RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 FAM231DQ6ZW35 169 aa3.9□□□□□ -1.79
FOCAD-213ENST00000604254 Q8N1X5 172 aa3.9□□□□□ -1.79
FOCAD-213ENST00000604254 Q8N814 137 aa3.9□□□□□ -1.79
FOCAD-213ENST00000604254 C15orf54Q8N8G6 183 aa3.9□□□□□ -1.79
FOCAD-213ENST00000604254 NTN5Q8WTR8 489 aaPredicted RBP3.9□□□□□ -1.79
FOCAD-213ENST00000604254 GTSF1Q8WW33 167 aa3.9□□□□□ -1.79
FOCAD-213ENST00000604254 CNFNQ9BYD5 112 aa3.9□□□□□ -1.79
FOCAD-213ENST00000604254 COX11Q9Y6N1 276 aa3.9□□□□□ -1.79
FOCAD-213ENST00000604254 APOBP04114 4563 aaKnown RBP3.9□□□□□ -1.79
FOCAD-213ENST00000604254 DMBT1Q9UGM3 2413 aaPredicted RBP3.9□□□□□ -1.79
FOCAD-213ENST00000604254 LECT2O14960 151 aa3.89□□□□□ -1.79
FOCAD-213ENST00000604254 SRP19P09132 144 aaKnown RBP3.89□□□□□ -1.79
FOCAD-213ENST00000604254 GCSHP23434 173 aa3.89□□□□□ -1.79
FOCAD-213ENST00000604254 Q0VG73 95 aa3.89□□□□□ -1.79
FOCAD-213ENST00000604254 GAGE6Q13070 117 aa3.89□□□□□ -1.79
FOCAD-213ENST00000604254 CLPSL2Q6UWE3 100 aa3.89□□□□□ -1.79
FOCAD-213ENST00000604254 TEX261Q6UWH6 196 aa3.89□□□□□ -1.79
FOCAD-213ENST00000604254 NTM-AS1Q6ZSK4 140 aa3.89□□□□□ -1.79
FOCAD-213ENST00000604254 LINC01551Q86U37 167 aa3.89□□□□□ -1.79
FOCAD-213ENST00000604254 PGLYRP4Q96LB8 373 aa3.89□□□□□ -1.79
FOCAD-213ENST00000604254 TMEM243Q9BU79 118 aa3.89□□□□□ -1.79
FOCAD-213ENST00000604254 C1orf43Q9BWL3 253 aa3.89□□□□□ -1.79
FOCAD-213ENST00000604254 NIT2Q9NQR4 276 aa3.89□□□□□ -1.79
FOCAD-213ENST00000604254 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.88□□□□□ -1.79
FOCAD-213ENST00000604254 TRAV26-2A0A0B4J265 109 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 HIGD1CA8MV81 97 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 UBE2L6O14933 153 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 HLA-DQA1P01909 254 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 KRTAP10-1P60331 282 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 COTL1Q14019 142 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 WFDC2Q14508 124 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 PEA15Q15121 130 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 ADIRFQ15847 76 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 IQCJQ1A5X6 159 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 FAM74A3Q4VXF1 159 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 ATRAIDQ6UW56 229 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 Q8N976 141 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 TSKUQ8WUA8 353 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 BAALCQ8WXS3 180 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 FRZBQ92765 325 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 GFRA4Q9GZZ7 299 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 OSTCQ9NRP0 149 aa3.88□□□□□ -1.79
FOCAD-213ENST00000604254 A0A1B0GUT8 65 aa3.87□□□□□ -1.79
FOCAD-213ENST00000604254 AMTP48728 403 aa3.87□□□□□ -1.79
FOCAD-213ENST00000604254 RBX1P62877 108 aa3.87□□□□□ -1.79
FOCAD-213ENST00000604254 MIAQ16674 131 aa3.87□□□□□ -1.79
FOCAD-213ENST00000604254 TMEM241Q24JQ0 296 aa3.87□□□□□ -1.79
FOCAD-213ENST00000604254 ENHOQ6UWT2 76 aa3.87□□□□□ -1.79
FOCAD-213ENST00000604254 LINC00269Q8N2A0 174 aa3.87□□□□□ -1.79
FOCAD-213ENST00000604254 GATD1Q8NB37 220 aa3.87□□□□□ -1.79
FOCAD-213ENST00000604254 DEFB104AQ8WTQ1 72 aa3.87□□□□□ -1.79
FOCAD-213ENST00000604254 ISOC2Q96AB3 205 aa3.87□□□□□ -1.79
FOCAD-213ENST00000604254 RPL39LQ96EH5 51 aaKnown RBP3.87□□□□□ -1.79
FOCAD-213ENST00000604254 NAT8Q9UHE5 227 aa3.87□□□□□ -1.79
FOCAD-213ENST00000604254 FAM231BA6NCW3 169 aa3.86□□□□□ -1.79
FOCAD-213ENST00000604254 APCSP02743 223 aa3.86□□□□□ -1.79
FOCAD-213ENST00000604254 FOXA3P55318 350 aaPredicted RBP3.86□□□□□ -1.79
FOCAD-213ENST00000604254 RPL23P62829 140 aaKnown RBP3.86□□□□□ -1.79
FOCAD-213ENST00000604254 HAMPP81172 84 aa3.86□□□□□ -1.79
FOCAD-213ENST00000604254 RIGQ13278 110 aa3.86□□□□□ -1.79
FOCAD-213ENST00000604254 C14orf177Q52M58 125 aa3.86□□□□□ -1.79
FOCAD-213ENST00000604254 TMEM70Q9BUB7 260 aa3.86□□□□□ -1.79
FOCAD-213ENST00000604254 SMDT1Q9H4I9 107 aa3.86□□□□□ -1.79
FOCAD-213ENST00000604254 V9GYV3 84 aa3.86□□□□□ -1.79
FOCAD-213ENST00000604254 UBR4Q5T4S7 5183 aa3.86□□□□□ -1.79
FOCAD-213ENST00000604254 IGLV10-54A0A075B6I4 117 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 SDHAF1A6NFY7 115 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 EPM2AB3EWF7 344 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 C9JQL5 133 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 NCR2O95944 276 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 XGP55808 180 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 RAB14P61106 215 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 REG3AQ06141 175 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 AMMECR1LQ6DCA0 310 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 AMN1Q8IY45 258 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 NUP35Q8NFH5 326 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 MRAP2Q96G30 205 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 KRTAP3-1Q9BYR8 98 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 TMEM191AQ9H0A3 160 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 ST20Q9HBF5 79 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 PRR34Q9NV39 138 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 NAT8BQ9UHF3 227 aa3.85□□□□□ -1.79
FOCAD-213ENST00000604254 IGLV4-60A0A075B6I1 120 aa3.84□□□□□ -1.79
FOCAD-213ENST00000604254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.84□□□□□ -1.79
FOCAD-213ENST00000604254 TRAV8-4A0A0B4J246 113 aa3.84□□□□□ -1.79
FOCAD-213ENST00000604254 IGKV3OR2-268A0A0C4DH90 116 aa3.84□□□□□ -1.79
FOCAD-213ENST00000604254 TRBV6-5A0A0K0K1A5 114 aa3.84□□□□□ -1.79
FOCAD-213ENST00000604254 A0A1B0GUV1 79 aa3.84□□□□□ -1.79
FOCAD-213ENST00000604254 IGKV2-29A2NJV5 120 aaPredicted RBP3.84□□□□□ -1.79
FOCAD-213ENST00000604254 USP17L23D6RBM5 183 aa3.84□□□□□ -1.79
FOCAD-213ENST00000604254 I3L3M4 83 aa3.84□□□□□ -1.79
FOCAD-213ENST00000604254 PMCHP20382 165 aa3.84□□□□□ -1.79
FOCAD-213ENST00000604254 LINC01620Q4KN68 170 aa3.84□□□□□ -1.79
FOCAD-213ENST00000604254 Q5VSD8 79 aa3.84□□□□□ -1.79
FOCAD-213ENST00000604254 RNASEKQ6P5S7 137 aaKnown RBP3.84□□□□□ -1.79
FOCAD-213ENST00000604254 C20orf203Q8NBC4 194 aa3.84□□□□□ -1.79
FOCAD-213ENST00000604254 A0A1B0GW15 77 aa3.83□□□□□ -1.8
FOCAD-213ENST00000604254 SMIM27A0A1W2PRY6 76 aa3.83□□□□□ -1.8
FOCAD-213ENST00000604254 SMKR1H3BMG3 65 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms