715 76 aa6.88□□□□□ -1.31
IGHV3-54-201ENST00000622166 PRSS2P07478 247 aa6.88□□□□□ -1.31
IGHV3-54-201ENST00000622166 Q1RN00 199 aa6.88□□□□□ -1.31
IGHV3-54-201ENST00000622166 LINC00242Q5T6M2 205 aa6.88□□□□□ -1.31
IGHV3-54-201ENST00000622166 PPDPFQ9H3Y8 114 aa6.88□□□□□ -1.31
IGHV3-54-201ENST00000622166 ICOSQ9Y6W8 199 aa6.88□□□□□ -1.31
IGHV3-54-201ENST00000622166 ANKRD17O75179 2603 aaKnown RBP6.88□□□□□ -1.31
IGHV3-54-201ENST00000622166 TRBV10-2A0A0K0K1G8 114 aa6.87□□□□□ -1.31
IGHV3-54-201ENST00000622166 A8MZ25 164 aa6.87□□□□□ -1.31
IGHV3-54-201ENST00000622166 TMEM262E9PQX1 116 aa6.87□□□□□ -1.31
IGHV3-54-201ENST00000622166 H7C2G1 150 aa6.87□□□□□ -1.31
IGHV3-54-201ENST00000622166 COX6A2Q02221 97 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms