RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 LINC00643Q86TS7 51 aa11.83□□□□□ -0.52
SEMA3B-214ENST00000619119 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
SEMA3B-214ENST00000619119 CCDC168Q8NDH2 2452 aa11.82□□□□□ -0.52
SEMA3B-214ENST00000619119 F8W735 103 aaPredicted RBP11.82□□□□□ -0.52
SEMA3B-214ENST00000619119 F8WDY8 70 aa11.82□□□□□ -0.52
SEMA3B-214ENST00000619119 AVPP01185 164 aa11.82□□□□□ -0.52
SEMA3B-214ENST00000619119 CREBBPQ92793 2442 aa11.82□□□□□ -0.52
SEMA3B-214ENST00000619119 TRAV12-3A0A0B4J271 114 aa11.82□□□□□ -0.52
SEMA3B-214ENST00000619119 DEFB121Q5J5C9 76 aa11.82□□□□□ -0.52
SEMA3B-214ENST00000619119 C15orf32Q32M92 178 aa11.81□□□□□ -0.52
SEMA3B-214ENST00000619119 ZNF580Q9UK33 172 aa11.81□□□□□ -0.52
SEMA3B-214ENST00000619119 RHOHQ15669 191 aa11.81□□□□□ -0.52
SEMA3B-214ENST00000619119 RNF223E7ERA6 249 aa11.8□□□□□ -0.52
SEMA3B-214ENST00000619119 C5orf56Q8N8D9 126 aa11.8□□□□□ -0.52
SEMA3B-214ENST00000619119 AGPAT4-IT1Q9H0P7 198 aa11.8□□□□□ -0.52
SEMA3B-214ENST00000619119 IGHV3-66A0A0C4DH42 116 aa11.8□□□□□ -0.52
SEMA3B-214ENST00000619119 LINC00477Q96M19 166 aa11.8□□□□□ -0.52
SEMA3B-214ENST00000619119 H3BUX3 64 aa11.79□□□□□ -0.52
SEMA3B-214ENST00000619119 LST1O00453 97 aa11.79□□□□□ -0.52
SEMA3B-214ENST00000619119 IGHV3OR16-13A0A075B7E8 117 aa11.79□□□□□ -0.52
SEMA3B-214ENST00000619119 IGHV3-74A0A0B4J1X5 117 aa11.79□□□□□ -0.52
SEMA3B-214ENST00000619119 ATP5G1P05496 136 aa11.79□□□□□ -0.52
SEMA3B-214ENST00000619119 Q5XG85 94 aa11.79□□□□□ -0.52
SEMA3B-214ENST00000619119 B4DSR2 109 aa11.78□□□□□ -0.52
SEMA3B-214ENST00000619119 CTSGP08311 255 aa11.78□□□□□ -0.52
SEMA3B-214ENST00000619119 FAM19A4Q96LR4 140 aa11.78□□□□□ -0.52
SEMA3B-214ENST00000619119 OPRPNQ99935 248 aaPredicted RBP11.78□□□□□ -0.52
SEMA3B-214ENST00000619119 TRAV13-1A0A0B4J241 112 aa11.78□□□□□ -0.52
SEMA3B-214ENST00000619119 IGIPA6NJ69 53 aa11.78□□□□□ -0.52
SEMA3B-214ENST00000619119 ACYP1P07311 99 aa11.78□□□□□ -0.52
SEMA3B-214ENST00000619119 CLEC19AQ6UXS0 136 aa11.78□□□□□ -0.52
SEMA3B-214ENST00000619119 I3L3M4 83 aa11.77□□□□□ -0.52
SEMA3B-214ENST00000619119 S100A4P26447 101 aaKnown RBP11.77□□□□□ -0.52
SEMA3B-214ENST00000619119 FAM110DQ8TAY7 271 aaPredicted RBP11.77□□□□□ -0.52
SEMA3B-214ENST00000619119 DPH3P1Q9H4G8 78 aa11.77□□□□□ -0.52
SEMA3B-214ENST00000619119 MOB4Q9Y3A3 225 aa11.77□□□□□ -0.52
SEMA3B-214ENST00000619119 LEPROTO15243 131 aa11.77□□□□□ -0.53
SEMA3B-214ENST00000619119 MRAPQ8TCY5 172 aa11.77□□□□□ -0.53
SEMA3B-214ENST00000619119 TENM4Q6N022 2769 aa11.76□□□□□ -0.53
SEMA3B-214ENST00000619119 A0A0J9YXY3 114 aa11.76□□□□□ -0.53
SEMA3B-214ENST00000619119 ATOX1O00244 68 aa11.76□□□□□ -0.53
SEMA3B-214ENST00000619119 TMEM258P61165 79 aa11.76□□□□□ -0.53
SEMA3B-214ENST00000619119 APCP25054 2843 aa11.76□□□□□ -0.53
SEMA3B-214ENST00000619119 HIST2H2BCQ6DN03 193 aa11.76□□□□□ -0.53
SEMA3B-214ENST00000619119 NACAE9PAV3 2078 aa11.76□□□□□ -0.53
SEMA3B-214ENST00000619119 TEX15Q9BXT5 2789 aa11.76□□□□□ -0.53
SEMA3B-214ENST00000619119 IGHV3-49A0A0A0MS15 119 aa11.75□□□□□ -0.53
SEMA3B-214ENST00000619119 BLCAPP62952 87 aa11.75□□□□□ -0.53
SEMA3B-214ENST00000619119 JPT2Q9H910 190 aa11.75□□□□□ -0.53
SEMA3B-214ENST00000619119 ZNF469Q96JG9 3925 aaPredicted RBP11.75□□□□□ -0.53
SEMA3B-214ENST00000619119 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
SEMA3B-214ENST00000619119 SONP18583 2426 aaKnown RBP11.75□□□□□ -0.53
SEMA3B-214ENST00000619119 ZNF876PQ49A33 203 aa11.75□□□□□ -0.53
SEMA3B-214ENST00000619119 C1orf43Q9BWL3 253 aa11.75□□□□□ -0.53
SEMA3B-214ENST00000619119 PHLDA3Q9Y5J5 127 aa11.75□□□□□ -0.53
SEMA3B-214ENST00000619119 TRBV7-1A0A0A6YYK4 115 aa11.74□□□□□ -0.53
SEMA3B-214ENST00000619119 C5orf38Q86SI9 138 aa11.74□□□□□ -0.53
SEMA3B-214ENST00000619119 PYGO1Q9Y3Y4 419 aa11.74□□□□□ -0.53
SEMA3B-214ENST00000619119 J3QLI3 93 aa11.73□□□□□ -0.53
SEMA3B-214ENST00000619119 SEC61GP60059 68 aa11.73□□□□□ -0.53
SEMA3B-214ENST00000619119 CCDC140Q96MF4 163 aa11.73□□□□□ -0.53
SEMA3B-214ENST00000619119 SPANXDQ9BXN6 97 aa11.73□□□□□ -0.53
SEMA3B-214ENST00000619119 PRRC2AP48634 2157 aaKnown RBP11.73□□□□□ -0.53
SEMA3B-214ENST00000619119 PRR9Q5T870 116 aa11.73□□□□□ -0.53
SEMA3B-214ENST00000619119 SPANXCQ9NY87 97 aa11.73□□□□□ -0.53
SEMA3B-214ENST00000619119 MXRA5Q9NR99 2828 aa11.73□□□□□ -0.53
SEMA3B-214ENST00000619119 SDIM1Q6ZPB5 146 aa11.73□□□□□ -0.53
SEMA3B-214ENST00000619119 PEMTQ9UBM1 199 aa11.73□□□□□ -0.53
SEMA3B-214ENST00000619119 HELZ2Q9BYK8 2649 aaKnown RBP11.72□□□□□ -0.53
SEMA3B-214ENST00000619119 IGF1P05019 195 aa11.72□□□□□ -0.53
SEMA3B-214ENST00000619119 DSCR9P59020 149 aa11.72□□□□□ -0.53
SEMA3B-214ENST00000619119 LINC01356Q8N9X3 169 aa11.72□□□□□ -0.53
SEMA3B-214ENST00000619119 ADAMTSL4-AS1Q5T5F5 129 aa11.71□□□□□ -0.53
SEMA3B-214ENST00000619119 TMEM141Q96I45 108 aa11.71□□□□□ -0.53
SEMA3B-214ENST00000619119 TIMM21Q9BVV7 248 aa11.71□□□□□ -0.53
SEMA3B-214ENST00000619119 IGHV3-11P01762 117 aa11.71□□□□□ -0.53
SEMA3B-214ENST00000619119 GPHB5Q86YW7 130 aa11.71□□□□□ -0.53
SEMA3B-214ENST00000619119 DCANP1Q8TF63 244 aa11.71□□□□□ -0.53
SEMA3B-214ENST00000619119 PKIGQ9Y2B9 76 aa11.71□□□□□ -0.53
SEMA3B-214ENST00000619119 CXCL5P42830 114 aa11.71□□□□□ -0.54
SEMA3B-214ENST00000619119 A0A0J9YXV3 536 aa11.7□□□□□ -0.54
SEMA3B-214ENST00000619119 IGHV4-59P01825 116 aa11.7□□□□□ -0.54
SEMA3B-214ENST00000619119 DAZ2Q13117 558 aaKnown RBP11.7□□□□□ -0.54
SEMA3B-214ENST00000619119 DEFB112Q30KQ8 113 aa11.7□□□□□ -0.54
SEMA3B-214ENST00000619119 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.7□□□□□ -0.54
SEMA3B-214ENST00000619119 DAZ4Q86SG3 579 aaKnown RBP11.7□□□□□ -0.54
SEMA3B-214ENST00000619119 DAZ1Q9NQZ3 744 aaKnown RBP11.7□□□□□ -0.54
SEMA3B-214ENST00000619119 DAZ3Q9NR90 486 aaKnown RBP11.7□□□□□ -0.54
SEMA3B-214ENST00000619119 TIMM17AQ99595 171 aa11.69□□□□□ -0.54
SEMA3B-214ENST00000619119 A0A096LNT2 108 aa11.69□□□□□ -0.54
SEMA3B-214ENST00000619119 IGKV3D-7A0A0C4DH55 119 aa11.69□□□□□ -0.54
SEMA3B-214ENST00000619119 A6NDX4 124 aa11.69□□□□□ -0.54
SEMA3B-214ENST00000619119 TRBV12-3P01733 135 aa11.69□□□□□ -0.54
SEMA3B-214ENST00000619119 RPL18AQ02543 176 aaKnown RBP11.69□□□□□ -0.54
SEMA3B-214ENST00000619119 F5H697 171 aa11.68□□□□□ -0.54
SEMA3B-214ENST00000619119 DAND5Q8N907 189 aa11.68□□□□□ -0.54
SEMA3B-214ENST00000619119 LITAFQ99732 161 aa11.68□□□□□ -0.54
SEMA3B-214ENST00000619119 MYO9AB2RTY4 2548 aa11.68□□□□□ -0.54
SEMA3B-214ENST00000619119 A0A087WVE0 104 aa11.68□□□□□ -0.54
SEMA3B-214ENST00000619119 SDHAF1A6NFY7 115 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms