RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 UPK3BQ9BT76 320 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 A0A1B0GXF2 115 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 CTSGP08311 255 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 TRAV23DV6A0A075B6W5 121 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 B4DSR2 109 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 WT1-ASQ06250 92 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 Q9H8V8 135 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 EML5Q05BV3 1969 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 H3BPC8 53 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 GRNP28799 593 aaKnown RBP2.35□□□□□ -2.03
NEB-220ENST00000618972 KLK9Q9UKQ9 250 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 IGKV1D-37A0A075B6S9 117 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 TRBV6-5A0A0K0K1A5 114 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 FAM236DA0A1B0GTK5 79 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 FAM236CP0DP71 79 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 PFN2P35080 140 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 FAM19A3Q7Z5A8 133 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 AJUBAQ96IF1 538 aa2.35□□□□□ -2.03
NEB-220ENST00000618972 ALPK3Q96L96 1907 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 NDPQ00604 133 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 EBI3Q14213 229 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 MPLKIPQ8TAP9 179 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 UBE2D3P61077 147 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 UBE2D2P62837 147 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 KIR2DL5BQ8NHK3 375 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 IGHV3-30P01768 117 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 IGHV3-30-5P0DP03 117 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 TP53AIP1Q9HCN2 124 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 A0A087WZ39 114 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 CNFNQ9BYD5 112 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 NHLRC4P0CG21 123 aaPredicted RBP2.34□□□□□ -2.03
NEB-220ENST00000618972 NFE4Q86UQ8 179 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 BRWD3Q6RI45 1802 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 TRGV1A0A0A0MS02 117 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 CCDC179H3BU77 68 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 RETNLBQ9BQ08 111 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 C11orf21Q9P2W6 132 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 CCDC168Q8NDH2 2452 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 IGHV3-30-3P0DP02 117 aa2.34□□□□□ -2.03
NEB-220ENST00000618972 COX8CQ7Z4L0 72 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 Q8TAT8 98 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 TMEM223A0PJW6 202 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 J3QLI3 93 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 MIAQ16674 131 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 DEFB123Q8N688 67 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 Q9UF83 564 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 IGKV2D-26A0A0A0MRZ7 120 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 SMAD5-AS1Q9Y6J3 95 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 IGKV3D-7A0A0C4DH55 119 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 XCL1P47992 114 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 HRCT1Q6UXD1 115 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 LINC00467Q9BRT7 94 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 XCL2Q9UBD3 114 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 COL11A2P13942 1736 aaPredicted RBP2.34□□□□□ -2.04
NEB-220ENST00000618972 NCOR2Q9Y618 2525 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 OBSL1O75147 1896 aa2.34□□□□□ -2.04
NEB-220ENST00000618972 IGHV3OR16-12A0A075B7B8 117 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 PLA2G2AP14555 144 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 VMO1Q7Z5L0 202 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 DHRS4-AS1Q9P1J3 65 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 IGKV1-17P01599 117 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 LINC00308Q8TCZ7 52 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 CDSNQ15517 529 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 C9orf85Q96MD7 179 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 ZNF22P17026 224 aaPredicted RBP2.33□□□□□ -2.04
NEB-220ENST00000618972 LINC01546A6NGU7 62 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 IGLV2-23P01705 113 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 ACYP2P14621 99 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 RPL37AP8A6NKH3 93 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 CFHR3Q02985 330 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 C4orf3Q8WVX3 66 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.33□□□□□ -2.04
NEB-220ENST00000618972 Q6ZS46 218 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 ZFHX2Q9C0A1 2572 aaPredicted RBP2.33□□□□□ -2.04
NEB-220ENST00000618972 C8orf87E5RJ46 101 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 LINC01561Q8N1V8 128 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 NOTCH2NLQ7Z3S9 236 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 ZFP36P26651 326 aaKnown RBP2.33□□□□□ -2.04
NEB-220ENST00000618972 APOC4P55056 127 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 SCXQ7RTU7 201 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 NSUN5P1Q3KNT7 163 aa2.33□□□□□ -2.04
NEB-220ENST00000618972 G3V318 75 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 Q6JHZ5 121 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 CASC2Q6XLA1 102 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 IGLV2-11P01706 119 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 IGHV3-64A0A075B6Q5 118 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 MDS2Q8NDY4 140 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 IGLV3-9A0A075B6K5 115 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 H3BUX3 64 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 IGHV3-73A0A0B4J1V6 119 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 OVOL3O00110 214 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 ENHOQ6UWT2 76 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 FAM30AQ9NZY2 134 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 SHANK3Q9BYB0 1731 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 NCR3O14931 201 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 C4orf26Q17RF5 130 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 IGFL3Q6UXB1 125 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 A0A087WWL8 130 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 WDR90Q96KV7 1748 aa2.32□□□□□ -2.04
NEB-220ENST00000618972 IGKV3D-20A0A0C4DH25 116 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms