RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 SULT1A2P50226 295 aa9.35□□□□□ -0.91
EBI3-202ENST00000599339 HNRNPA3P51991 378 aaKnown RBP9.35□□□□□ -0.91
EBI3-202ENST00000599339 MEF2BQ02080 365 aaPredicted RBP9.35□□□□□ -0.91
EBI3-202ENST00000599339 CIRBPQ14011 172 aaKnown RBP9.35□□□□□ -0.91
EBI3-202ENST00000599339 RNF185Q96GF1 192 aa9.35□□□□□ -0.91
EBI3-202ENST00000599339 IGLV4-60A0A075B6I1 120 aa9.34□□□□□ -0.91
EBI3-202ENST00000599339 RAB19A4D1S5 217 aa9.34□□□□□ -0.91
EBI3-202ENST00000599339 PANO1I0J062 215 aa9.34□□□□□ -0.91
EBI3-202ENST00000599339 NTF3P20783 257 aa9.34□□□□□ -0.91
EBI3-202ENST00000599339 CFAP161Q6P656 301 aa9.34□□□□□ -0.91
EBI3-202ENST00000599339 LYZL1Q6UWQ5 148 aa9.34□□□□□ -0.91
EBI3-202ENST00000599339 MED9Q9NWA0 146 aa9.34□□□□□ -0.91
EBI3-202ENST00000599339 Q6ZRU5 148 aa9.33□□□□□ -0.92
EBI3-202ENST00000599339 C9orf62Q8N4C0 152 aa9.32□□□□□ -0.92
EBI3-202ENST00000599339 GFRA4Q9GZZ7 299 aa9.32□□□□□ -0.92
EBI3-202ENST00000599339 A0A087WYN8 130 aa9.31□□□□□ -0.92
EBI3-202ENST00000599339 CTRLP40313 264 aa9.31□□□□□ -0.92
EBI3-202ENST00000599339 TWIST1Q15672 202 aa9.31□□□□□ -0.92
EBI3-202ENST00000599339 TRBV20OR9-2A0A075B6H5 130 aa9.3□□□□□ -0.92
EBI3-202ENST00000599339 BCL2P10415 239 aa9.3□□□□□ -0.92
EBI3-202ENST00000599339 TAGLN2P37802 199 aaKnown RBP9.3□□□□□ -0.92
EBI3-202ENST00000599339 AMMECR1LQ6DCA0 310 aa9.3□□□□□ -0.92
EBI3-202ENST00000599339 SMIM15Q7Z3B0 74 aa9.3□□□□□ -0.92
EBI3-202ENST00000599339 NUDT10Q8NFP7 164 aa9.3□□□□□ -0.92
EBI3-202ENST00000599339 SPACA4Q8TDM5 124 aa9.3□□□□□ -0.92
EBI3-202ENST00000599339 C7orf33Q8WU49 177 aa9.3□□□□□ -0.92
EBI3-202ENST00000599339 NUDT11Q96G61 164 aa9.3□□□□□ -0.92
EBI3-202ENST00000599339 CNFNQ9BYD5 112 aa9.3□□□□□ -0.92
EBI3-202ENST00000599339 IGKV3OR2-268A0A0C4DH90 116 aa9.29□□□□□ -0.92
EBI3-202ENST00000599339 GAGE12HA6NDE8 117 aa9.29□□□□□ -0.92
EBI3-202ENST00000599339 SLPIP03973 132 aa9.29□□□□□ -0.92
EBI3-202ENST00000599339 CHTF8P0CG12 524 aa9.29□□□□□ -0.92
EBI3-202ENST00000599339 RPP21Q9H633 154 aaKnown RBP9.29□□□□□ -0.92
EBI3-202ENST00000599339 PKHD1L1Q86WI1 4243 aa9.28□□□□□ -0.92
EBI3-202ENST00000599339 NCR2O95944 276 aa9.28□□□□□ -0.92
EBI3-202ENST00000599339 RPS10P46783 165 aaKnown RBP9.28□□□□□ -0.92
EBI3-202ENST00000599339 H7C423 109 aa9.27□□□□□ -0.93
EBI3-202ENST00000599339 RNASEKQ6P5S7 137 aaKnown RBP9.27□□□□□ -0.93
EBI3-202ENST00000599339 TEX261Q6UWH6 196 aa9.27□□□□□ -0.93
EBI3-202ENST00000599339 C15orf56Q8N910 161 aa9.27□□□□□ -0.93
EBI3-202ENST00000599339 GATD1Q8NB37 220 aa9.27□□□□□ -0.93
EBI3-202ENST00000599339 PLAC8Q9NZF1 115 aa9.27□□□□□ -0.93
EBI3-202ENST00000599339 TRAV26-2A0A0B4J265 109 aa9.26□□□□□ -0.93
EBI3-202ENST00000599339 NDUFS6O75380 124 aaKnown RBP9.26□□□□□ -0.93
EBI3-202ENST00000599339 APCSP02743 223 aa9.26□□□□□ -0.93
EBI3-202ENST00000599339 COX6A2Q02221 97 aa9.26□□□□□ -0.93
EBI3-202ENST00000599339 CHCHD10Q8WYQ3 142 aaPredicted RBP9.26□□□□□ -0.93
EBI3-202ENST00000599339 RNASE7Q9H1E1 156 aaKnown RBP9.26□□□□□ -0.93
EBI3-202ENST00000599339 MT1HL1P0DM35 61 aa9.25□□□□□ -0.93
EBI3-202ENST00000599339 HIGD2BQ4VC39 106 aa9.25□□□□□ -0.93
EBI3-202ENST00000599339 Q6ZNX1 250 aa9.25□□□□□ -0.93
EBI3-202ENST00000599339 PKIGQ9Y2B9 76 aa9.25□□□□□ -0.93
EBI3-202ENST00000599339 GVQW2A0A096LPI5 108 aaPredicted RBP9.24□□□□□ -0.93
EBI3-202ENST00000599339 PHOX2AO14813 284 aa9.24□□□□□ -0.93
EBI3-202ENST00000599339 ZNF25P17030 456 aaPredicted RBP9.24□□□□□ -0.93
EBI3-202ENST00000599339 MAJINQ3KP22 176 aa9.24□□□□□ -0.93
EBI3-202ENST00000599339 SLC51BQ86UW2 128 aa9.24□□□□□ -0.93
EBI3-202ENST00000599339 OCC1Q8TAD7 63 aa9.24□□□□□ -0.93
EBI3-202ENST00000599339 RPL39LQ96EH5 51 aaKnown RBP9.24□□□□□ -0.93
EBI3-202ENST00000599339 BTF3L4Q96K17 158 aa9.24□□□□□ -0.93
EBI3-202ENST00000599339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.23□□□□□ -0.93
EBI3-202ENST00000599339 IGKV2-24A0A0C4DH68 120 aa9.23□□□□□ -0.93
EBI3-202ENST00000599339 IGKV2-29A2NJV5 120 aaPredicted RBP9.23□□□□□ -0.93
EBI3-202ENST00000599339 SDHAF1A6NFY7 115 aa9.23□□□□□ -0.93
EBI3-202ENST00000599339 FGF6P10767 208 aa9.23□□□□□ -0.93
EBI3-202ENST00000599339 GTSF1Q8WW33 167 aa9.23□□□□□ -0.93
EBI3-202ENST00000599339 TMEM101Q96IK0 257 aa9.23□□□□□ -0.93
EBI3-202ENST00000599339 UBR4Q5T4S7 5183 aa9.23□□□□□ -0.93
EBI3-202ENST00000599339 K7EN84 100 aa9.22□□□□□ -0.93
EBI3-202ENST00000599339 PMCHP20382 165 aa9.22□□□□□ -0.93
EBI3-202ENST00000599339 OR5A1Q8NGJ0 315 aa9.22□□□□□ -0.93
EBI3-202ENST00000599339 PRSS3P2Q8NHM4 247 aa9.22□□□□□ -0.93
EBI3-202ENST00000599339 LINC00474Q9P2X8 69 aa9.22□□□□□ -0.93
EBI3-202ENST00000599339 A8MWL6 223 aa9.21□□□□□ -0.94
EBI3-202ENST00000599339 I3L3M4 83 aa9.21□□□□□ -0.94
EBI3-202ENST00000599339 GATCO43716 136 aaKnown RBP9.21□□□□□ -0.94
EBI3-202ENST00000599339 TCTE3Q8IZS6 198 aa9.21□□□□□ -0.94
EBI3-202ENST00000599339 STPG4Q8N801 248 aa9.21□□□□□ -0.94
EBI3-202ENST00000599339 BORCS7Q96B45 105 aa9.21□□□□□ -0.94
EBI3-202ENST00000599339 FAM210AQ96ND0 272 aa9.21□□□□□ -0.94
EBI3-202ENST00000599339 FOXI1Q12951 378 aa9.2□□□□□ -0.94
EBI3-202ENST00000599339 IGHV1-58A0A0C4DH39 117 aa9.19□□□□□ -0.94
EBI3-202ENST00000599339 TRBV6-5A0A0K0K1A5 114 aa9.19□□□□□ -0.94
EBI3-202ENST00000599339 TMEM250H0YL14 139 aa9.19□□□□□ -0.94
EBI3-202ENST00000599339 XCL1P47992 114 aa9.19□□□□□ -0.94
EBI3-202ENST00000599339 FOXA3P55318 350 aaPredicted RBP9.19□□□□□ -0.94
EBI3-202ENST00000599339 PRR3P79522 188 aaKnown RBP9.19□□□□□ -0.94
EBI3-202ENST00000599339 FAM231DQ6ZW35 169 aa9.19□□□□□ -0.94
EBI3-202ENST00000599339 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
EBI3-202ENST00000599339 A0A096LNI7 61 aa9.18□□□□□ -0.94
EBI3-202ENST00000599339 CCL25O15444 150 aa9.18□□□□□ -0.94
EBI3-202ENST00000599339 SS18Q15532 418 aa9.18□□□□□ -0.94
EBI3-202ENST00000599339 CT83Q5H943 113 aa9.18□□□□□ -0.94
EBI3-202ENST00000599339 LYPD6BQ8NI32 183 aa9.18□□□□□ -0.94
EBI3-202ENST00000599339 MRAP2Q96G30 205 aa9.18□□□□□ -0.94
EBI3-202ENST00000599339 LINC00959A0A1B0GUT2 108 aa9.17□□□□□ -0.94
EBI3-202ENST00000599339 BLOC1S1P78537 153 aa9.17□□□□□ -0.94
EBI3-202ENST00000599339 CARD19Q96LW7 228 aa9.17□□□□□ -0.94
EBI3-202ENST00000599339 FAM231BA6NCW3 169 aa9.16□□□□□ -0.94
EBI3-202ENST00000599339 ZNF561-AS1K7EIQ3 104 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms