RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 AMTP48728 403 aa9.67□□□□□ -0.86
LIG1-208ENST00000595758 GAGE6Q13070 117 aa9.67□□□□□ -0.86
LIG1-208ENST00000595758 ELOBQ15370 118 aa9.67□□□□□ -0.86
LIG1-208ENST00000595758 SVBPQ8N300 66 aa9.67□□□□□ -0.86
LIG1-208ENST00000595758 PPBPP02775 128 aa9.66□□□□□ -0.86
LIG1-208ENST00000595758 POLR2KP53803 58 aaKnown RBP9.66□□□□□ -0.86
LIG1-208ENST00000595758 SUMO2P61956 95 aaKnown RBP9.66□□□□□ -0.86
LIG1-208ENST00000595758 LAGE3Q14657 143 aa9.66□□□□□ -0.86
LIG1-208ENST00000595758 ATRAIDQ6UW56 229 aa9.66□□□□□ -0.86
LIG1-208ENST00000595758 Q6ZRN7 208 aaPredicted RBP9.66□□□□□ -0.86
LIG1-208ENST00000595758 SLC7A5P1Q8MH63 180 aa9.66□□□□□ -0.86
LIG1-208ENST00000595758 Q9HAA7 133 aa9.66□□□□□ -0.86
LIG1-208ENST00000595758 KLK12Q9UKR0 248 aa9.66□□□□□ -0.86
LIG1-208ENST00000595758 TRBV27A0A0K0K1C4 114 aa9.65□□□□□ -0.86
LIG1-208ENST00000595758 D6R8Y8 96 aa9.65□□□□□ -0.86
LIG1-208ENST00000595758 VCYO14598 125 aa9.65□□□□□ -0.86
LIG1-208ENST00000595758 SNAPINO95295 136 aa9.65□□□□□ -0.86
LIG1-208ENST00000595758 TNP2Q05952 138 aa9.65□□□□□ -0.86
LIG1-208ENST00000595758 MPV17L2Q567V2 206 aa9.65□□□□□ -0.86
LIG1-208ENST00000595758 EPPK1P58107 5090 aaKnown RBP9.65□□□□□ -0.87
LIG1-208ENST00000595758 TRBV24-1A0A075B6N3 115 aa9.64□□□□□ -0.87
LIG1-208ENST00000595758 TRAV8-3A0A0A6YYJ7 113 aa9.64□□□□□ -0.87
LIG1-208ENST00000595758 UBE2L6O14933 153 aa9.64□□□□□ -0.87
LIG1-208ENST00000595758 TNFRSF6BO95407 300 aa9.64□□□□□ -0.87
LIG1-208ENST00000595758 TSHBP01222 138 aa9.64□□□□□ -0.87
LIG1-208ENST00000595758 APCSP02743 223 aa9.64□□□□□ -0.87
LIG1-208ENST00000595758 RBX1P62877 108 aa9.64□□□□□ -0.87
LIG1-208ENST00000595758 TMEM136Q6ZRR5 245 aa9.64□□□□□ -0.87
LIG1-208ENST00000595758 ORMDL3Q8N138 153 aa9.64□□□□□ -0.87
LIG1-208ENST00000595758 Q8N976 141 aa9.64□□□□□ -0.87
LIG1-208ENST00000595758 C20orf78Q9BR46 151 aa9.64□□□□□ -0.87
LIG1-208ENST00000595758 UBE2WQ96B02 151 aa9.63□□□□□ -0.87
LIG1-208ENST00000595758 FAT2Q9NYQ8 4349 aa9.63□□□□□ -0.87
LIG1-208ENST00000595758 PHOX2AO14813 284 aa9.62□□□□□ -0.87
LIG1-208ENST00000595758 NPYP01303 97 aa9.62□□□□□ -0.87
LIG1-208ENST00000595758 ANGP03950 147 aaKnown RBP9.62□□□□□ -0.87
LIG1-208ENST00000595758 PRELID3AQ96N28 172 aa9.62□□□□□ -0.87
LIG1-208ENST00000595758 KIR2DL4Q99706 377 aa9.62□□□□□ -0.87
LIG1-208ENST00000595758 TM2D2Q9BX73 214 aa9.62□□□□□ -0.87
LIG1-208ENST00000595758 A0A1B0GUV1 79 aa9.61□□□□□ -0.87
LIG1-208ENST00000595758 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
LIG1-208ENST00000595758 PSCAO43653 123 aa9.61□□□□□ -0.87
LIG1-208ENST00000595758 FCER1GP30273 86 aa9.61□□□□□ -0.87
LIG1-208ENST00000595758 RPL32P62910 135 aaKnown RBP9.61□□□□□ -0.87
LIG1-208ENST00000595758 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.6□□□□□ -0.87
LIG1-208ENST00000595758 IGKV2-29A2NJV5 120 aaPredicted RBP9.6□□□□□ -0.87
LIG1-208ENST00000595758 H7C423 109 aa9.6□□□□□ -0.87
LIG1-208ENST00000595758 CRPP02741 224 aa9.6□□□□□ -0.87
LIG1-208ENST00000595758 ESDP10768 282 aa9.6□□□□□ -0.87
LIG1-208ENST00000595758 Q0VG73 95 aa9.6□□□□□ -0.87
LIG1-208ENST00000595758 LINC00269Q8N2A0 174 aa9.6□□□□□ -0.87
LIG1-208ENST00000595758 RMI2Q96E14 147 aa9.6□□□□□ -0.87
LIG1-208ENST00000595758 SMIM2Q9BVW6 85 aa9.6□□□□□ -0.87
LIG1-208ENST00000595758 LAMTOR2Q9Y2Q5 125 aa9.6□□□□□ -0.87
LIG1-208ENST00000595758 HLA-DQA1P01909 254 aa9.59□□□□□ -0.87
LIG1-208ENST00000595758 COX19Q49B96 90 aa9.59□□□□□ -0.87
LIG1-208ENST00000595758 AMMECR1LQ6DCA0 310 aa9.59□□□□□ -0.87
LIG1-208ENST00000595758 ENHOQ6UWT2 76 aa9.59□□□□□ -0.87
LIG1-208ENST00000595758 C20orf203Q8NBC4 194 aa9.59□□□□□ -0.87
LIG1-208ENST00000595758 GNB1LQ9BYB4 327 aa9.59□□□□□ -0.87
LIG1-208ENST00000595758 IGLV4-60A0A075B6I1 120 aa9.58□□□□□ -0.88
LIG1-208ENST00000595758 IGKV2D-24A0A075B6R9 120 aa9.58□□□□□ -0.88
LIG1-208ENST00000595758 TCAPO15273 167 aa9.58□□□□□ -0.88
LIG1-208ENST00000595758 FGF6P10767 208 aa9.58□□□□□ -0.88
LIG1-208ENST00000595758 RNASEKQ6P5S7 137 aaKnown RBP9.58□□□□□ -0.88
LIG1-208ENST00000595758 PRR34Q9NV39 138 aa9.58□□□□□ -0.88
LIG1-208ENST00000595758 COX11Q9Y6N1 276 aa9.58□□□□□ -0.88
LIG1-208ENST00000595758 TGIF2-C20orf24A0A0A6YYL0 155 aa9.57□□□□□ -0.88
LIG1-208ENST00000595758 EREGO14944 169 aa9.57□□□□□ -0.88
LIG1-208ENST00000595758 MIAQ16674 131 aa9.57□□□□□ -0.88
LIG1-208ENST00000595758 CLPSL2Q6UWE3 100 aa9.57□□□□□ -0.88
LIG1-208ENST00000595758 MAP1LC3AQ9H492 121 aa9.57□□□□□ -0.88
LIG1-208ENST00000595758 HECTD4Q9Y4D8 3996 aa9.56□□□□□ -0.88
LIG1-208ENST00000595758 A0A087WTM6 91 aa9.56□□□□□ -0.88
LIG1-208ENST00000595758 LOC389332A0A1B0GUA5 103 aa9.56□□□□□ -0.88
LIG1-208ENST00000595758 PRSS47A8MTI9 375 aa9.56□□□□□ -0.88
LIG1-208ENST00000595758 MT-ND6P03923 174 aa9.56□□□□□ -0.88
LIG1-208ENST00000595758 REG3AQ06141 175 aa9.56□□□□□ -0.88
LIG1-208ENST00000595758 KIAA1644Q3SXP7 199 aa9.56□□□□□ -0.88
LIG1-208ENST00000595758 TMEM101Q96IK0 257 aa9.56□□□□□ -0.88
LIG1-208ENST00000595758 C1orf43Q9BWL3 253 aa9.56□□□□□ -0.88
LIG1-208ENST00000595758 ZNF25P17030 456 aaPredicted RBP9.55□□□□□ -0.88
LIG1-208ENST00000595758 RAB5AP20339 215 aa9.55□□□□□ -0.88
LIG1-208ENST00000595758 OR5A1Q8NGJ0 315 aa9.55□□□□□ -0.88
LIG1-208ENST00000595758 PKD1P98161 4303 aa9.55□□□□□ -0.88
LIG1-208ENST00000595758 BIRC6Q9NR09 4857 aa9.54□□□□□ -0.88
LIG1-208ENST00000595758 LRCOL1A6NCL2 159 aa9.54□□□□□ -0.88
LIG1-208ENST00000595758 SMAGPQ0VAQ4 97 aa9.54□□□□□ -0.88
LIG1-208ENST00000595758 FABP9Q0Z7S8 132 aa9.54□□□□□ -0.88
LIG1-208ENST00000595758 SPATA12Q7Z6I5 190 aa9.54□□□□□ -0.88
LIG1-208ENST00000595758 MRPL52Q86TS9 123 aaKnown RBP9.54□□□□□ -0.88
LIG1-208ENST00000595758 TMEM18Q96B42 140 aa9.54□□□□□ -0.88
LIG1-208ENST00000595758 MRPL18Q9H0U6 180 aaKnown RBP9.54□□□□□ -0.88
LIG1-208ENST00000595758 DGAT2L7PQ6IED9 249 aa9.53□□□□□ -0.88
LIG1-208ENST00000595758 MAPKAPK5-AS1Q8N8E1 139 aa9.53□□□□□ -0.88
LIG1-208ENST00000595758 Q8N8P6 123 aa9.53□□□□□ -0.88
LIG1-208ENST00000595758 SMCO4Q9NRQ5 59 aa9.53□□□□□ -0.88
LIG1-208ENST00000595758 DNAH11Q96DT5 4516 aa9.53□□□□□ -0.88
LIG1-208ENST00000595758 TRAV8-4A0A0B4J246 113 aa9.52□□□□□ -0.89
LIG1-208ENST00000595758 BAALCQ8WXS3 180 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms