RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 WFDC10AQ9H1F0 79 aa8.5□□□□□ -1.05
CLIP1-219ENST00000620786 CDSNQ15517 529 aa8.49□□□□□ -1.05
CLIP1-219ENST00000620786 TTTY13Q9BZ97 58 aa8.49□□□□□ -1.05
CLIP1-219ENST00000620786 A0A096LNI7 61 aa8.49□□□□□ -1.05
CLIP1-219ENST00000620786 RBM3P98179 157 aaKnown RBP8.49□□□□□ -1.05
CLIP1-219ENST00000620786 IGKV3D-7A0A0C4DH55 119 aa8.49□□□□□ -1.05
CLIP1-219ENST00000620786 JMJD7-PLA2G4BH0Y9G9 81 aa8.49□□□□□ -1.05
CLIP1-219ENST00000620786 NUP210LQ5VU65 1888 aa8.49□□□□□ -1.05
CLIP1-219ENST00000620786 CEP192Q8TEP8 1941 aa8.49□□□□□ -1.05
CLIP1-219ENST00000620786 C14orf132Q9NPU4 83 aa8.48□□□□□ -1.05
CLIP1-219ENST00000620786 A0A0B4J2C4 111 aa8.48□□□□□ -1.05
CLIP1-219ENST00000620786 TRBV6-8A0A0A6YYG3 113 aa8.48□□□□□ -1.05
CLIP1-219ENST00000620786 UBE2D1P51668 147 aa8.48□□□□□ -1.05
CLIP1-219ENST00000620786 WFDC9Q8NEX5 89 aa8.48□□□□□ -1.05
CLIP1-219ENST00000620786 C11orf1Q9H5F2 150 aa8.48□□□□□ -1.05
CLIP1-219ENST00000620786 TMEM256-PLSCR3K7ERE1 68 aa8.48□□□□□ -1.05
CLIP1-219ENST00000620786 ODF1Q14990 250 aa8.48□□□□□ -1.05
CLIP1-219ENST00000620786 LINC01620Q4KN68 170 aa8.48□□□□□ -1.05
CLIP1-219ENST00000620786 OXLD1Q5BKU9 147 aa8.48□□□□□ -1.05
CLIP1-219ENST00000620786 TRBV6-4A0A1B0GX49 114 aa8.47□□□□□ -1.05
CLIP1-219ENST00000620786 KRTAP10-9P60411 292 aa8.47□□□□□ -1.05
CLIP1-219ENST00000620786 KPRPQ5T749 579 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-219ENST00000620786 Q6ZPA2 131 aa8.47□□□□□ -1.05
CLIP1-219ENST00000620786 A0A0J9YWU9 116 aa8.47□□□□□ -1.05
CLIP1-219ENST00000620786 NPSP0C0P6 89 aa8.47□□□□□ -1.05
CLIP1-219ENST00000620786 Q6ZS46 218 aa8.46□□□□□ -1.05
CLIP1-219ENST00000620786 MIAQ16674 131 aa8.46□□□□□ -1.05
CLIP1-219ENST00000620786 NANOS2P60321 138 aaKnown RBP8.46□□□□□ -1.06
CLIP1-219ENST00000620786 EIF4EBP1Q13541 118 aaPredicted RBP8.46□□□□□ -1.06
CLIP1-219ENST00000620786 PTPRQQ9UMZ3 2332 aa8.46□□□□□ -1.06
CLIP1-219ENST00000620786 ALPK3Q96L96 1907 aa8.46□□□□□ -1.06
CLIP1-219ENST00000620786 FAM208BQ5VWN6 2430 aa8.46□□□□□ -1.06
CLIP1-219ENST00000620786 FRMD6-AS1P0C7T7 363 aa8.46□□□□□ -1.06
CLIP1-219ENST00000620786 FXYD2P54710 66 aa8.46□□□□□ -1.06
CLIP1-219ENST00000620786 LINC00322Q6ZN03 302 aaPredicted RBP8.46□□□□□ -1.06
CLIP1-219ENST00000620786 PROK1P58294 105 aa8.45□□□□□ -1.06
CLIP1-219ENST00000620786 MBD6Q96DN6 1003 aa8.45□□□□□ -1.06
CLIP1-219ENST00000620786 NDUFA7O95182 113 aa8.45□□□□□ -1.06
CLIP1-219ENST00000620786 C5orf47Q569G3 176 aa8.45□□□□□ -1.06
CLIP1-219ENST00000620786 IGLC6P0CF74 106 aa8.45□□□□□ -1.06
CLIP1-219ENST00000620786 KIR2DL5BA0A0G2JN68 375 aa8.45□□□□□ -1.06
CLIP1-219ENST00000620786 KIR2DL5BA0A0G2JPC4 375 aa8.45□□□□□ -1.06
CLIP1-219ENST00000620786 SYCNQ0VAF6 134 aa8.45□□□□□ -1.06
CLIP1-219ENST00000620786 KIR2DL5AQ8N109 375 aa8.45□□□□□ -1.06
CLIP1-219ENST00000620786 Q8N6K4 173 aa8.45□□□□□ -1.06
CLIP1-219ENST00000620786 HIGD1BQ9P298 99 aa8.45□□□□□ -1.06
CLIP1-219ENST00000620786 HIVEP2P31629 2446 aa8.45□□□□□ -1.06
CLIP1-219ENST00000620786 CLUHP3Q96NS8 147 aa8.44□□□□□ -1.06
CLIP1-219ENST00000620786 TMEM258P61165 79 aa8.44□□□□□ -1.06
CLIP1-219ENST00000620786 CRIP3Q6Q6R5 217 aa8.43□□□□□ -1.06
CLIP1-219ENST00000620786 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
CLIP1-219ENST00000620786 A0A0J9YXY3 114 aa8.43□□□□□ -1.06
CLIP1-219ENST00000620786 TRBV10-2A0A0K0K1G8 114 aa8.43□□□□□ -1.06
CLIP1-219ENST00000620786 IGKV4-1P06312 121 aa8.43□□□□□ -1.06
CLIP1-219ENST00000620786 IGHV4-30-4P0DP06 118 aa8.43□□□□□ -1.06
CLIP1-219ENST00000620786 IGLV1-40P01703 118 aa8.43□□□□□ -1.06
CLIP1-219ENST00000620786 CDPF1Q6NVV7 123 aa8.43□□□□□ -1.06
CLIP1-219ENST00000620786 SPANXCQ9NY87 97 aa8.43□□□□□ -1.06
CLIP1-219ENST00000620786 IGLV2-8P01709 118 aa8.42□□□□□ -1.06
CLIP1-219ENST00000620786 COA6Q5JTJ3 125 aaKnown RBP8.42□□□□□ -1.06
CLIP1-219ENST00000620786 Q8N976 141 aa8.42□□□□□ -1.06
CLIP1-219ENST00000620786 XAGE1AQ9HD64 81 aa8.42□□□□□ -1.06
CLIP1-219ENST00000620786 MUC22E2RYF6 1773 aaPredicted RBP8.42□□□□□ -1.06
CLIP1-219ENST00000620786 AVPP01185 164 aa8.42□□□□□ -1.06
CLIP1-219ENST00000620786 CDKN2A-AS1Q9UH64 79 aa8.42□□□□□ -1.06
CLIP1-219ENST00000620786 M0QY20 66 aa8.42□□□□□ -1.06
CLIP1-219ENST00000620786 LOC100131303A0A0U1RQF7 123 aa8.41□□□□□ -1.06
CLIP1-219ENST00000620786 CHD3Q12873 2000 aaKnown RBP8.41□□□□□ -1.06
CLIP1-219ENST00000620786 DSCAMO60469 2012 aa8.41□□□□□ -1.06
CLIP1-219ENST00000620786 IGLV4-3A0A075B6K6 122 aa8.41□□□□□ -1.06
CLIP1-219ENST00000620786 A0A1B0GXF2 115 aa8.41□□□□□ -1.06
CLIP1-219ENST00000620786 LELP1Q5T871 98 aa8.41□□□□□ -1.06
CLIP1-219ENST00000620786 NUPR2A6NF83 97 aa8.41□□□□□ -1.06
CLIP1-219ENST00000620786 TDRG1Q3Y452 100 aa8.4□□□□□ -1.06
CLIP1-219ENST00000620786 PDE6GP18545 87 aa8.4□□□□□ -1.06
CLIP1-219ENST00000620786 SEC61GP60059 68 aa8.4□□□□□ -1.06
CLIP1-219ENST00000620786 NACAE9PAV3 2078 aa8.4□□□□□ -1.07
CLIP1-219ENST00000620786 C9orf85Q96MD7 179 aa8.4□□□□□ -1.07
CLIP1-219ENST00000620786 NOTCH3Q9UM47 2321 aa8.39□□□□□ -1.07
CLIP1-219ENST00000620786 RBX1P62877 108 aa8.39□□□□□ -1.07
CLIP1-219ENST00000620786 RETNQ9HD89 108 aa8.39□□□□□ -1.07
CLIP1-219ENST00000620786 TMEM223A0PJW6 202 aa8.39□□□□□ -1.07
CLIP1-219ENST00000620786 UBE2D4Q9Y2X8 147 aa8.39□□□□□ -1.07
CLIP1-219ENST00000620786 PCDH15Q96QU1 1955 aa8.39□□□□□ -1.07
CLIP1-219ENST00000620786 DCANP1Q8TF63 244 aa8.39□□□□□ -1.07
CLIP1-219ENST00000620786 CREBBPQ92793 2442 aa8.39□□□□□ -1.07
CLIP1-219ENST00000620786 ZNF706Q9Y5V0 76 aaPredicted RBP8.39□□□□□ -1.07
CLIP1-219ENST00000620786 MED13LQ71F56 2210 aa8.39□□□□□ -1.07
CLIP1-219ENST00000620786 IGKV2-28A0A075B6P5 120 aa8.38□□□□□ -1.07
CLIP1-219ENST00000620786 IBA57-AS1B1ANH7 110 aa8.38□□□□□ -1.07
CLIP1-219ENST00000620786 IGKV2D-28P01615 120 aa8.38□□□□□ -1.07
CLIP1-219ENST00000620786 ZNF295-AS1Q8N0V1 137 aa8.38□□□□□ -1.07
CLIP1-219ENST00000620786 LOC107984640A0A0U1RRK4 108 aa8.38□□□□□ -1.07
CLIP1-219ENST00000620786 MLST8Q9BVC4 326 aa8.38□□□□□ -1.07
CLIP1-219ENST00000620786 SPANXB1Q9NS25 103 aaPredicted RBP8.38□□□□□ -1.07
CLIP1-219ENST00000620786 PRM2P04554 102 aa8.38□□□□□ -1.07
CLIP1-219ENST00000620786 CRIP1P50238 77 aa8.38□□□□□ -1.07
CLIP1-219ENST00000620786 TEN1Q86WV5 123 aa8.38□□□□□ -1.07
CLIP1-219ENST00000620786 LINC00526Q96FQ7 95 aa8.38□□□□□ -1.07
CLIP1-219ENST00000620786 PPDPFQ9H3Y8 114 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms