RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 LINC01620Q4KN68 170 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 CHCHD7Q9BUK0 85 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 ZNF702PQ9H963 129 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 J3QLI3 93 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 TRIAP1O43715 76 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 PRM2P04554 102 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 ZNF415Q09FC8 603 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 NRGNQ92686 78 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 VSIG2Q96IQ7 327 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 Q9UF83 564 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 UBE2D4Q9Y2X8 147 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 CELSR2Q9HCU4 2923 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 SPG11Q96JI7 2443 aa12.74□□□□□ -0.37
DDX1-207ENST00000617198 RBMY1BA6NDE4 496 aaKnown RBP12.73□□□□□ -0.37
DDX1-207ENST00000617198 RBMY1EA6NEQ0 496 aaKnown RBP12.73□□□□□ -0.37
DDX1-207ENST00000617198 RBMY1DP0C7P1 496 aaKnown RBP12.73□□□□□ -0.37
DDX1-207ENST00000617198 ADAMTSL4-AS1Q5T5F5 129 aa12.73□□□□□ -0.37
DDX1-207ENST00000617198 PRRC2AP48634 2157 aaKnown RBP12.73□□□□□ -0.37
DDX1-207ENST00000617198 Q6ZSN1 163 aa12.73□□□□□ -0.37
DDX1-207ENST00000617198 BEX4Q9NWD9 120 aaPredicted RBP12.73□□□□□ -0.37
DDX1-207ENST00000617198 SLURP1P55000 103 aa12.72□□□□□ -0.37
DDX1-207ENST00000617198 LINC01600Q96MT4 127 aa12.72□□□□□ -0.37
DDX1-207ENST00000617198 MAP1AP78559 2803 aaPredicted RBP12.72□□□□□ -0.37
DDX1-207ENST00000617198 NACAE9PAV3 2078 aa12.72□□□□□ -0.37
DDX1-207ENST00000617198 MIAQ16674 131 aa12.72□□□□□ -0.37
DDX1-207ENST00000617198 NTN5Q8WTR8 489 aaPredicted RBP12.72□□□□□ -0.37
DDX1-207ENST00000617198 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.71□□□□□ -0.37
DDX1-207ENST00000617198 IGKV2-29A2NJV5 120 aaPredicted RBP12.71□□□□□ -0.37
DDX1-207ENST00000617198 TRBV10-2A0A0K0K1G8 114 aa12.71□□□□□ -0.38
DDX1-207ENST00000617198 Q6YL49 198 aa12.71□□□□□ -0.38
DDX1-207ENST00000617198 A0A096LNT2 108 aa12.7□□□□□ -0.38
DDX1-207ENST00000617198 A8MZ25 164 aa12.7□□□□□ -0.38
DDX1-207ENST00000617198 DEFB136Q30KP8 78 aa12.7□□□□□ -0.38
DDX1-207ENST00000617198 LINC00467Q9BRT7 94 aa12.7□□□□□ -0.38
DDX1-207ENST00000617198 ICOSQ9Y6W8 199 aa12.7□□□□□ -0.38
DDX1-207ENST00000617198 ZFAND6Q6FIF0 208 aa12.69□□□□□ -0.38
DDX1-207ENST00000617198 C18orf65Q6ZTR6 163 aa12.69□□□□□ -0.38
DDX1-207ENST00000617198 MAPK1IP1LQ8NDC0 245 aa12.69□□□□□ -0.38
DDX1-207ENST00000617198 DNAJC30Q96LL9 226 aa12.69□□□□□ -0.38
DDX1-207ENST00000617198 IGHV3-53P01767 116 aa12.68□□□□□ -0.38
DDX1-207ENST00000617198 RPL13AP40429 203 aaKnown RBP12.68□□□□□ -0.38
DDX1-207ENST00000617198 TMEM61Q8N0U2 210 aa12.68□□□□□ -0.38
DDX1-207ENST00000617198 C11orf72Q8NBR9 251 aa12.68□□□□□ -0.38
DDX1-207ENST00000617198 RNF183Q96D59 192 aa12.68□□□□□ -0.38
DDX1-207ENST00000617198 TRAV26-1A0A087WT03 109 aa12.67□□□□□ -0.38
DDX1-207ENST00000617198 IGHV3-38A0A0C4DH36 116 aa12.67□□□□□ -0.38
DDX1-207ENST00000617198 LINC01587Q99440 93 aa12.67□□□□□ -0.38
DDX1-207ENST00000617198 YAE1D1Q9NRH1 226 aa12.67□□□□□ -0.38
DDX1-207ENST00000617198 TIMM17BO60830 172 aa12.67□□□□□ -0.38
DDX1-207ENST00000617198 COX6CP09669 75 aa12.67□□□□□ -0.38
DDX1-207ENST00000617198 NPC2P61916 151 aa12.67□□□□□ -0.38
DDX1-207ENST00000617198 CITED1Q99966 193 aa12.66□□□□□ -0.38
DDX1-207ENST00000617198 PEMTQ9UBM1 199 aa12.66□□□□□ -0.38
DDX1-207ENST00000617198 TEX49A0A1B0GTD5 131 aa12.65□□□□□ -0.38
DDX1-207ENST00000617198 FSHBP01225 129 aa12.65□□□□□ -0.38
DDX1-207ENST00000617198 BEAN1Q3B7T3 259 aa12.65□□□□□ -0.38
DDX1-207ENST00000617198 TEX29Q8N6K0 151 aa12.65□□□□□ -0.38
DDX1-207ENST00000617198 MAP6D1Q9H9H5 199 aa12.65□□□□□ -0.38
DDX1-207ENST00000617198 IFITM1P13164 125 aa12.65□□□□□ -0.38
DDX1-207ENST00000617198 CDKN2A-AS1Q9UH64 79 aa12.65□□□□□ -0.38
DDX1-207ENST00000617198 TIRAPP58753 221 aa12.64□□□□□ -0.39
DDX1-207ENST00000617198 C2orf82Q6UX34 121 aa12.64□□□□□ -0.39
DDX1-207ENST00000617198 Q6ZSV7 163 aa12.64□□□□□ -0.39
DDX1-207ENST00000617198 UBE2WQ96B02 151 aa12.64□□□□□ -0.39
DDX1-207ENST00000617198 IGLV5-45A0A087WSX0 123 aa12.64□□□□□ -0.39
DDX1-207ENST00000617198 RS1O15537 224 aa12.64□□□□□ -0.39
DDX1-207ENST00000617198 H7C423 109 aa12.63□□□□□ -0.39
DDX1-207ENST00000617198 NDUFA1O15239 70 aa12.63□□□□□ -0.39
DDX1-207ENST00000617198 INSP01308 110 aa12.63□□□□□ -0.39
DDX1-207ENST00000617198 DOPEY1Q5JWR5 2465 aa12.62□□□□□ -0.39
DDX1-207ENST00000617198 TRAV8-4A0A0B4J246 113 aa12.62□□□□□ -0.39
DDX1-207ENST00000617198 H3BT86 120 aa12.62□□□□□ -0.39
DDX1-207ENST00000617198 SNCGO76070 127 aa12.62□□□□□ -0.39
DDX1-207ENST00000617198 DYNLRB2Q8TF09 96 aa12.62□□□□□ -0.39
DDX1-207ENST00000617198 TMEM101Q96IK0 257 aa12.62□□□□□ -0.39
DDX1-207ENST00000617198 DGAT2L7PQ6IED9 249 aa12.62□□□□□ -0.39
DDX1-207ENST00000617198 ANAPC13Q9BS18 74 aa12.62□□□□□ -0.39
DDX1-207ENST00000617198 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.61□□□□□ -0.39
DDX1-207ENST00000617198 CLEC2BQ92478 149 aa12.61□□□□□ -0.39
DDX1-207ENST00000617198 LST1O00453 97 aa12.6□□□□□ -0.39
DDX1-207ENST00000617198 DAND5Q8N907 189 aa12.6□□□□□ -0.39
DDX1-207ENST00000617198 C4orf3Q8WVX3 66 aa12.6□□□□□ -0.39
DDX1-207ENST00000617198 CREBBPQ92793 2442 aa12.6□□□□□ -0.39
DDX1-207ENST00000617198 CIRBPQ14011 172 aaKnown RBP12.6□□□□□ -0.39
DDX1-207ENST00000617198 Q8N2B8 174 aa12.6□□□□□ -0.39
DDX1-207ENST00000617198 IGHV4-31P0DP07 118 aa12.59□□□□□ -0.39
DDX1-207ENST00000617198 COX6A2Q02221 97 aa12.59□□□□□ -0.39
DDX1-207ENST00000617198 GAGE2BQ13066 116 aa12.59□□□□□ -0.39
DDX1-207ENST00000617198 GAGE2EQ4V326 116 aa12.59□□□□□ -0.39
DDX1-207ENST00000617198 GAGE2DQ9UEU5 116 aa12.59□□□□□ -0.39
DDX1-207ENST00000617198 IGHV3OR16-12A0A075B7B8 117 aa12.59□□□□□ -0.39
DDX1-207ENST00000617198 DEFB114Q30KQ6 69 aa12.59□□□□□ -0.39
DDX1-207ENST00000617198 CLUHP3Q96NS8 147 aa12.59□□□□□ -0.39
DDX1-207ENST00000617198 CSMD2Q7Z408 3487 aa12.59□□□□□ -0.39
DDX1-207ENST00000617198 PKD1L2Q7Z442 2459 aa12.58□□□□□ -0.4
DDX1-207ENST00000617198 TRAV4A0A0B4J268 109 aa12.58□□□□□ -0.4
DDX1-207ENST00000617198 CRLF1O75462 422 aa12.58□□□□□ -0.4
DDX1-207ENST00000617198 HERVK_113P63121 156 aa12.58□□□□□ -0.4
DDX1-207ENST00000617198 KHDC1LQ5JSQ8 128 aa12.58□□□□□ -0.4
DDX1-207ENST00000617198 CFAP46Q8IYW2 2715 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms