RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 RNASE8Q8TDE3 154 aaKnown RBP7.54□□□□□ -1.2
VPS11-208ENST00000621676 CHCHD5Q9BSY4 110 aa7.54□□□□□ -1.2
VPS11-208ENST00000621676 NEXN-AS1Q8NBZ9 246 aa7.53□□□□□ -1.2
VPS11-208ENST00000621676 TRAV9-2A0A087WT02 112 aa7.53□□□□□ -1.2
VPS11-208ENST00000621676 TRAV2A0A0B4J234 112 aa7.53□□□□□ -1.2
VPS11-208ENST00000621676 A0A0J9YXV3 536 aa7.53□□□□□ -1.2
VPS11-208ENST00000621676 VCYO14598 125 aa7.53□□□□□ -1.2
VPS11-208ENST00000621676 MPV17L2Q567V2 206 aa7.53□□□□□ -1.2
VPS11-208ENST00000621676 CYSLTR1Q9Y271 337 aa7.53□□□□□ -1.2
VPS11-208ENST00000621676 IGHV4-28A0A0C4DH34 117 aa7.53□□□□□ -1.2
VPS11-208ENST00000621676 TEX43Q6ZNM6 134 aa7.53□□□□□ -1.2
VPS11-208ENST00000621676 DNAJC30Q96LL9 226 aa7.53□□□□□ -1.2
VPS11-208ENST00000621676 C20orf144Q9BQM9 153 aa7.53□□□□□ -1.2
VPS11-208ENST00000621676 U3KQK5 164 aa7.53□□□□□ -1.2
VPS11-208ENST00000621676 IGLV2-18A0A075B6J9 118 aa7.52□□□□□ -1.21
VPS11-208ENST00000621676 LINC00467Q9BRT7 94 aa7.52□□□□□ -1.21
VPS11-208ENST00000621676 TRAV25A0A0B4J276 109 aa7.52□□□□□ -1.21
VPS11-208ENST00000621676 GYPEP15421 78 aa7.52□□□□□ -1.21
VPS11-208ENST00000621676 CFAP161Q6P656 301 aa7.52□□□□□ -1.21
VPS11-208ENST00000621676 MRAP2Q96G30 205 aa7.52□□□□□ -1.21
VPS11-208ENST00000621676 ESDP10768 282 aa7.52□□□□□ -1.21
VPS11-208ENST00000621676 TMEM263Q8WUH6 116 aaKnown RBP7.52□□□□□ -1.21
VPS11-208ENST00000621676 CBY1Q9Y3M2 126 aa7.52□□□□□ -1.21
VPS11-208ENST00000621676 CHTOPQ9Y3Y2 248 aaKnown RBP7.52□□□□□ -1.21
VPS11-208ENST00000621676 TRAV26-1A0A087WT03 109 aa7.51□□□□□ -1.21
VPS11-208ENST00000621676 TRAV8-3A0A0A6YYJ7 113 aa7.51□□□□□ -1.21
VPS11-208ENST00000621676 IGLC3P0DOY3 106 aa7.51□□□□□ -1.21
VPS11-208ENST00000621676 COTL1Q14019 142 aa7.51□□□□□ -1.21
VPS11-208ENST00000621676 AMMECR1LQ6DCA0 310 aa7.51□□□□□ -1.21
VPS11-208ENST00000621676 TOMM7Q9P0U1 55 aa7.51□□□□□ -1.21
VPS11-208ENST00000621676 DAD1P61803 113 aa7.5□□□□□ -1.21
VPS11-208ENST00000621676 COL7A1Q02388 2944 aa7.5□□□□□ -1.21
VPS11-208ENST00000621676 A8MWV9 139 aa7.5□□□□□ -1.21
VPS11-208ENST00000621676 PCP4P48539 62 aa7.5□□□□□ -1.21
VPS11-208ENST00000621676 ODF1Q14990 250 aa7.5□□□□□ -1.21
VPS11-208ENST00000621676 BAALCQ8WXS3 180 aa7.5□□□□□ -1.21
VPS11-208ENST00000621676 VCX2Q9H322 139 aa7.5□□□□□ -1.21
VPS11-208ENST00000621676 I3L3M4 83 aa7.5□□□□□ -1.21
VPS11-208ENST00000621676 IGKCP01834 107 aa7.5□□□□□ -1.21
VPS11-208ENST00000621676 C1QTNF4Q9BXJ3 329 aa7.5□□□□□ -1.21
VPS11-208ENST00000621676 HHLA3Q9XRX5 114 aa7.5□□□□□ -1.21
VPS11-208ENST00000621676 GCSHP23434 173 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 POLR2KP53803 58 aaKnown RBP7.49□□□□□ -1.21
VPS11-208ENST00000621676 SCGB1D4Q6XE38 83 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 Q6ZUT4 128 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 IGHV4-4A0A075B6R2 117 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 C11orf86A6NJI1 115 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 A6NJY4 79 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 TSHBP01222 138 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 RPL36AP83881 106 aaKnown RBP7.49□□□□□ -1.21
VPS11-208ENST00000621676 ORMDL2Q53FV1 153 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 MRPL52Q86TS9 123 aaKnown RBP7.49□□□□□ -1.21
VPS11-208ENST00000621676 MAPKAPK5-AS1Q8N8E1 139 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 DAND5Q8N907 189 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 CSNK1G2-AS1Q8NCQ2 148 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 RPL36ALQ969Q0 106 aaKnown RBP7.49□□□□□ -1.21
VPS11-208ENST00000621676 LINC00526Q96FQ7 95 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 H7C2G1 150 aa7.49□□□□□ -1.21
VPS11-208ENST00000621676 NANOS2P60321 138 aaKnown RBP7.49□□□□□ -1.21
VPS11-208ENST00000621676 PLAC8L1A1L4L8 177 aa7.48□□□□□ -1.21
VPS11-208ENST00000621676 SLC25A34Q6PIV7 304 aa7.48□□□□□ -1.21
VPS11-208ENST00000621676 DNHD1Q96M86 4753 aa7.48□□□□□ -1.21
VPS11-208ENST00000621676 UBE2L6O14933 153 aa7.48□□□□□ -1.21
VPS11-208ENST00000621676 SPINK8P0C7L1 97 aa7.48□□□□□ -1.21
VPS11-208ENST00000621676 COL5A1-AS1Q5SY13 56 aa7.48□□□□□ -1.21
VPS11-208ENST00000621676 PET117Q6UWS5 81 aa7.48□□□□□ -1.21
VPS11-208ENST00000621676 X6R8D5 127 aa7.48□□□□□ -1.21
VPS11-208ENST00000621676 SBSPONQ8IVN8 264 aa7.47□□□□□ -1.21
VPS11-208ENST00000621676 DPM2O94777 84 aa7.47□□□□□ -1.21
VPS11-208ENST00000621676 PRSS2P07478 247 aa7.47□□□□□ -1.21
VPS11-208ENST00000621676 UQCR10Q9UDW1 63 aa7.47□□□□□ -1.21
VPS11-208ENST00000621676 TRBV7-3A0A075B6L6 115 aa7.47□□□□□ -1.21
VPS11-208ENST00000621676 H7C1H1 209 aa7.47□□□□□ -1.21
VPS11-208ENST00000621676 PAX4O43316 350 aa7.47□□□□□ -1.21
VPS11-208ENST00000621676 LINC01545Q5VT33 79 aa7.47□□□□□ -1.21
VPS11-208ENST00000621676 ODF3Q96PU9 254 aa7.47□□□□□ -1.21
VPS11-208ENST00000621676 TRBV7-9A0A0J9YWB2 115 aa7.46□□□□□ -1.21
VPS11-208ENST00000621676 A0A0J9YWU9 116 aa7.46□□□□□ -1.21
VPS11-208ENST00000621676 NTM-AS1Q6ZSK4 140 aa7.46□□□□□ -1.21
VPS11-208ENST00000621676 CHAC1Q9BUX1 264 aa7.46□□□□□ -1.21
VPS11-208ENST00000621676 K7EQD1 137 aa7.46□□□□□ -1.22
VPS11-208ENST00000621676 K7ERJ3 54 aa7.46□□□□□ -1.22
VPS11-208ENST00000621676 ATP5LO75964 103 aa7.46□□□□□ -1.22
VPS11-208ENST00000621676 C5orf38Q86SI9 138 aa7.46□□□□□ -1.22
VPS11-208ENST00000621676 C16orf74Q96GX8 76 aa7.46□□□□□ -1.22
VPS11-208ENST00000621676 PTTG1IPP53801 180 aa7.45□□□□□ -1.22
VPS11-208ENST00000621676 Q6ZTC4 211 aa7.45□□□□□ -1.22
VPS11-208ENST00000621676 C20orf78Q9BR46 151 aa7.45□□□□□ -1.22
VPS11-208ENST00000621676 LAMTOR2Q9Y2Q5 125 aa7.45□□□□□ -1.22
VPS11-208ENST00000621676 CIDEAO60543 219 aa7.45□□□□□ -1.22
VPS11-208ENST00000621676 IGHV3-30P01768 117 aa7.45□□□□□ -1.22
VPS11-208ENST00000621676 IGHV3-33P01772 117 aa7.45□□□□□ -1.22
VPS11-208ENST00000621676 IGHV3-30-3P0DP02 117 aa7.45□□□□□ -1.22
VPS11-208ENST00000621676 IGHV3-30-5P0DP03 117 aa7.45□□□□□ -1.22
VPS11-208ENST00000621676 C20orf203Q8NBC4 194 aa7.45□□□□□ -1.22
VPS11-208ENST00000621676 XCL1P47992 114 aa7.44□□□□□ -1.22
VPS11-208ENST00000621676 SHISA2Q6UWI4 295 aa7.44□□□□□ -1.22
VPS11-208ENST00000621676 TOMM6Q96B49 74 aa7.44□□□□□ -1.22
VPS11-208ENST00000621676 PRADC1Q9BSG0 188 aa7.44□□□□□ -1.22
VPS11-208ENST00000621676 IGLV4-60A0A075B6I1 120 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms