RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 NPC2P61916 151 aa11.17□□□□□ -0.62
LYSMD4-211ENST00000604213 MRPL23Q16540 153 aaKnown RBP11.17□□□□□ -0.62
LYSMD4-211ENST00000604213 DEFB121Q5J5C9 76 aa11.17□□□□□ -0.62
LYSMD4-211ENST00000604213 TMEM61Q8N0U2 210 aa11.17□□□□□ -0.62
LYSMD4-211ENST00000604213 TRGV11A0A075B6L2 103 aa11.16□□□□□ -0.62
LYSMD4-211ENST00000604213 IGHV3-73A0A0B4J1V6 119 aa11.16□□□□□ -0.62
LYSMD4-211ENST00000604213 NBL1P41271 181 aa11.16□□□□□ -0.62
LYSMD4-211ENST00000604213 IGHV4-61A0A0C4DH41 118 aa11.16□□□□□ -0.62
LYSMD4-211ENST00000604213 TMEM95Q3KNT9 176 aa11.15□□□□□ -0.62
LYSMD4-211ENST00000604213 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
LYSMD4-211ENST00000604213 FAM240AA0A1B0GVK7 77 aa11.14□□□□□ -0.63
LYSMD4-211ENST00000604213 DUX3Q96PT4 197 aa11.14□□□□□ -0.63
LYSMD4-211ENST00000604213 YAE1D1Q9NRH1 226 aa11.14□□□□□ -0.63
LYSMD4-211ENST00000604213 RBMY1A1P0DJD3 496 aaKnown RBP11.14□□□□□ -0.63
LYSMD4-211ENST00000604213 RBMY1CP0DJD4 496 aa11.14□□□□□ -0.63
LYSMD4-211ENST00000604213 RBMY1FQ15415 496 aaKnown RBP11.14□□□□□ -0.63
LYSMD4-211ENST00000604213 CHCHD7Q9BUK0 85 aa11.14□□□□□ -0.63
LYSMD4-211ENST00000604213 PSMB8P28062 276 aa11.13□□□□□ -0.63
LYSMD4-211ENST00000604213 Q9UF83 564 aa11.13□□□□□ -0.63
LYSMD4-211ENST00000604213 TNFRSF18Q9Y5U5 241 aa11.13□□□□□ -0.63
LYSMD4-211ENST00000604213 TIMM17BO60830 172 aa11.13□□□□□ -0.63
LYSMD4-211ENST00000604213 UBE2D4Q9Y2X8 147 aa11.13□□□□□ -0.63
LYSMD4-211ENST00000604213 MUC6Q6W4X9 2439 aa11.13□□□□□ -0.63
LYSMD4-211ENST00000604213 SPANXA1Q9NS26 97 aa11.12□□□□□ -0.63
LYSMD4-211ENST00000604213 VPS13CQ709C8 3753 aa11.12□□□□□ -0.63
LYSMD4-211ENST00000604213 DOPEY2Q9Y3R5 2298 aa11.12□□□□□ -0.63
LYSMD4-211ENST00000604213 C10orf99Q6UWK7 81 aa11.11□□□□□ -0.63
LYSMD4-211ENST00000604213 Q6ZSN1 163 aa11.11□□□□□ -0.63
LYSMD4-211ENST00000604213 HIVEP3Q5T1R4 2406 aa11.11□□□□□ -0.63
LYSMD4-211ENST00000604213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.1□□□□□ -0.63
LYSMD4-211ENST00000604213 IGKV2-29A2NJV5 120 aaPredicted RBP11.1□□□□□ -0.63
LYSMD4-211ENST00000604213 DAND5Q8N907 189 aa11.1□□□□□ -0.63
LYSMD4-211ENST00000604213 KNCNA6PVL3 124 aa11.1□□□□□ -0.63
LYSMD4-211ENST00000604213 C19orf84I3L1E1 186 aa11.1□□□□□ -0.63
LYSMD4-211ENST00000604213 HTN1P15515 57 aa11.1□□□□□ -0.63
LYSMD4-211ENST00000604213 CITED2Q99967 270 aaPredicted RBP11.1□□□□□ -0.63
LYSMD4-211ENST00000604213 PIMREGQ9BSJ6 248 aa11.1□□□□□ -0.63
LYSMD4-211ENST00000604213 TRBV7-7A0A0K0K1E9 115 aa11.09□□□□□ -0.63
LYSMD4-211ENST00000604213 LINC00467Q9BRT7 94 aa11.09□□□□□ -0.63
LYSMD4-211ENST00000604213 NDUFA1O15239 70 aa11.09□□□□□ -0.63
LYSMD4-211ENST00000604213 SYNJ2BPP57105 145 aa11.09□□□□□ -0.63
LYSMD4-211ENST00000604213 CDKN2A-AS1Q9UH64 79 aa11.09□□□□□ -0.63
LYSMD4-211ENST00000604213 IGF2RP11717 2491 aa11.08□□□□□ -0.64
LYSMD4-211ENST00000604213 SORL1Q92673 2214 aa11.08□□□□□ -0.64
LYSMD4-211ENST00000604213 PRM2P04554 102 aa11.08□□□□□ -0.64
LYSMD4-211ENST00000604213 C10orf105Q8TEF2 133 aa11.08□□□□□ -0.64
LYSMD4-211ENST00000604213 TMEM101Q96IK0 257 aa11.08□□□□□ -0.64
LYSMD4-211ENST00000604213 COL12A1Q99715 3063 aa11.07□□□□□ -0.64
LYSMD4-211ENST00000604213 IGLV5-45A0A087WSX0 123 aa11.06□□□□□ -0.64
LYSMD4-211ENST00000604213 UCNP55089 124 aa11.06□□□□□ -0.64
LYSMD4-211ENST00000604213 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.06□□□□□ -0.64
LYSMD4-211ENST00000604213 TIRAPP58753 221 aa11.06□□□□□ -0.64
LYSMD4-211ENST00000604213 MEIG1Q5JSS6 88 aa11.06□□□□□ -0.64
LYSMD4-211ENST00000604213 CHCHD5Q9BSY4 110 aa11.06□□□□□ -0.64
LYSMD4-211ENST00000604213 NACAE9PAV3 2078 aa11.05□□□□□ -0.64
LYSMD4-211ENST00000604213 AVPP01185 164 aa11.05□□□□□ -0.64
LYSMD4-211ENST00000604213 LINC00308Q8TCZ7 52 aa11.05□□□□□ -0.64
LYSMD4-211ENST00000604213 DUX5Q96PT3 197 aa11.05□□□□□ -0.64
LYSMD4-211ENST00000604213 FAM110AQ9BQ89 295 aa11.05□□□□□ -0.64
LYSMD4-211ENST00000604213 IGHV3-38A0A0C4DH36 116 aa11.04□□□□□ -0.64
LYSMD4-211ENST00000604213 TMEM89A2RUT3 159 aa11.04□□□□□ -0.64
LYSMD4-211ENST00000604213 MSMBP08118 114 aa11.04□□□□□ -0.64
LYSMD4-211ENST00000604213 PIK3CD-AS1Q5SR53 167 aa11.04□□□□□ -0.64
LYSMD4-211ENST00000604213 CIRBPQ14011 172 aaKnown RBP11.04□□□□□ -0.64
LYSMD4-211ENST00000604213 SMIM20Q8N5G0 67 aa11.04□□□□□ -0.64
LYSMD4-211ENST00000604213 RBMY1BA6NDE4 496 aaKnown RBP11.03□□□□□ -0.64
LYSMD4-211ENST00000604213 RBMY1EA6NEQ0 496 aaKnown RBP11.03□□□□□ -0.64
LYSMD4-211ENST00000604213 COX7A2LO14548 114 aa11.03□□□□□ -0.64
LYSMD4-211ENST00000604213 RBMY1DP0C7P1 496 aaKnown RBP11.03□□□□□ -0.64
LYSMD4-211ENST00000604213 COX6A2Q02221 97 aa11.03□□□□□ -0.64
LYSMD4-211ENST00000604213 IGHV4-30-2A0A087WSY4 118 aa11.03□□□□□ -0.64
LYSMD4-211ENST00000604213 IGLV5-39A0A0G2JS06 123 aa11.03□□□□□ -0.64
LYSMD4-211ENST00000604213 A8MTW9 85 aa11.03□□□□□ -0.64
LYSMD4-211ENST00000604213 IGHV4-59P01825 116 aa11.03□□□□□ -0.64
LYSMD4-211ENST00000604213 ACYP1P07311 99 aa11.03□□□□□ -0.64
LYSMD4-211ENST00000604213 DNAJC30Q96LL9 226 aa11.02□□□□□ -0.65
LYSMD4-211ENST00000604213 Q9H8V8 135 aa11.02□□□□□ -0.65
LYSMD4-211ENST00000604213 IGHV3-53P01767 116 aa11.02□□□□□ -0.65
LYSMD4-211ENST00000604213 HOXD3P31249 432 aaPredicted RBP11.02□□□□□ -0.65
LYSMD4-211ENST00000604213 DEFB131AP59861 70 aa11.02□□□□□ -0.65
LYSMD4-211ENST00000604213 ZNF415Q09FC8 603 aa11.02□□□□□ -0.65
LYSMD4-211ENST00000604213 IGHV3OR16-12A0A075B7B8 117 aa11.01□□□□□ -0.65
LYSMD4-211ENST00000604213 SHISA2Q6UWI4 295 aa11.01□□□□□ -0.65
LYSMD4-211ENST00000604213 SOSTDC1Q6X4U4 206 aa11.01□□□□□ -0.65
LYSMD4-211ENST00000604213 Q8N2B8 174 aa11.01□□□□□ -0.65
LYSMD4-211ENST00000604213 SMCR5Q8TEV8 140 aa11.01□□□□□ -0.65
LYSMD4-211ENST00000604213 LINC01587Q99440 93 aa11.01□□□□□ -0.65
LYSMD4-211ENST00000604213 IMUPQ9GZP8 106 aa11.01□□□□□ -0.65
LYSMD4-211ENST00000604213 ZNF625Q96I27 306 aaPredicted RBP11□□□□□ -0.65
LYSMD4-211ENST00000604213 PRORYQ9H606 182 aa11□□□□□ -0.65
LYSMD4-211ENST00000604213 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11□□□□□ -0.659e-6■■□□□ 12.6
LYSMD4-211ENST00000604213 A0A0U1RRA0 63 aa10.99□□□□□ -0.65
LYSMD4-211ENST00000604213 HERV-K104P63124 156 aa10.99□□□□□ -0.65
LYSMD4-211ENST00000604213 DEFB112Q30KQ8 113 aa10.99□□□□□ -0.65
LYSMD4-211ENST00000604213 LINC00242Q5T6M2 205 aa10.99□□□□□ -0.65
LYSMD4-211ENST00000604213 CCL19Q99731 98 aa10.99□□□□□ -0.65
LYSMD4-211ENST00000604213 BEAN1Q3B7T3 259 aa10.99□□□□□ -0.65
LYSMD4-211ENST00000604213 C11orf72Q8NBR9 251 aa10.99□□□□□ -0.65
LYSMD4-211ENST00000604213 FAM236AA0A1B0GUQ0 79 aa10.98□□□□□ -0.65
LYSMD4-211ENST00000604213 FAM236BA0A1B0GV22 79 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms