RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 MRPL54Q6P161 138 aaKnown RBP10.85□□□□□ -0.67
CDCA3-211ENST00000603043 LYZL1Q6UWQ5 148 aa10.85□□□□□ -0.67
CDCA3-211ENST00000603043 GTF2H5Q6ZYL4 71 aa10.85□□□□□ -0.67
CDCA3-211ENST00000603043 A0A087WWL8 130 aa10.85□□□□□ -0.67
CDCA3-211ENST00000603043 A8MWL6 223 aa10.85□□□□□ -0.67
CDCA3-211ENST00000603043 RHODO00212 210 aa10.85□□□□□ -0.67
CDCA3-211ENST00000603043 PMCHL2Q9BQD1 86 aa10.85□□□□□ -0.67
CDCA3-211ENST00000603043 P0DMU3 169 aa10.84□□□□□ -0.67
CDCA3-211ENST00000603043 FAM231AP0DMU4 169 aa10.84□□□□□ -0.67
CDCA3-211ENST00000603043 FAM231CP0DMU5 169 aa10.84□□□□□ -0.67
CDCA3-211ENST00000603043 CACNG7P62955 275 aa10.84□□□□□ -0.67
CDCA3-211ENST00000603043 UFSP1Q6NVU6 142 aa10.84□□□□□ -0.67
CDCA3-211ENST00000603043 GTSF1Q8WW33 167 aa10.84□□□□□ -0.67
CDCA3-211ENST00000603043 CRYGDP07320 174 aa10.83□□□□□ -0.68
CDCA3-211ENST00000603043 SLC25A29Q8N8R3 303 aa10.83□□□□□ -0.68
CDCA3-211ENST00000603043 ICOSQ9Y6W8 199 aa10.83□□□□□ -0.68
CDCA3-211ENST00000603043 A0A096LPF7 62 aa10.83□□□□□ -0.68
CDCA3-211ENST00000603043 SEC11AP67812 179 aa10.83□□□□□ -0.68
CDCA3-211ENST00000603043 AP1S3Q96PC3 154 aa10.83□□□□□ -0.68
CDCA3-211ENST00000603043 TMEM191AQ9H0A3 160 aa10.83□□□□□ -0.68
CDCA3-211ENST00000603043 ALMS1Q8TCU4 4167 aa10.82□□□□□ -0.68
CDCA3-211ENST00000603043 TRBV6-4A0A1B0GX49 114 aa10.82□□□□□ -0.68
CDCA3-211ENST00000603043 GYPEP15421 78 aa10.82□□□□□ -0.68
CDCA3-211ENST00000603043 MSRB1Q9NZV6 116 aa10.82□□□□□ -0.68
CDCA3-211ENST00000603043 GAGE10A6NGK3 116 aa10.81□□□□□ -0.68
CDCA3-211ENST00000603043 RHOHQ15669 191 aa10.81□□□□□ -0.68
CDCA3-211ENST00000603043 MRPL23Q16540 153 aaKnown RBP10.81□□□□□ -0.68
CDCA3-211ENST00000603043 UBE2DNLQ8IWF7 75 aa10.81□□□□□ -0.68
CDCA3-211ENST00000603043 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
CDCA3-211ENST00000603043 CNFNQ9BYD5 112 aa10.81□□□□□ -0.68
CDCA3-211ENST00000603043 GFRA4Q9GZZ7 299 aa10.81□□□□□ -0.68
CDCA3-211ENST00000603043 K7EQD1 137 aa10.81□□□□□ -0.68
CDCA3-211ENST00000603043 SMIM17P0DL12 118 aa10.81□□□□□ -0.68
CDCA3-211ENST00000603043 Q6ZSN1 163 aa10.81□□□□□ -0.68
CDCA3-211ENST00000603043 ERASQ7Z444 233 aa10.81□□□□□ -0.68
CDCA3-211ENST00000603043 C14orf178Q8N769 122 aaPredicted RBP10.81□□□□□ -0.68
CDCA3-211ENST00000603043 TRAV8-6A0A0B4J262 113 aa10.8□□□□□ -0.68
CDCA3-211ENST00000603043 FOXA3P55318 350 aaPredicted RBP10.8□□□□□ -0.68
CDCA3-211ENST00000603043 RNASEKQ6P5S7 137 aaKnown RBP10.8□□□□□ -0.68
CDCA3-211ENST00000603043 CHCHD1Q96BP2 118 aaKnown RBP10.8□□□□□ -0.68
CDCA3-211ENST00000603043 PGLYRP4Q96LB8 373 aa10.8□□□□□ -0.68
CDCA3-211ENST00000603043 SACSQ9NZJ4 4579 aa10.8□□□□□ -0.68
CDCA3-211ENST00000603043 LOC100131303A0A0U1RQF7 123 aa10.79□□□□□ -0.68
CDCA3-211ENST00000603043 FAM231BA6NCW3 169 aa10.79□□□□□ -0.68
CDCA3-211ENST00000603043 A6NJY4 79 aa10.79□□□□□ -0.68
CDCA3-211ENST00000603043 HIGD1CA8MV81 97 aa10.79□□□□□ -0.68
CDCA3-211ENST00000603043 CCL18P55774 89 aa10.79□□□□□ -0.68
CDCA3-211ENST00000603043 ZNF56Q15929 161 aa10.79□□□□□ -0.68
CDCA3-211ENST00000603043 DNAH1Q9P2D7 4330 aa10.79□□□□□ -0.68
CDCA3-211ENST00000603043 SYS1-DBNDD2H3BUS1 97 aa10.79□□□□□ -0.68
CDCA3-211ENST00000603043 TWIST1Q15672 202 aa10.79□□□□□ -0.68
CDCA3-211ENST00000603043 ATP5L2Q7Z4Y8 100 aa10.79□□□□□ -0.68
CDCA3-211ENST00000603043 NEGR1Q7Z3B1 354 aa10.78□□□□□ -0.68
CDCA3-211ENST00000603043 KIF25-AS1Q9Y6Z4 181 aa10.78□□□□□ -0.68
CDCA3-211ENST00000603043 SPATA12Q7Z6I5 190 aa10.77□□□□□ -0.68
CDCA3-211ENST00000603043 LINC00588Q9Y4M8 146 aa10.77□□□□□ -0.68
CDCA3-211ENST00000603043 F5H697 171 aa10.77□□□□□ -0.69
CDCA3-211ENST00000603043 H3BRM9 83 aa10.77□□□□□ -0.69
CDCA3-211ENST00000603043 K7EP34 96 aa10.77□□□□□ -0.69
CDCA3-211ENST00000603043 EVI2AP22794 236 aa10.77□□□□□ -0.69
CDCA3-211ENST00000603043 ESRGQ1W209 222 aa10.77□□□□□ -0.69
CDCA3-211ENST00000603043 OR5A1Q8NGJ0 315 aa10.77□□□□□ -0.69
CDCA3-211ENST00000603043 A0A1B0GV72 72 aa10.76□□□□□ -0.69
CDCA3-211ENST00000603043 A6NDN8 102 aa10.76□□□□□ -0.69
CDCA3-211ENST00000603043 C9orf118A6NHY6 69 aa10.76□□□□□ -0.69
CDCA3-211ENST00000603043 SH2D6Q7Z4S9 175 aa10.76□□□□□ -0.69
CDCA3-211ENST00000603043 VPS13DQ5THJ4 4388 aa10.76□□□□□ -0.69
CDCA3-211ENST00000603043 A0A1B0GUT8 65 aa10.76□□□□□ -0.69
CDCA3-211ENST00000603043 MGPP08493 103 aa10.76□□□□□ -0.69
CDCA3-211ENST00000603043 DPH3P1Q9H4G8 78 aa10.76□□□□□ -0.69
CDCA3-211ENST00000603043 HYDINQ4G0P3 5121 aa10.75□□□□□ -0.69
CDCA3-211ENST00000603043 LINC00315P59091 139 aa10.75□□□□□ -0.69
CDCA3-211ENST00000603043 NUP35Q8NFH5 326 aa10.75□□□□□ -0.69
CDCA3-211ENST00000603043 Q9UF83 564 aa10.75□□□□□ -0.69
CDCA3-211ENST00000603043 hDV102S1A0JD36 115 aa10.74□□□□□ -0.69
CDCA3-211ENST00000603043 LEPROTL1O95214 131 aa10.74□□□□□ -0.69
CDCA3-211ENST00000603043 COX8AP10176 69 aa10.74□□□□□ -0.69
CDCA3-211ENST00000603043 LYPD5Q6UWN5 251 aa10.74□□□□□ -0.69
CDCA3-211ENST00000603043 MAP1LC3CQ9BXW4 147 aa10.74□□□□□ -0.69
CDCA3-211ENST00000603043 TRBV10-1A0A0K0K1A3 114 aa10.74□□□□□ -0.69
CDCA3-211ENST00000603043 GAGE12JA6NER3 117 aa10.74□□□□□ -0.69
CDCA3-211ENST00000603043 GAGE4Q13068 117 aa10.74□□□□□ -0.69
CDCA3-211ENST00000603043 GAGE5Q13069 117 aa10.74□□□□□ -0.69
CDCA3-211ENST00000603043 GAGE13Q4V321 117 aa10.74□□□□□ -0.69
CDCA3-211ENST00000603043 TMEM97Q5BJF2 176 aa10.74□□□□□ -0.69
CDCA3-211ENST00000603043 RYR2Q92736 4967 aa10.73□□□□□ -0.69
CDCA3-211ENST00000603043 IGHV1-24A0A0C4DH33 117 aa10.72□□□□□ -0.69
CDCA3-211ENST00000603043 LINC00694P0DN24 101 aa10.72□□□□□ -0.69
CDCA3-211ENST00000603043 ATP6V0E2Q8NHE4 81 aa10.72□□□□□ -0.69
CDCA3-211ENST00000603043 URB1-AS1Q96HZ7 61 aa10.72□□□□□ -0.69
CDCA3-211ENST00000603043 HSPB8Q9UJY1 196 aa10.72□□□□□ -0.69
CDCA3-211ENST00000603043 RYR3Q15413 4870 aa10.72□□□□□ -0.69
CDCA3-211ENST00000603043 KMT2AQ03164 3969 aa10.72□□□□□ -0.69
CDCA3-211ENST00000603043 A0A1B0GXF2 115 aa10.72□□□□□ -0.69
CDCA3-211ENST00000603043 RPL36AP83881 106 aaKnown RBP10.72□□□□□ -0.69
CDCA3-211ENST00000603043 RIGQ13278 110 aa10.72□□□□□ -0.69
CDCA3-211ENST00000603043 ZNRF2Q8NHG8 242 aa10.72□□□□□ -0.69
CDCA3-211ENST00000603043 RPL36ALQ969Q0 106 aaKnown RBP10.72□□□□□ -0.69
CDCA3-211ENST00000603043 UPK3BQ9BT76 320 aa10.72□□□□□ -0.69
CDCA3-211ENST00000603043 TRBV7-3A0A075B6L6 115 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms