RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 IGKCP01834 107 aa8.06□□□□□ -1.12
PCDHGC3-202ENST00000611950 ATP5G1P05496 136 aa8.06□□□□□ -1.12
PCDHGC3-202ENST00000611950 MGPP08493 103 aa8.06□□□□□ -1.12
PCDHGC3-202ENST00000611950 HLA-DRB4P13762 266 aa8.06□□□□□ -1.12
PCDHGC3-202ENST00000611950 CYSTM1Q9H1C7 97 aa8.06□□□□□ -1.12
PCDHGC3-202ENST00000611950 HLA-DRB4X5D2U9 266 aa8.06□□□□□ -1.12
PCDHGC3-202ENST00000611950 TRAV8-4A0A0B4J246 113 aa8.06□□□□□ -1.12
PCDHGC3-202ENST00000611950 TCL1BO95988 128 aa8.06□□□□□ -1.12
PCDHGC3-202ENST00000611950 RPL39LQ96EH5 51 aaKnown RBP8.06□□□□□ -1.12
PCDHGC3-202ENST00000611950 IMUPQ9GZP8 106 aa8.06□□□□□ -1.12
PCDHGC3-202ENST00000611950 IGHV7-4-1A0A0J9YVY3 117 aa8.05□□□□□ -1.12
PCDHGC3-202ENST00000611950 S100A4P26447 101 aaKnown RBP8.05□□□□□ -1.12
PCDHGC3-202ENST00000611950 C14orf178Q8N769 122 aaPredicted RBP8.05□□□□□ -1.12
PCDHGC3-202ENST00000611950 WFDC11Q8NEX6 87 aa8.05□□□□□ -1.12
PCDHGC3-202ENST00000611950 C10orf105Q8TEF2 133 aa8.05□□□□□ -1.12
PCDHGC3-202ENST00000611950 SFTA2Q6UW10 78 aa8.05□□□□□ -1.12
PCDHGC3-202ENST00000611950 MAPKAPK5-AS1Q8N8E1 139 aa8.05□□□□□ -1.12
PCDHGC3-202ENST00000611950 EEF1AKMT3Q96AZ1 226 aa8.05□□□□□ -1.12
PCDHGC3-202ENST00000611950 MRPL53Q96EL3 112 aaKnown RBP8.05□□□□□ -1.12
PCDHGC3-202ENST00000611950 TRBV25-1A0A075B6N4 114 aa8.04□□□□□ -1.12
PCDHGC3-202ENST00000611950 NXT2Q9NPJ8 142 aaKnown RBP8.04□□□□□ -1.12
PCDHGC3-202ENST00000611950 COL6A5A8TX70 2615 aa8.04□□□□□ -1.12
PCDHGC3-202ENST00000611950 KLK9Q2XQG4 91 aa8.04□□□□□ -1.12
PCDHGC3-202ENST00000611950 Q6ZS46 218 aa8.04□□□□□ -1.12
PCDHGC3-202ENST00000611950 KLK9Q9UKQ9 250 aa8.04□□□□□ -1.12
PCDHGC3-202ENST00000611950 MXRA5Q9NR99 2828 aa8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 HIST2H2BDQ6DRA6 164 aa8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 C16orf95Q9H693 158 aa8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 GNRH2O43555 120 aa8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 NDUFC2O95298 119 aa8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 IGKV3-20P01619 116 aa8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 PSMB8P28062 276 aa8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 RNASE4P34096 147 aaKnown RBP8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 ZFP2Q6ZN57 461 aa8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 MYOZ3Q8TDC0 251 aa8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 SLC50A1Q9BRV3 221 aa8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 SONP18583 2426 aaKnown RBP8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 HIVEP2P31629 2446 aa8.03□□□□□ -1.12
PCDHGC3-202ENST00000611950 TRAV41A0A0B4J266 112 aa8.02□□□□□ -1.12
PCDHGC3-202ENST00000611950 Q8N1Y9 231 aa8.02□□□□□ -1.12
PCDHGC3-202ENST00000611950 C5orf56Q8N8D9 126 aa8.02□□□□□ -1.12
PCDHGC3-202ENST00000611950 NRACQ8N912 160 aa8.02□□□□□ -1.12
PCDHGC3-202ENST00000611950 PIFOQ8TCI5 191 aa8.02□□□□□ -1.12
PCDHGC3-202ENST00000611950 DNHD1Q96M86 4753 aa8.02□□□□□ -1.12
PCDHGC3-202ENST00000611950 ATRQ13535 2644 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 UBE2D3P61077 147 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 UBE2D2P62837 147 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 LAGE3Q14657 143 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 DEFB113Q30KQ7 82 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 Q8N8P6 123 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 MUC4Q99102 2169 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 WNK1Q9H4A3 2382 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 IGLV2-18A0A075B6J9 118 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 IGHV4-39P01824 125 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 IGHV4-38-2P0DP08 117 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 BLCAPP62952 87 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 BRK1Q8WUW1 75 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 CNFNQ9BYD5 112 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 DPH3P1Q9H4G8 78 aa8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 ZNF256Q9Y2P7 627 aaPredicted RBP8.02□□□□□ -1.13
PCDHGC3-202ENST00000611950 NACAE9PAV3 2078 aa8.01□□□□□ -1.13
PCDHGC3-202ENST00000611950 NEXN-AS1Q8NBZ9 246 aa8.01□□□□□ -1.13
PCDHGC3-202ENST00000611950 STAB1Q9NY15 2570 aa8.01□□□□□ -1.13
PCDHGC3-202ENST00000611950 EPM2AB3EWF7 344 aa8.01□□□□□ -1.13
PCDHGC3-202ENST00000611950 HOXA3O43365 443 aaPredicted RBP8.01□□□□□ -1.13
PCDHGC3-202ENST00000611950 PHLDA3Q9Y5J5 127 aa8.01□□□□□ -1.13
PCDHGC3-202ENST00000611950 ZNF56Q15929 161 aa8□□□□□ -1.13
PCDHGC3-202ENST00000611950 MDFIQ99750 246 aa8□□□□□ -1.13
PCDHGC3-202ENST00000611950 PEMTQ9UBM1 199 aa8□□□□□ -1.13
PCDHGC3-202ENST00000611950 MYMXA0A1B0GTQ4 84 aa8□□□□□ -1.13
PCDHGC3-202ENST00000611950 GPHB5Q86YW7 130 aa8□□□□□ -1.13
PCDHGC3-202ENST00000611950 HIST1H4GQ99525 98 aa8□□□□□ -1.13
PCDHGC3-202ENST00000611950 LOC107984156A0A0G2JMH3 177 aa7.99□□□□□ -1.13
PCDHGC3-202ENST00000611950 ARL17AQ8IVW1 177 aa7.99□□□□□ -1.13
PCDHGC3-202ENST00000611950 SCGB3A1Q96QR1 104 aa7.99□□□□□ -1.13
PCDHGC3-202ENST00000611950 A0A087WWL8 130 aa7.99□□□□□ -1.13
PCDHGC3-202ENST00000611950 TRBV7-1A0A0A6YYK4 115 aa7.99□□□□□ -1.13
PCDHGC3-202ENST00000611950 H3BUX3 64 aa7.99□□□□□ -1.13
PCDHGC3-202ENST00000611950 C19orf54Q5BKX5 351 aa7.99□□□□□ -1.13
PCDHGC3-202ENST00000611950 PSMG4Q5JS54 123 aa7.99□□□□□ -1.13
PCDHGC3-202ENST00000611950 IGHV4-61A0A0C4DH41 118 aa7.98□□□□□ -1.13
PCDHGC3-202ENST00000611950 FAM74A4Q5TZK3 123 aa7.98□□□□□ -1.13
PCDHGC3-202ENST00000611950 C11orf45Q8TAV5 145 aa7.98□□□□□ -1.13
PCDHGC3-202ENST00000611950 SMIM2Q9BVW6 85 aa7.98□□□□□ -1.13
PCDHGC3-202ENST00000611950 U3KQE9 123 aa7.98□□□□□ -1.13
PCDHGC3-202ENST00000611950 SLC25A20O43772 301 aa7.98□□□□□ -1.13
PCDHGC3-202ENST00000611950 LY6G6DO95868 133 aa7.98□□□□□ -1.13
PCDHGC3-202ENST00000611950 C10orf99Q6UWK7 81 aa7.98□□□□□ -1.13
PCDHGC3-202ENST00000611950 C1orf158Q8N1D5 194 aa7.98□□□□□ -1.13
PCDHGC3-202ENST00000611950 ZFAND2AQ8N6M9 145 aa7.98□□□□□ -1.13
PCDHGC3-202ENST00000611950 MOB4Q9Y3A3 225 aa7.98□□□□□ -1.13
PCDHGC3-202ENST00000611950 C9orf47Q6ZRZ4 202 aa7.97□□□□□ -1.13
PCDHGC3-202ENST00000611950 IGHV1-69DA0A0B4J2H0 117 aa7.97□□□□□ -1.13
PCDHGC3-202ENST00000611950 LGALS9O00182 355 aa7.97□□□□□ -1.13
PCDHGC3-202ENST00000611950 IGHV1-69P01742 117 aa7.97□□□□□ -1.13
PCDHGC3-202ENST00000611950 RPL13AP40429 203 aaKnown RBP7.97□□□□□ -1.13
PCDHGC3-202ENST00000611950 SUMO2P61956 95 aaKnown RBP7.97□□□□□ -1.13
PCDHGC3-202ENST00000611950 KLHL30-AS1Q8NEE0 82 aa7.97□□□□□ -1.13
PCDHGC3-202ENST00000611950 NTN5Q8WTR8 489 aaPredicted RBP7.97□□□□□ -1.13
PCDHGC3-202ENST00000611950 TRAV12-2A0A075B6T6 113 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms