RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PLEKHB2Q96CS7 222 aa9.8□□□□□ -0.84
FOXN3-219ENST00000615335 ZFAND3Q9H8U3 227 aa9.8□□□□□ -0.84
FOXN3-219ENST00000615335 MSRB1Q9NZV6 116 aa9.8□□□□□ -0.84
FOXN3-219ENST00000615335 PRAC2D3DTV9 90 aa9.8□□□□□ -0.84
FOXN3-219ENST00000615335 TRPT1Q86TN4 253 aaKnown RBP9.8□□□□□ -0.84
FOXN3-219ENST00000615335 EEF1AKMT3Q96AZ1 226 aa9.8□□□□□ -0.84
FOXN3-219ENST00000615335 C16orf95Q9H693 158 aa9.8□□□□□ -0.84
FOXN3-219ENST00000615335 FAM236AA0A1B0GUQ0 79 aa9.79□□□□□ -0.84
FOXN3-219ENST00000615335 FAM236BA0A1B0GV22 79 aa9.79□□□□□ -0.84
FOXN3-219ENST00000615335 RBAKDNA6NC62 111 aa9.79□□□□□ -0.84
FOXN3-219ENST00000615335 BUB3O43684 328 aa9.79□□□□□ -0.84
FOXN3-219ENST00000615335 IGHV3-30P01768 117 aa9.79□□□□□ -0.84
FOXN3-219ENST00000615335 IGHV3-30-5P0DP03 117 aa9.79□□□□□ -0.84
FOXN3-219ENST00000615335 A0A0J9YY99 117 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 F5H768 121 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 IGHV3-11P01762 117 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 TMEM170BQ5T4T1 132 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 RNF182Q8N6D2 247 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 POM121L12Q8N7R1 296 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 USMG5Q96IX5 58 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 SLC50A1Q9BRV3 221 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 TRBV7-1A0A0A6YYK4 115 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 TMEM89A2RUT3 159 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 ELANEP08246 267 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 HERVK_113P61574 105 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 PMVKQ15126 192 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 NEXN-AS1Q8NBZ9 246 aa9.78□□□□□ -0.84
FOXN3-219ENST00000615335 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.84
FOXN3-219ENST00000615335 DEFB121Q5J5C9 76 aa9.77□□□□□ -0.84
FOXN3-219ENST00000615335 CLEC19AQ6UXS0 136 aa9.77□□□□□ -0.84
FOXN3-219ENST00000615335 H3BT86 120 aa9.77□□□□□ -0.85
FOXN3-219ENST00000615335 ACYP1P07311 99 aa9.77□□□□□ -0.85
FOXN3-219ENST00000615335 CCDC140Q96MF4 163 aa9.77□□□□□ -0.85
FOXN3-219ENST00000615335 EDA2RQ9HAV5 297 aa9.77□□□□□ -0.85
FOXN3-219ENST00000615335 TRGV11A0A075B6L2 103 aa9.76□□□□□ -0.85
FOXN3-219ENST00000615335 A0A0B4J2C4 111 aa9.76□□□□□ -0.85
FOXN3-219ENST00000615335 CLPSL1A2RUU4 121 aa9.76□□□□□ -0.85
FOXN3-219ENST00000615335 GAS8-AS1O95177 125 aa9.76□□□□□ -0.85
FOXN3-219ENST00000615335 IGHV3-33P01772 117 aa9.76□□□□□ -0.85
FOXN3-219ENST00000615335 ORMDL2Q53FV1 153 aa9.76□□□□□ -0.85
FOXN3-219ENST00000615335 SLC25A29Q8N8R3 303 aa9.76□□□□□ -0.85
FOXN3-219ENST00000615335 PAPPA-AS1Q5QFB9 102 aa9.76□□□□□ -0.85
FOXN3-219ENST00000615335 GAGE2AQ6NT46 116 aa9.76□□□□□ -0.85
FOXN3-219ENST00000615335 SCGB3A1Q96QR1 104 aa9.76□□□□□ -0.85
FOXN3-219ENST00000615335 ATRQ13535 2644 aa9.76□□□□□ -0.85
FOXN3-219ENST00000615335 IGHV3OR16-13A0A075B7E8 117 aa9.75□□□□□ -0.85
FOXN3-219ENST00000615335 IGHV3-74A0A0B4J1X5 117 aa9.75□□□□□ -0.85
FOXN3-219ENST00000615335 CRYGAP11844 174 aa9.75□□□□□ -0.85
FOXN3-219ENST00000615335 KHDC1LQ5JSQ8 128 aa9.75□□□□□ -0.85
FOXN3-219ENST00000615335 C11orf44Q8N8P7 122 aa9.75□□□□□ -0.85
FOXN3-219ENST00000615335 AGPAT4-IT1Q9H0P7 198 aa9.75□□□□□ -0.85
FOXN3-219ENST00000615335 RNF152Q8N8N0 203 aa9.75□□□□□ -0.85
FOXN3-219ENST00000615335 TOMM6Q96B49 74 aa9.75□□□□□ -0.85
FOXN3-219ENST00000615335 METTL26Q96S19 204 aa9.75□□□□□ -0.85
FOXN3-219ENST00000615335 IGKV3D-20A0A0C4DH25 116 aa9.74□□□□□ -0.85
FOXN3-219ENST00000615335 GATA1P15976 413 aaPredicted RBP9.74□□□□□ -0.85
FOXN3-219ENST00000615335 C2orf82Q6UX34 121 aa9.74□□□□□ -0.85
FOXN3-219ENST00000615335 UBE2E2Q96LR5 201 aa9.74□□□□□ -0.85
FOXN3-219ENST00000615335 IGHV3-49A0A0A0MS15 119 aa9.74□□□□□ -0.85
FOXN3-219ENST00000615335 TRBV12-3P01733 135 aa9.74□□□□□ -0.85
FOXN3-219ENST00000615335 COX7CP15954 63 aa9.74□□□□□ -0.85
FOXN3-219ENST00000615335 HIST2H2BDQ6DRA6 164 aa9.74□□□□□ -0.85
FOXN3-219ENST00000615335 NRACQ8N912 160 aa9.74□□□□□ -0.85
FOXN3-219ENST00000615335 MRPL53Q96EL3 112 aaKnown RBP9.74□□□□□ -0.85
FOXN3-219ENST00000615335 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.73□□□□□ -0.85
FOXN3-219ENST00000615335 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.73□□□□□ -0.85
FOXN3-219ENST00000615335 KIR2DL5BQ8NHK3 375 aa9.73□□□□□ -0.85
FOXN3-219ENST00000615335 TMEM263Q8WUH6 116 aaKnown RBP9.73□□□□□ -0.85
FOXN3-219ENST00000615335 C11orf21Q9P2W6 132 aa9.73□□□□□ -0.85
FOXN3-219ENST00000615335 PROK1P58294 105 aa9.73□□□□□ -0.85
FOXN3-219ENST00000615335 TRBV30A0A0K0K1B3 111 aa9.72□□□□□ -0.85
FOXN3-219ENST00000615335 CD28P10747 220 aa9.72□□□□□ -0.85
FOXN3-219ENST00000615335 C9orf47Q6ZRZ4 202 aa9.71□□□□□ -0.85
FOXN3-219ENST00000615335 C18orf65Q6ZTR6 163 aa9.71□□□□□ -0.85
FOXN3-219ENST00000615335 ZNF256Q9Y2P7 627 aaPredicted RBP9.71□□□□□ -0.85
FOXN3-219ENST00000615335 U3KQE9 123 aa9.71□□□□□ -0.85
FOXN3-219ENST00000615335 F8WDY8 70 aa9.71□□□□□ -0.86
FOXN3-219ENST00000615335 CXCL5P42830 114 aa9.71□□□□□ -0.86
FOXN3-219ENST00000615335 TMEM258P61165 79 aa9.71□□□□□ -0.86
FOXN3-219ENST00000615335 Q1RN00 199 aa9.71□□□□□ -0.86
FOXN3-219ENST00000615335 DUX3Q96PT4 197 aa9.71□□□□□ -0.86
FOXN3-219ENST00000615335 SMIM2Q9BVW6 85 aa9.71□□□□□ -0.86
FOXN3-219ENST00000615335 IGHV7-4-1A0A0J9YVY3 117 aa9.7□□□□□ -0.86
FOXN3-219ENST00000615335 LINC00643Q86TS7 51 aa9.7□□□□□ -0.86
FOXN3-219ENST00000615335 KLHL30-AS1Q8NEE0 82 aa9.7□□□□□ -0.86
FOXN3-219ENST00000615335 KLK5Q9Y337 293 aaPredicted RBP9.7□□□□□ -0.86
FOXN3-219ENST00000615335 A0A1W2PRX2 142 aa9.7□□□□□ -0.86
FOXN3-219ENST00000615335 TRACP01848 142 aa9.7□□□□□ -0.86
FOXN3-219ENST00000615335 C16orf92Q96LL3 132 aa9.7□□□□□ -0.86
FOXN3-219ENST00000615335 OVOL1O14753 267 aa9.69□□□□□ -0.86
FOXN3-219ENST00000615335 DEFB136Q30KP8 78 aa9.69□□□□□ -0.86
FOXN3-219ENST00000615335 SPANXN1Q5VSR9 72 aa9.69□□□□□ -0.86
FOXN3-219ENST00000615335 PRIMA1Q86XR5 153 aa9.69□□□□□ -0.86
FOXN3-219ENST00000615335 C4orf3Q8WVX3 66 aa9.69□□□□□ -0.86
FOXN3-219ENST00000615335 TENM1Q9UKZ4 2725 aa9.68□□□□□ -0.86
FOXN3-219ENST00000615335 IGHV4-4A0A075B6R2 117 aa9.68□□□□□ -0.86
FOXN3-219ENST00000615335 H7C423 109 aa9.68□□□□□ -0.86
FOXN3-219ENST00000615335 IGHV4OR15-8A0A075B7B6 117 aa9.67□□□□□ -0.86
FOXN3-219ENST00000615335 A0A087WW49 117 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms