RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 HIST1H2BDP58876 126 aa8.24□□□□□ -1.09
CLK4-215ENST00000611733 HIST1H2BCP62807 126 aa8.24□□□□□ -1.09
CLK4-215ENST00000611733 HIST2H2BEQ16778 126 aa8.24□□□□□ -1.09
CLK4-215ENST00000611733 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.24□□□□□ -1.09
CLK4-215ENST00000611733 NIT1Q86X76 327 aa8.24□□□□□ -1.09
CLK4-215ENST00000611733 HIST1H2BHQ93079 126 aa8.24□□□□□ -1.09
CLK4-215ENST00000611733 KIR2DL4Q99706 377 aa8.24□□□□□ -1.09
CLK4-215ENST00000611733 HIST1H2BNQ99877 126 aa8.24□□□□□ -1.09
CLK4-215ENST00000611733 HIST1H2BMQ99879 126 aa8.24□□□□□ -1.09
CLK4-215ENST00000611733 MRPS16Q9Y3D3 137 aaKnown RBP8.24□□□□□ -1.09
CLK4-215ENST00000611733 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.23□□□□□ -1.09
CLK4-215ENST00000611733 IGKV2-29A2NJV5 120 aaPredicted RBP8.23□□□□□ -1.09
CLK4-215ENST00000611733 FCER1GP30273 86 aa8.23□□□□□ -1.09
CLK4-215ENST00000611733 AMTP48728 403 aa8.23□□□□□ -1.09
CLK4-215ENST00000611733 UBE2DNLQ8IWF7 75 aa8.23□□□□□ -1.09
CLK4-215ENST00000611733 DNAH1Q9P2D7 4330 aa8.23□□□□□ -1.09
CLK4-215ENST00000611733 IGHV1-24A0A0C4DH33 117 aa8.22□□□□□ -1.09
CLK4-215ENST00000611733 ESDP10768 282 aa8.22□□□□□ -1.09
CLK4-215ENST00000611733 GAGE6Q13070 117 aa8.22□□□□□ -1.09
CLK4-215ENST00000611733 NXT2Q9NPJ8 142 aaKnown RBP8.22□□□□□ -1.09
CLK4-215ENST00000611733 VPS13DQ5THJ4 4388 aa8.22□□□□□ -1.09
CLK4-215ENST00000611733 TRBV25-1A0A075B6N4 114 aa8.22□□□□□ -1.09
CLK4-215ENST00000611733 NUPR1O60356 82 aa8.22□□□□□ -1.09
CLK4-215ENST00000611733 LY6G6CO95867 125 aa8.22□□□□□ -1.09
CLK4-215ENST00000611733 LINC00310P59036 64 aa8.22□□□□□ -1.09
CLK4-215ENST00000611733 CHCHD5Q9BSY4 110 aa8.22□□□□□ -1.09
CLK4-215ENST00000611733 RPL39P62891 51 aaKnown RBP8.21□□□□□ -1.09
CLK4-215ENST00000611733 Q0VG73 95 aa8.21□□□□□ -1.09
CLK4-215ENST00000611733 LGALS9CQ6DKI2 356 aa8.21□□□□□ -1.09
CLK4-215ENST00000611733 TMEM243Q9BU79 118 aa8.21□□□□□ -1.09
CLK4-215ENST00000611733 TRAV8-6A0A0B4J262 113 aa8.21□□□□□ -1.1
CLK4-215ENST00000611733 TMEM262E9PQX1 116 aa8.21□□□□□ -1.1
CLK4-215ENST00000611733 LINC00614P0C842 121 aa8.21□□□□□ -1.1
CLK4-215ENST00000611733 PMCHL1Q16048 86 aa8.21□□□□□ -1.1
CLK4-215ENST00000611733 TMEM97Q5BJF2 176 aa8.21□□□□□ -1.1
CLK4-215ENST00000611733 LINC00476Q8WZB0 136 aa8.21□□□□□ -1.1
CLK4-215ENST00000611733 Q9H8V8 135 aa8.21□□□□□ -1.1
CLK4-215ENST00000611733 LINC01546A6NGU7 62 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 C1orf196B1AJZ1 125 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 IGHV3-30P01768 117 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 IGHV3-33P01772 117 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 IGHV3-30-3P0DP02 117 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 IGHV3-30-5P0DP03 117 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 LAGE3Q14657 143 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 RNASEKQ6P5S7 137 aaKnown RBP8.2□□□□□ -1.1
CLK4-215ENST00000611733 FA2HQ7L5A8 372 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 BAGE3Q86Y29 109 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 Q8N976 141 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 UPK3BQ9BT76 320 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 MPV17L2Q567V2 206 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 C20orf203Q8NBC4 194 aa8.2□□□□□ -1.1
CLK4-215ENST00000611733 SIVA1O15304 175 aa8.19□□□□□ -1.1
CLK4-215ENST00000611733 SERF1AO75920 110 aa8.19□□□□□ -1.1
CLK4-215ENST00000611733 IGLV4-60A0A075B6I1 120 aa8.18□□□□□ -1.1
CLK4-215ENST00000611733 A0A096LNJ9 63 aa8.18□□□□□ -1.1
CLK4-215ENST00000611733 AP5S1Q9NUS5 200 aa8.18□□□□□ -1.1
CLK4-215ENST00000611733 BTF3P20290 206 aaKnown RBP8.18□□□□□ -1.1
CLK4-215ENST00000611733 OPRPNQ99935 248 aaPredicted RBP8.18□□□□□ -1.1
CLK4-215ENST00000611733 UBE2L6O14933 153 aa8.17□□□□□ -1.1
CLK4-215ENST00000611733 FGF6P10767 208 aa8.17□□□□□ -1.1
CLK4-215ENST00000611733 NDUFA6P56556 154 aa8.17□□□□□ -1.1
CLK4-215ENST00000611733 RBX1P62877 108 aa8.17□□□□□ -1.1
CLK4-215ENST00000611733 ORMDL2Q53FV1 153 aa8.17□□□□□ -1.1
CLK4-215ENST00000611733 FAM19A2Q8N3H0 131 aa8.17□□□□□ -1.1
CLK4-215ENST00000611733 KRTAP1-5Q9BYS1 174 aa8.17□□□□□ -1.1
CLK4-215ENST00000611733 ALMS1Q8TCU4 4167 aa8.17□□□□□ -1.1
CLK4-215ENST00000611733 DNAH10OSP0CZ25 163 aa8.17□□□□□ -1.1
CLK4-215ENST00000611733 C2orf66Q6UXQ4 117 aa8.17□□□□□ -1.1
CLK4-215ENST00000611733 FAM104AQ969W3 186 aa8.17□□□□□ -1.1
CLK4-215ENST00000611733 UBE2D4Q9Y2X8 147 aa8.17□□□□□ -1.1
CLK4-215ENST00000611733 A0A087WX48 190 aa8.16□□□□□ -1.1
CLK4-215ENST00000611733 M0R2N4 97 aa8.16□□□□□ -1.1
CLK4-215ENST00000611733 RAB5BP61020 215 aa8.16□□□□□ -1.1
CLK4-215ENST00000611733 KMT2AQ03164 3969 aa8.15□□□□□ -1.1
CLK4-215ENST00000611733 K7EMI3 77 aa8.15□□□□□ -1.1
CLK4-215ENST00000611733 RNASE13Q5GAN3 156 aaKnown RBP8.15□□□□□ -1.1
CLK4-215ENST00000611733 LINC01556Q5JQF7 62 aa8.15□□□□□ -1.1
CLK4-215ENST00000611733 AMMECR1LQ6DCA0 310 aa8.15□□□□□ -1.11
CLK4-215ENST00000611733 CHCHD1Q96BP2 118 aaKnown RBP8.15□□□□□ -1.11
CLK4-215ENST00000611733 KLK12Q9UKR0 248 aa8.15□□□□□ -1.11
CLK4-215ENST00000611733 HYDINQ4G0P3 5121 aa8.15□□□□□ -1.11
CLK4-215ENST00000611733 TOMM6Q96B49 74 aa8.14□□□□□ -1.11
CLK4-215ENST00000611733 CYSLTR1Q9Y271 337 aa8.14□□□□□ -1.11
CLK4-215ENST00000611733 SACSQ9NZJ4 4579 aa8.14□□□□□ -1.11
CLK4-215ENST00000611733 LCE6AA0A183 80 aa8.14□□□□□ -1.11
CLK4-215ENST00000611733 A0A1B0GUV1 79 aa8.14□□□□□ -1.11
CLK4-215ENST00000611733 H7C423 109 aa8.14□□□□□ -1.11
CLK4-215ENST00000611733 HSBP1O75506 76 aa8.14□□□□□ -1.11
CLK4-215ENST00000611733 ZC2HC1BQ5TFG8 222 aa8.14□□□□□ -1.11
CLK4-215ENST00000611733 CLPSL2Q6UWE3 100 aa8.14□□□□□ -1.11
CLK4-215ENST00000611733 MRPL52Q86TS9 123 aaKnown RBP8.14□□□□□ -1.11
CLK4-215ENST00000611733 IGIPA6NJ69 53 aa8.13□□□□□ -1.11
CLK4-215ENST00000611733 ANGP03950 147 aaKnown RBP8.13□□□□□ -1.11
CLK4-215ENST00000611733 LINC00173Q6ZV60 143 aa8.13□□□□□ -1.11
CLK4-215ENST00000611733 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
CLK4-215ENST00000611733 COA6Q5JTJ3 125 aaKnown RBP8.12□□□□□ -1.11
CLK4-215ENST00000611733 Q6ZUT4 128 aa8.12□□□□□ -1.11
CLK4-215ENST00000611733 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
CLK4-215ENST00000611733 TMEM18Q96B42 140 aa8.12□□□□□ -1.11
CLK4-215ENST00000611733 CDC42SE2Q9NRR3 84 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms