RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 NIT2Q9NQR4 276 aa12.03□□□□□ -0.48
SCAMP4-213ENST00000621748 TRBV7-3A0A075B6L6 115 aa12.02□□□□□ -0.49
SCAMP4-213ENST00000621748 MT-ND6P03923 174 aa12.02□□□□□ -0.49
SCAMP4-213ENST00000621748 LRCOL1A6NCL2 159 aa12.01□□□□□ -0.49
SCAMP4-213ENST00000621748 M0QY20 66 aa12.01□□□□□ -0.49
SCAMP4-213ENST00000621748 HLA-DQA1P01909 254 aa12.01□□□□□ -0.49
SCAMP4-213ENST00000621748 APCSP02743 223 aa12.01□□□□□ -0.49
SCAMP4-213ENST00000621748 PPBPP02775 128 aa12.01□□□□□ -0.49
SCAMP4-213ENST00000621748 ELOBQ15370 118 aa12.01□□□□□ -0.49
SCAMP4-213ENST00000621748 CDPF1Q6NVV7 123 aa12.01□□□□□ -0.49
SCAMP4-213ENST00000621748 GATD1Q8NB37 220 aa12.01□□□□□ -0.49
SCAMP4-213ENST00000621748 GNB1LQ9BYB4 327 aa12.01□□□□□ -0.49
SCAMP4-213ENST00000621748 TRBV24-1A0A075B6N3 115 aa12□□□□□ -0.49
SCAMP4-213ENST00000621748 TGIF2-C20orf24A0A0A6YYL0 155 aa12□□□□□ -0.49
SCAMP4-213ENST00000621748 TRAV26-2A0A0B4J265 109 aa12□□□□□ -0.49
SCAMP4-213ENST00000621748 PSCAO43653 123 aa12□□□□□ -0.49
SCAMP4-213ENST00000621748 MRPL51Q4U2R6 128 aaKnown RBP12□□□□□ -0.49
SCAMP4-213ENST00000621748 CBLN2Q8IUK8 224 aa12□□□□□ -0.49
SCAMP4-213ENST00000621748 ST20Q9HBF5 79 aa12□□□□□ -0.49
SCAMP4-213ENST00000621748 TMEM97Q5BJF2 176 aa11.99□□□□□ -0.49
SCAMP4-213ENST00000621748 ORMDL3Q8N138 153 aa11.99□□□□□ -0.49
SCAMP4-213ENST00000621748 KRTAP10-1P60331 282 aa11.98□□□□□ -0.49
SCAMP4-213ENST00000621748 FABP9Q0Z7S8 132 aa11.98□□□□□ -0.49
SCAMP4-213ENST00000621748 LAGE3Q14657 143 aa11.98□□□□□ -0.49
SCAMP4-213ENST00000621748 TMEM136Q6ZRR5 245 aa11.98□□□□□ -0.49
SCAMP4-213ENST00000621748 DAZ4Q86SG3 579 aaKnown RBP11.98□□□□□ -0.49
SCAMP4-213ENST00000621748 Q8N1X5 172 aa11.98□□□□□ -0.49
SCAMP4-213ENST00000621748 NEXN-AS1Q8NBZ9 246 aa11.98□□□□□ -0.49
SCAMP4-213ENST00000621748 RNF185Q96GF1 192 aa11.98□□□□□ -0.49
SCAMP4-213ENST00000621748 DAZ3Q9NR90 486 aaKnown RBP11.98□□□□□ -0.49
SCAMP4-213ENST00000621748 TRAPPC1Q9Y5R8 145 aa11.98□□□□□ -0.49
SCAMP4-213ENST00000621748 FAT1Q14517 4588 aa11.98□□□□□ -0.49
SCAMP4-213ENST00000621748 DNAH8Q96JB1 4490 aa11.97□□□□□ -0.49
SCAMP4-213ENST00000621748 D6R8Y8 96 aa11.97□□□□□ -0.49
SCAMP4-213ENST00000621748 SMKR1H3BMG3 65 aa11.96□□□□□ -0.49
SCAMP4-213ENST00000621748 NCR2O95944 276 aa11.96□□□□□ -0.49
SCAMP4-213ENST00000621748 PMCHP20382 165 aa11.96□□□□□ -0.49
SCAMP4-213ENST00000621748 UBE2D3P61077 147 aa11.96□□□□□ -0.49
SCAMP4-213ENST00000621748 UBE2D2P62837 147 aa11.96□□□□□ -0.49
SCAMP4-213ENST00000621748 PRELID3AQ96N28 172 aa11.96□□□□□ -0.49
SCAMP4-213ENST00000621748 MRPL18Q9H0U6 180 aaKnown RBP11.96□□□□□ -0.49
SCAMP4-213ENST00000621748 XGP55808 180 aa11.95□□□□□ -0.5
SCAMP4-213ENST00000621748 NIT1Q86X76 327 aa11.95□□□□□ -0.5
SCAMP4-213ENST00000621748 RPL39LQ96EH5 51 aaKnown RBP11.95□□□□□ -0.5
SCAMP4-213ENST00000621748 LAMTOR2Q9Y2Q5 125 aa11.95□□□□□ -0.5
SCAMP4-213ENST00000621748 C20orf78Q9BR46 151 aa11.94□□□□□ -0.5
SCAMP4-213ENST00000621748 TRAV8-3A0A0A6YYJ7 113 aa11.93□□□□□ -0.5
SCAMP4-213ENST00000621748 TRBV6-5A0A0K0K1A5 114 aa11.93□□□□□ -0.5
SCAMP4-213ENST00000621748 VCYO14598 125 aa11.93□□□□□ -0.5
SCAMP4-213ENST00000621748 PHOX2AO14813 284 aa11.93□□□□□ -0.5
SCAMP4-213ENST00000621748 TNFRSF6BO95407 300 aa11.93□□□□□ -0.5
SCAMP4-213ENST00000621748 GCSHP23434 173 aa11.93□□□□□ -0.5
SCAMP4-213ENST00000621748 COTL1Q14019 142 aa11.93□□□□□ -0.5
SCAMP4-213ENST00000621748 Q8N814 137 aa11.93□□□□□ -0.5
SCAMP4-213ENST00000621748 TM2D2Q9BX73 214 aa11.93□□□□□ -0.5
SCAMP4-213ENST00000621748 MAP1LC3AQ9H492 121 aa11.93□□□□□ -0.5
SCAMP4-213ENST00000621748 SDHAF1A6NFY7 115 aa11.92□□□□□ -0.5
SCAMP4-213ENST00000621748 I3L3M4 83 aa11.92□□□□□ -0.5
SCAMP4-213ENST00000621748 FCER1GP30273 86 aa11.92□□□□□ -0.5
SCAMP4-213ENST00000621748 RPS10P46783 165 aaKnown RBP11.92□□□□□ -0.5
SCAMP4-213ENST00000621748 SUMO2P61956 95 aaKnown RBP11.92□□□□□ -0.5
SCAMP4-213ENST00000621748 WFDC2Q14508 124 aa11.92□□□□□ -0.5
SCAMP4-213ENST00000621748 KIR2DL4Q99706 377 aa11.92□□□□□ -0.5
SCAMP4-213ENST00000621748 IGLV5-52A0A0A0MRZ9 124 aa11.91□□□□□ -0.5
SCAMP4-213ENST00000621748 TCAPO15273 167 aa11.91□□□□□ -0.5
SCAMP4-213ENST00000621748 SCO1O75880 301 aa11.91□□□□□ -0.5
SCAMP4-213ENST00000621748 KIAA1644Q3SXP7 199 aa11.91□□□□□ -0.5
SCAMP4-213ENST00000621748 KLK12Q9UKR0 248 aa11.91□□□□□ -0.5
SCAMP4-213ENST00000621748 TRBV25-1A0A075B6N4 114 aa11.9□□□□□ -0.5
SCAMP4-213ENST00000621748 TRBV6-8A0A0A6YYG3 113 aa11.9□□□□□ -0.5
SCAMP4-213ENST00000621748 IGHV1-24A0A0C4DH33 117 aa11.9□□□□□ -0.5
SCAMP4-213ENST00000621748 RAB5AP20339 215 aa11.9□□□□□ -0.5
SCAMP4-213ENST00000621748 PKIAP61925 76 aa11.9□□□□□ -0.5
SCAMP4-213ENST00000621748 NTN5Q8WTR8 489 aaPredicted RBP11.9□□□□□ -0.5
SCAMP4-213ENST00000621748 A0A087WX48 190 aa11.89□□□□□ -0.51
SCAMP4-213ENST00000621748 UBE2L6O14933 153 aa11.89□□□□□ -0.51
SCAMP4-213ENST00000621748 NRACQ8N912 160 aa11.89□□□□□ -0.51
SCAMP4-213ENST00000621748 YPEL4Q96NS1 127 aa11.89□□□□□ -0.51
SCAMP4-213ENST00000621748 LOC389332A0A1B0GUA5 103 aa11.88□□□□□ -0.51
SCAMP4-213ENST00000621748 LECT2O14960 151 aa11.88□□□□□ -0.51
SCAMP4-213ENST00000621748 NPYP01303 97 aa11.88□□□□□ -0.51
SCAMP4-213ENST00000621748 AMTP48728 403 aa11.88□□□□□ -0.51
SCAMP4-213ENST00000621748 CHCHD5Q9BSY4 110 aa11.88□□□□□ -0.51
SCAMP4-213ENST00000621748 TMEM70Q9BUB7 260 aa11.88□□□□□ -0.51
SCAMP4-213ENST00000621748 CHCHD7Q9BUK0 85 aa11.88□□□□□ -0.51
SCAMP4-213ENST00000621748 TMEM262E9PQX1 116 aa11.87□□□□□ -0.51
SCAMP4-213ENST00000621748 GAS8-AS1O95177 125 aa11.87□□□□□ -0.51
SCAMP4-213ENST00000621748 SMAGPQ0VAQ4 97 aa11.87□□□□□ -0.51
SCAMP4-213ENST00000621748 PRSS3P2Q8NHM4 247 aa11.87□□□□□ -0.51
SCAMP4-213ENST00000621748 UBE2WQ96B02 151 aa11.87□□□□□ -0.51
SCAMP4-213ENST00000621748 TRBV27A0A0K0K1C4 114 aa11.86□□□□□ -0.51
SCAMP4-213ENST00000621748 NTM-AS1Q6ZSK4 140 aa11.86□□□□□ -0.51
SCAMP4-213ENST00000621748 BAALCQ8WXS3 180 aa11.86□□□□□ -0.51
SCAMP4-213ENST00000621748 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
SCAMP4-213ENST00000621748 SMIM2Q9BVW6 85 aa11.86□□□□□ -0.51
SCAMP4-213ENST00000621748 NXT2Q9NPJ8 142 aaKnown RBP11.86□□□□□ -0.51
SCAMP4-213ENST00000621748 IGKV2D-24A0A075B6R9 120 aa11.85□□□□□ -0.51
SCAMP4-213ENST00000621748 COLCA2A8K830 154 aa11.85□□□□□ -0.51
SCAMP4-213ENST00000621748 POLR2KP53803 58 aaKnown RBP11.85□□□□□ -0.51
SCAMP4-213ENST00000621748 RPL32P62910 135 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms