RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 FAM104AQ969W3 186 aa14.22□□□□□ -0.13
ARHGEF1-218ENST00000599589 CFAP46Q8IYW2 2715 aa14.22□□□□□ -0.13
ARHGEF1-218ENST00000599589 DCANP1Q8TF63 244 aa14.21□□□□□ -0.13
ARHGEF1-218ENST00000599589 USMG5Q96IX5 58 aa14.21□□□□□ -0.13
ARHGEF1-218ENST00000599589 MIAQ16674 131 aa14.21□□□□□ -0.14
ARHGEF1-218ENST00000599589 IGHV1-58A0A0C4DH39 117 aa14.2□□□□□ -0.14
ARHGEF1-218ENST00000599589 LST1O00453 97 aa14.2□□□□□ -0.14
ARHGEF1-218ENST00000599589 MRPS36P82909 103 aaKnown RBP14.2□□□□□ -0.14
ARHGEF1-218ENST00000599589 LY6EQ16553 131 aa14.2□□□□□ -0.14
ARHGEF1-218ENST00000599589 BRD3OSQ6XYD6 125 aa14.2□□□□□ -0.14
ARHGEF1-218ENST00000599589 IGHV4-30-2A0A087WSY4 118 aa14.19□□□□□ -0.14
ARHGEF1-218ENST00000599589 IGSF10Q6WRI0 2623 aa14.19□□□□□ -0.14
ARHGEF1-218ENST00000599589 FAM240AA0A1B0GVK7 77 aa14.18□□□□□ -0.14
ARHGEF1-218ENST00000599589 C3orf56Q8N813 242 aa14.18□□□□□ -0.14
ARHGEF1-218ENST00000599589 TRGV11A0A075B6L2 103 aa14.18□□□□□ -0.14
ARHGEF1-218ENST00000599589 DEFB121Q5J5C9 76 aa14.18□□□□□ -0.14
ARHGEF1-218ENST00000599589 ACACBO00763 2458 aa14.18□□□□□ -0.14
ARHGEF1-218ENST00000599589 IGHV1OR15-1A0A075B7D0 117 aa14.17□□□□□ -0.14
ARHGEF1-218ENST00000599589 TMEM61Q8N0U2 210 aa14.17□□□□□ -0.14
ARHGEF1-218ENST00000599589 DOPEY1Q5JWR5 2465 aa14.17□□□□□ -0.14
ARHGEF1-218ENST00000599589 IGHV3-73A0A0B4J1V6 119 aa14.17□□□□□ -0.14
ARHGEF1-218ENST00000599589 VSIG2Q96IQ7 327 aa14.17□□□□□ -0.14
ARHGEF1-218ENST00000599589 SPINK13Q1W4C9 94 aa14.16□□□□□ -0.14
ARHGEF1-218ENST00000599589 SPANXA1Q9NS26 97 aa14.16□□□□□ -0.14
ARHGEF1-218ENST00000599589 PYGO1Q9Y3Y4 419 aa14.16□□□□□ -0.14
ARHGEF1-218ENST00000599589 DAND5Q8N907 189 aa14.16□□□□□ -0.14
ARHGEF1-218ENST00000599589 MSMBP08118 114 aa14.15□□□□□ -0.14
ARHGEF1-218ENST00000599589 IGHV4-38-2P0DP08 117 aa14.15□□□□□ -0.14
ARHGEF1-218ENST00000599589 CFAP161Q6P656 301 aa14.15□□□□□ -0.14
ARHGEF1-218ENST00000599589 ABCA2Q9BZC7 2435 aa14.15□□□□□ -0.15
ARHGEF1-218ENST00000599589 TRBV7-7A0A0K0K1E9 115 aa14.14□□□□□ -0.15
ARHGEF1-218ENST00000599589 PROK1P58294 105 aa14.14□□□□□ -0.15
ARHGEF1-218ENST00000599589 COL12A1Q99715 3063 aa14.14□□□□□ -0.15
ARHGEF1-218ENST00000599589 H3BUA1 57 aa14.14□□□□□ -0.15
ARHGEF1-218ENST00000599589 BRI3O95415 125 aa14.14□□□□□ -0.15
ARHGEF1-218ENST00000599589 IGHG2P01859 326 aa14.13□□□□□ -0.15
ARHGEF1-218ENST00000599589 DSCR9P59020 149 aa14.13□□□□□ -0.15
ARHGEF1-218ENST00000599589 BLCAPP62952 87 aa14.13□□□□□ -0.15
ARHGEF1-218ENST00000599589 YAE1D1Q9NRH1 226 aa14.13□□□□□ -0.15
ARHGEF1-218ENST00000599589 PRB1P04280 392 aa14.12□□□□□ -0.15
ARHGEF1-218ENST00000599589 TINCRA0A1B0GVN0 87 aa14.11□□□□□ -0.15
ARHGEF1-218ENST00000599589 TMEM101Q96IK0 257 aa14.11□□□□□ -0.15
ARHGEF1-218ENST00000599589 B4DSR2 109 aa14.11□□□□□ -0.15
ARHGEF1-218ENST00000599589 LINC01587Q99440 93 aa14.11□□□□□ -0.15
ARHGEF1-218ENST00000599589 FAM236AA0A1B0GUQ0 79 aa14.11□□□□□ -0.15
ARHGEF1-218ENST00000599589 FAM236BA0A1B0GV22 79 aa14.11□□□□□ -0.15
ARHGEF1-218ENST00000599589 USP9XQ93008 2570 aaPredicted RBP14.1□□□□□ -0.15
ARHGEF1-218ENST00000599589 K7EMT4 169 aa14.1□□□□□ -0.15
ARHGEF1-218ENST00000599589 NRGNQ92686 78 aa14.1□□□□□ -0.15
ARHGEF1-218ENST00000599589 DUX5Q96PT3 197 aa14.1□□□□□ -0.15
ARHGEF1-218ENST00000599589 H3BUX3 64 aa14.1□□□□□ -0.15
ARHGEF1-218ENST00000599589 CITED2Q99967 270 aaPredicted RBP14.1□□□□□ -0.15
ARHGEF1-218ENST00000599589 Q9UF83 564 aa14.1□□□□□ -0.15
ARHGEF1-218ENST00000599589 BBC3Q96PG8 261 aaPredicted RBP14.09□□□□□ -0.15
ARHGEF1-218ENST00000599589 FLNCQ14315 2725 aa14.09□□□□□ -0.15
ARHGEF1-218ENST00000599589 IGLV1-40P01703 118 aa14.09□□□□□ -0.15
ARHGEF1-218ENST00000599589 HTN1P15515 57 aa14.09□□□□□ -0.15
ARHGEF1-218ENST00000599589 TNFRSF18Q9Y5U5 241 aa14.09□□□□□ -0.15
ARHGEF1-218ENST00000599589 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF1-218ENST00000599589 IGKV2-29A2NJV5 120 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF1-218ENST00000599589 A6NDX4 124 aa14.08□□□□□ -0.16
ARHGEF1-218ENST00000599589 SNRPD3P62318 126 aaKnown RBP14.08□□□□□ -0.16
ARHGEF1-218ENST00000599589 DOPEY2Q9Y3R5 2298 aa14.08□□□□□ -0.16
ARHGEF1-218ENST00000599589 SORL1Q92673 2214 aa14.08□□□□□ -0.16
ARHGEF1-218ENST00000599589 SPG11Q96JI7 2443 aa14.07□□□□□ -0.16
ARHGEF1-218ENST00000599589 UBE2D4Q9Y2X8 147 aa14.07□□□□□ -0.16
ARHGEF1-218ENST00000599589 CHCHD7Q9BUK0 85 aa14.07□□□□□ -0.16
ARHGEF1-218ENST00000599589 TMEM126AQ9H061 195 aa14.07□□□□□ -0.16
ARHGEF1-218ENST00000599589 VPS13CQ709C8 3753 aa14.07□□□□□ -0.16
ARHGEF1-218ENST00000599589 KNCNA6PVL3 124 aa14.06□□□□□ -0.16
ARHGEF1-218ENST00000599589 TIMM17BO60830 172 aa14.06□□□□□ -0.16
ARHGEF1-218ENST00000599589 SMCR5Q8TEV8 140 aa14.06□□□□□ -0.16
ARHGEF1-218ENST00000599589 AVPP01185 164 aa14.05□□□□□ -0.16
ARHGEF1-218ENST00000599589 CDKN2A-AS1Q9UH64 79 aa14.05□□□□□ -0.16
ARHGEF1-218ENST00000599589 ZNF843Q8N446 348 aa14.05□□□□□ -0.16
ARHGEF1-218ENST00000599589 K7EQG2 157 aa14.04□□□□□ -0.16
ARHGEF1-218ENST00000599589 ACYP1P07311 99 aa14.04□□□□□ -0.16
ARHGEF1-218ENST00000599589 RBMY1A1P0DJD3 496 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-218ENST00000599589 RBMY1CP0DJD4 496 aa14.04□□□□□ -0.16
ARHGEF1-218ENST00000599589 RBMY1FQ15415 496 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-218ENST00000599589 TMEM95Q3KNT9 176 aa14.04□□□□□ -0.16
ARHGEF1-218ENST00000599589 A0A0U1RRA0 63 aa14.04□□□□□ -0.16
ARHGEF1-218ENST00000599589 USP24Q9UPU5 2620 aa14.03□□□□□ -0.16
ARHGEF1-218ENST00000599589 NACAE9PAV3 2078 aa14.03□□□□□ -0.16
ARHGEF1-218ENST00000599589 NDUFA1O15239 70 aa14.03□□□□□ -0.16
ARHGEF1-218ENST00000599589 LINC00467Q9BRT7 94 aa14.03□□□□□ -0.16
ARHGEF1-218ENST00000599589 EDA2RQ9HAV5 297 aa14.03□□□□□ -0.16
ARHGEF1-218ENST00000599589 PRM2P04554 102 aa14.03□□□□□ -0.16
ARHGEF1-218ENST00000599589 Q6ZSN1 163 aa14.03□□□□□ -0.16
ARHGEF1-218ENST00000599589 LINC01356Q8N9X3 169 aa14.03□□□□□ -0.16
ARHGEF1-218ENST00000599589 IMUPQ9GZP8 106 aa14.03□□□□□ -0.16
ARHGEF1-218ENST00000599589 LINC00308Q8TCZ7 52 aa14.02□□□□□ -0.16
ARHGEF1-218ENST00000599589 ZNF625Q96I27 306 aaPredicted RBP14.02□□□□□ -0.16
ARHGEF1-218ENST00000599589 MYO18BQ8IUG5 2567 aa14.02□□□□□ -0.16
ARHGEF1-218ENST00000599589 IGHV3-38A0A0C4DH36 116 aa14.02□□□□□ -0.17
ARHGEF1-218ENST00000599589 COX7A2LO14548 114 aa14.02□□□□□ -0.17
ARHGEF1-218ENST00000599589 CFHR3Q02985 330 aa14.01□□□□□ -0.17
ARHGEF1-218ENST00000599589 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.01□□□□□ -0.17
ARHGEF1-218ENST00000599589 CIRBPQ14011 172 aaKnown RBP14.01□□□□□ -0.17
ARHGEF1-218ENST00000599589 VPREB3Q9UKI3 123 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms