RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 TRIAP1O43715 76 aa14.87□□□□□ -0.03
NEK3-208ENST00000618534 RBMY1DP0C7P1 496 aaKnown RBP14.87□□□□□ -0.03
NEK3-208ENST00000618534 NDUFA12Q9UI09 145 aa14.87□□□□□ -0.03
NEK3-208ENST00000618534 DUX3Q96PT4 197 aa14.87□□□□□ -0.03
NEK3-208ENST00000618534 NTN5Q8WTR8 489 aaPredicted RBP14.86□□□□□ -0.03
NEK3-208ENST00000618534 CHCHD7Q9BUK0 85 aa14.86□□□□□ -0.03
NEK3-208ENST00000618534 CFAP46Q8IYW2 2715 aa14.86□□□□□ -0.03
NEK3-208ENST00000618534 TMEM262E9PQX1 116 aa14.86□□□□□ -0.03
NEK3-208ENST00000618534 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.85□□□□□ -0.03
NEK3-208ENST00000618534 TRBV30A0A0K0K1B3 111 aa14.85□□□□□ -0.03
NEK3-208ENST00000618534 IGKV2-29A2NJV5 120 aaPredicted RBP14.85□□□□□ -0.03
NEK3-208ENST00000618534 UBE2E2Q96LR5 201 aa14.85□□□□□ -0.03
NEK3-208ENST00000618534 FLNCQ14315 2725 aa14.85□□□□□ -0.03
NEK3-208ENST00000618534 CSMD2Q7Z408 3487 aa14.85□□□□□ -0.03
NEK3-208ENST00000618534 SLURP1P55000 103 aa14.85□□□□□ -0.03
NEK3-208ENST00000618534 DEFB136Q30KP8 78 aa14.85□□□□□ -0.03
NEK3-208ENST00000618534 LINC01356Q8N9X3 169 aa14.85□□□□□ -0.03
NEK3-208ENST00000618534 MAPK1IP1LQ8NDC0 245 aa14.85□□□□□ -0.03
NEK3-208ENST00000618534 VSIG2Q96IQ7 327 aa14.85□□□□□ -0.03
NEK3-208ENST00000618534 UBE2D4Q9Y2X8 147 aa14.85□□□□□ -0.03
NEK3-208ENST00000618534 TRAV26-1A0A087WT03 109 aa14.84□□□□□ -0.03
NEK3-208ENST00000618534 H3BMM0 161 aa14.84□□□□□ -0.03
NEK3-208ENST00000618534 NPC2P61916 151 aa14.84□□□□□ -0.03
NEK3-208ENST00000618534 C18orf65Q6ZTR6 163 aa14.84□□□□□ -0.03
NEK3-208ENST00000618534 SPANXDQ9BXN6 97 aa14.84□□□□□ -0.03
NEK3-208ENST00000618534 ZNF702PQ9H963 129 aa14.84□□□□□ -0.03
NEK3-208ENST00000618534 SPANXCQ9NY87 97 aa14.84□□□□□ -0.03
NEK3-208ENST00000618534 TINCRA0A1B0GVN0 87 aa14.84□□□□□ -0.03
NEK3-208ENST00000618534 VPREB3Q9UKI3 123 aa14.84□□□□□ -0.03
NEK3-208ENST00000618534 DOPEY1Q5JWR5 2465 aa14.83□□□□□ -0.04
NEK3-208ENST00000618534 PKD1L2Q7Z442 2459 aa14.83□□□□□ -0.04
NEK3-208ENST00000618534 Q5PR19 223 aa14.83□□□□□ -0.04
NEK3-208ENST00000618534 Q6ZSV7 163 aa14.83□□□□□ -0.04
NEK3-208ENST00000618534 SPANXA1Q9NS26 97 aa14.83□□□□□ -0.04
NEK3-208ENST00000618534 ZANQ9Y493 2812 aa14.82□□□□□ -0.04
NEK3-208ENST00000618534 A8MTW9 85 aa14.82□□□□□ -0.04
NEK3-208ENST00000618534 MIAQ16674 131 aa14.82□□□□□ -0.04
NEK3-208ENST00000618534 LINC00467Q9BRT7 94 aa14.82□□□□□ -0.04
NEK3-208ENST00000618534 USP9XQ93008 2570 aaPredicted RBP14.82□□□□□ -0.04
NEK3-208ENST00000618534 UTP20O75691 2785 aaKnown RBP14.82□□□□□ -0.04
NEK3-208ENST00000618534 IGHV3-38A0A0C4DH36 116 aa14.82□□□□□ -0.04
NEK3-208ENST00000618534 ZNF415Q09FC8 603 aa14.82□□□□□ -0.04
NEK3-208ENST00000618534 ICOSQ9Y6W8 199 aa14.82□□□□□ -0.04
NEK3-208ENST00000618534 TRBV10-2A0A0K0K1G8 114 aa14.81□□□□□ -0.04
NEK3-208ENST00000618534 DSCR9P59020 149 aa14.81□□□□□ -0.04
NEK3-208ENST00000618534 USP9YO00507 2555 aaPredicted RBP14.8□□□□□ -0.04
NEK3-208ENST00000618534 TEX49A0A1B0GTD5 131 aa14.8□□□□□ -0.04
NEK3-208ENST00000618534 CLUHP3Q96NS8 147 aa14.8□□□□□ -0.04
NEK3-208ENST00000618534 A0A096LNT2 108 aa14.78□□□□□ -0.04
NEK3-208ENST00000618534 ZFAND6Q6FIF0 208 aa14.78□□□□□ -0.04
NEK3-208ENST00000618534 TMEM61Q8N0U2 210 aa14.78□□□□□ -0.04
NEK3-208ENST00000618534 LINC01600Q96MT4 127 aa14.78□□□□□ -0.04
NEK3-208ENST00000618534 CITED1Q99966 193 aa14.78□□□□□ -0.04
NEK3-208ENST00000618534 PIEZO1Q92508 2521 aa14.77□□□□□ -0.04
NEK3-208ENST00000618534 PIK3CD-AS1Q5SR53 167 aa14.77□□□□□ -0.04
NEK3-208ENST00000618534 RNF183Q96D59 192 aa14.77□□□□□ -0.04
NEK3-208ENST00000618534 J3QLI3 93 aa14.77□□□□□ -0.05
NEK3-208ENST00000618534 RPL13AP40429 203 aaKnown RBP14.77□□□□□ -0.05
NEK3-208ENST00000618534 C11orf72Q8NBR9 251 aa14.77□□□□□ -0.05
NEK3-208ENST00000618534 Q6YL49 198 aa14.76□□□□□ -0.05
NEK3-208ENST00000618534 LINC01587Q99440 93 aa14.76□□□□□ -0.05
NEK3-208ENST00000618534 CDKN2A-AS1Q9UH64 79 aa14.76□□□□□ -0.05
NEK3-208ENST00000618534 IGHV3-53P01767 116 aa14.76□□□□□ -0.05
NEK3-208ENST00000618534 TEX29Q8N6K0 151 aa14.76□□□□□ -0.05
NEK3-208ENST00000618534 DAND5Q8N907 189 aa14.76□□□□□ -0.05
NEK3-208ENST00000618534 CLEC2BQ92478 149 aa14.76□□□□□ -0.05
NEK3-208ENST00000618534 H7C423 109 aa14.75□□□□□ -0.05
NEK3-208ENST00000618534 MXRA5Q9NR99 2828 aa14.75□□□□□ -0.05
NEK3-208ENST00000618534 C2orf82Q6UX34 121 aa14.75□□□□□ -0.05
NEK3-208ENST00000618534 UBE2WQ96B02 151 aa14.75□□□□□ -0.05
NEK3-208ENST00000618534 MAP6D1Q9H9H5 199 aa14.75□□□□□ -0.05
NEK3-208ENST00000618534 ANAPC13Q9BS18 74 aa14.74□□□□□ -0.05
NEK3-208ENST00000618534 ANKRD17O75179 2603 aaKnown RBP14.74□□□□□ -0.05
NEK3-208ENST00000618534 CRLF1O75462 422 aa14.74□□□□□ -0.05
NEK3-208ENST00000618534 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.74□□□□□ -0.05
NEK3-208ENST00000618534 YAE1D1Q9NRH1 226 aa14.74□□□□□ -0.05
NEK3-208ENST00000618534 COX6CP09669 75 aa14.73□□□□□ -0.05
NEK3-208ENST00000618534 DNAJC30Q96LL9 226 aa14.73□□□□□ -0.05
NEK3-208ENST00000618534 TRAV8-4A0A0B4J246 113 aa14.73□□□□□ -0.05
NEK3-208ENST00000618534 TRAV4A0A0B4J268 109 aa14.73□□□□□ -0.05
NEK3-208ENST00000618534 POLQO75417 2590 aa14.72□□□□□ -0.05
NEK3-208ENST00000618534 TIMM17BO60830 172 aa14.72□□□□□ -0.05
NEK3-208ENST00000618534 TMEM101Q96IK0 257 aa14.72□□□□□ -0.05
NEK3-208ENST00000618534 SNCGO76070 127 aa14.72□□□□□ -0.05
NEK3-208ENST00000618534 FSHBP01225 129 aa14.72□□□□□ -0.05
NEK3-208ENST00000618534 BEAN1Q3B7T3 259 aa14.72□□□□□ -0.05
NEK3-208ENST00000618534 NDUFA1O15239 70 aa14.71□□□□□ -0.05
NEK3-208ENST00000618534 IGLV5-45A0A087WSX0 123 aa14.71□□□□□ -0.06
NEK3-208ENST00000618534 RS1O15537 224 aa14.71□□□□□ -0.06
NEK3-208ENST00000618534 COX6A2Q02221 97 aa14.71□□□□□ -0.06
NEK3-208ENST00000618534 HIST2H2BDQ6DRA6 164 aa14.71□□□□□ -0.06
NEK3-208ENST00000618534 INSP01308 110 aa14.7□□□□□ -0.06
NEK3-208ENST00000618534 TIRAPP58753 221 aa14.7□□□□□ -0.06
NEK3-208ENST00000618534 PEMTQ9UBM1 199 aa14.7□□□□□ -0.06
NEK3-208ENST00000618534 LST1O00453 97 aa14.7□□□□□ -0.06
NEK3-208ENST00000618534 IFITM1P13164 125 aa14.7□□□□□ -0.06
NEK3-208ENST00000618534 DGAT2L7PQ6IED9 249 aa14.7□□□□□ -0.06
NEK3-208ENST00000618534 DYNLRB2Q8TF09 96 aa14.7□□□□□ -0.06
NEK3-208ENST00000618534 IGHV3OR16-12A0A075B7B8 117 aa14.69□□□□□ -0.06
NEK3-208ENST00000618534 H3BT86 120 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms