RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 OR10J3Q5JRS4 329 aa11.36□□□□□ -0.59
SSBP4-207ENST00000600244 C14orf178Q8N769 122 aaPredicted RBP11.36□□□□□ -0.59
SSBP4-207ENST00000600244 TMEM242Q9NWH2 141 aa11.36□□□□□ -0.59
SSBP4-207ENST00000600244 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
SSBP4-207ENST00000600244 TRBV6-4A0A1B0GX49 114 aa11.35□□□□□ -0.59
SSBP4-207ENST00000600244 APOC3P02656 99 aa11.35□□□□□ -0.59
SSBP4-207ENST00000600244 TRGC1P0CF51 173 aa11.35□□□□□ -0.59
SSBP4-207ENST00000600244 RHEBQ15382 184 aa11.35□□□□□ -0.59
SSBP4-207ENST00000600244 TWIST1Q15672 202 aa11.35□□□□□ -0.59
SSBP4-207ENST00000600244 SLC25A29Q8N8R3 303 aa11.35□□□□□ -0.59
SSBP4-207ENST00000600244 IMMP2LQ96T52 175 aa11.35□□□□□ -0.59
SSBP4-207ENST00000600244 FAM74A4Q5TZK3 123 aa11.34□□□□□ -0.59
SSBP4-207ENST00000600244 SVBPQ8N300 66 aa11.34□□□□□ -0.59
SSBP4-207ENST00000600244 A0A1B0GXF2 115 aa11.33□□□□□ -0.6
SSBP4-207ENST00000600244 RAB4BP61018 213 aa11.33□□□□□ -0.6
SSBP4-207ENST00000600244 RIGQ13278 110 aa11.33□□□□□ -0.6
SSBP4-207ENST00000600244 Q8N3U1 123 aa11.33□□□□□ -0.6
SSBP4-207ENST00000600244 BORCS7Q96B45 105 aa11.33□□□□□ -0.6
SSBP4-207ENST00000600244 LINC01600Q96MT4 127 aa11.33□□□□□ -0.6
SSBP4-207ENST00000600244 SNAPINO95295 136 aa11.32□□□□□ -0.6
SSBP4-207ENST00000600244 DPH3P1Q9H4G8 78 aa11.32□□□□□ -0.6
SSBP4-207ENST00000600244 COX11Q9Y6N1 276 aa11.32□□□□□ -0.6
SSBP4-207ENST00000600244 RHOHQ15669 191 aa11.31□□□□□ -0.6
SSBP4-207ENST00000600244 GATD1Q8NB37 220 aa11.31□□□□□ -0.6
SSBP4-207ENST00000600244 ATP6V0E2Q8NHE4 81 aa11.31□□□□□ -0.6
SSBP4-207ENST00000600244 TMEM191AQ9H0A3 160 aa11.31□□□□□ -0.6
SSBP4-207ENST00000600244 Q9UF83 564 aa11.31□□□□□ -0.6
SSBP4-207ENST00000600244 A0A1B0GW15 77 aa11.3□□□□□ -0.6
SSBP4-207ENST00000600244 SMIM17P0DL12 118 aa11.3□□□□□ -0.6
SSBP4-207ENST00000600244 LINC00694P0DN24 101 aa11.3□□□□□ -0.6
SSBP4-207ENST00000600244 ATP5L2Q7Z4Y8 100 aa11.3□□□□□ -0.6
SSBP4-207ENST00000600244 RPS10P5Q9NQ39 176 aa11.3□□□□□ -0.6
SSBP4-207ENST00000600244 TRBV10-1A0A0K0K1A3 114 aa11.29□□□□□ -0.6
SSBP4-207ENST00000600244 ATRAIDQ6UW56 229 aa11.29□□□□□ -0.6
SSBP4-207ENST00000600244 PRADC1Q9BSG0 188 aa11.29□□□□□ -0.6
SSBP4-207ENST00000600244 TRAV9-1A0A075B6T8 112 aa11.28□□□□□ -0.6
SSBP4-207ENST00000600244 M0QY20 66 aa11.28□□□□□ -0.6
SSBP4-207ENST00000600244 ZNF56Q15929 161 aa11.28□□□□□ -0.6
SSBP4-207ENST00000600244 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
SSBP4-207ENST00000600244 DAZ4Q86SG3 579 aaKnown RBP11.28□□□□□ -0.6
SSBP4-207ENST00000600244 RNF185Q96GF1 192 aa11.28□□□□□ -0.6
SSBP4-207ENST00000600244 BTF3L4Q96K17 158 aa11.28□□□□□ -0.6
SSBP4-207ENST00000600244 DAZ3Q9NR90 486 aaKnown RBP11.28□□□□□ -0.6
SSBP4-207ENST00000600244 HBBP68871 147 aa11.27□□□□□ -0.61
SSBP4-207ENST00000600244 MRPL54Q6P161 138 aaKnown RBP11.27□□□□□ -0.61
SSBP4-207ENST00000600244 SMIM15Q7Z3B0 74 aa11.27□□□□□ -0.61
SSBP4-207ENST00000600244 F5H697 171 aa11.26□□□□□ -0.61
SSBP4-207ENST00000600244 MGPP08493 103 aa11.26□□□□□ -0.61
SSBP4-207ENST00000600244 RAB4AP20338 218 aa11.26□□□□□ -0.61
SSBP4-207ENST00000600244 CAMPP49913 170 aa11.26□□□□□ -0.61
SSBP4-207ENST00000600244 KRTAP10-8P60410 259 aa11.26□□□□□ -0.61
SSBP4-207ENST00000600244 KCNIP4Q6PIL6 250 aa11.26□□□□□ -0.61
SSBP4-207ENST00000600244 S100A8P05109 93 aa11.25□□□□□ -0.61
SSBP4-207ENST00000600244 RASL11AQ6T310 242 aa11.25□□□□□ -0.61
SSBP4-207ENST00000600244 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
SSBP4-207ENST00000600244 NEXN-AS1Q8NBZ9 246 aa11.25□□□□□ -0.61
SSBP4-207ENST00000600244 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.25□□□□□ -0.61
SSBP4-207ENST00000600244 PANO1I0J062 215 aa11.24□□□□□ -0.61
SSBP4-207ENST00000600244 LCE2AQ5TA79 106 aaPredicted RBP11.24□□□□□ -0.61
SSBP4-207ENST00000600244 FAM104BQ5XKR9 115 aa11.24□□□□□ -0.61
SSBP4-207ENST00000600244 DNAJC30Q96LL9 226 aa11.24□□□□□ -0.61
SSBP4-207ENST00000600244 GTSF1LQ9H1H1 148 aa11.24□□□□□ -0.61
SSBP4-207ENST00000600244 TRBV7-3A0A075B6L6 115 aa11.23□□□□□ -0.61
SSBP4-207ENST00000600244 H7C1H1 209 aa11.23□□□□□ -0.61
SSBP4-207ENST00000600244 S100PP25815 95 aa11.23□□□□□ -0.61
SSBP4-207ENST00000600244 RMI2Q96E14 147 aa11.23□□□□□ -0.61
SSBP4-207ENST00000600244 YPEL4Q96NS1 127 aa11.23□□□□□ -0.61
SSBP4-207ENST00000600244 URGCP-MRPS24S4R325 110 aa11.23□□□□□ -0.61
SSBP4-207ENST00000600244 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
SSBP4-207ENST00000600244 A0A0J9YXV3 536 aa11.22□□□□□ -0.61
SSBP4-207ENST00000600244 GAGE12JA6NER3 117 aa11.22□□□□□ -0.61
SSBP4-207ENST00000600244 UBE2D3P61077 147 aa11.22□□□□□ -0.61
SSBP4-207ENST00000600244 UBE2D2P62837 147 aa11.22□□□□□ -0.61
SSBP4-207ENST00000600244 GAGE1Q13065 139 aa11.22□□□□□ -0.61
SSBP4-207ENST00000600244 GAGE4Q13068 117 aa11.22□□□□□ -0.61
SSBP4-207ENST00000600244 GAGE5Q13069 117 aa11.22□□□□□ -0.61
SSBP4-207ENST00000600244 GAGE13Q4V321 117 aa11.22□□□□□ -0.61
SSBP4-207ENST00000600244 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
SSBP4-207ENST00000600244 NIT2Q9NQR4 276 aa11.22□□□□□ -0.61
SSBP4-207ENST00000600244 IGKV2D-24A0A075B6R9 120 aa11.21□□□□□ -0.61
SSBP4-207ENST00000600244 RPL36AP83881 106 aaKnown RBP11.21□□□□□ -0.61
SSBP4-207ENST00000600244 ELOBQ15370 118 aa11.21□□□□□ -0.61
SSBP4-207ENST00000600244 MRPL51Q4U2R6 128 aaKnown RBP11.21□□□□□ -0.61
SSBP4-207ENST00000600244 RPL36ALQ969Q0 106 aaKnown RBP11.21□□□□□ -0.61
SSBP4-207ENST00000600244 TRBV24-1A0A075B6N3 115 aa11.2□□□□□ -0.62
SSBP4-207ENST00000600244 TMEM136Q6ZRR5 245 aa11.2□□□□□ -0.62
SSBP4-207ENST00000600244 TRBV6-5A0A0K0K1A5 114 aa11.19□□□□□ -0.62
SSBP4-207ENST00000600244 RPS10P46783 165 aaKnown RBP11.19□□□□□ -0.62
SSBP4-207ENST00000600244 C14orf177Q52M58 125 aa11.19□□□□□ -0.62
SSBP4-207ENST00000600244 NRACQ8N912 160 aa11.19□□□□□ -0.62
SSBP4-207ENST00000600244 RPL39LQ96EH5 51 aaKnown RBP11.19□□□□□ -0.62
SSBP4-207ENST00000600244 C9orf163Q8N9P6 203 aa11.18□□□□□ -0.62
SSBP4-207ENST00000600244 TGIF2-C20orf24A0A0A6YYL0 155 aa11.17□□□□□ -0.62
SSBP4-207ENST00000600244 A0A0U1RQV1 116 aa11.17□□□□□ -0.62
SSBP4-207ENST00000600244 COX19Q49B96 90 aa11.17□□□□□ -0.62
SSBP4-207ENST00000600244 GNB1LQ9BYB4 327 aa11.17□□□□□ -0.62
SSBP4-207ENST00000600244 SMCO4Q9NRQ5 59 aa11.17□□□□□ -0.62
SSBP4-207ENST00000600244 SMKR1H3BMG3 65 aa11.16□□□□□ -0.62
SSBP4-207ENST00000600244 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
SSBP4-207ENST00000600244 SDIM1Q6ZPB5 146 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms