RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 PKIAP61925 76 aa6.13□□□□□ -1.43
NOTCH3-202ENST00000595045 TMEM97Q5BJF2 176 aa6.13□□□□□ -1.43
NOTCH3-202ENST00000595045 C11orf52Q96A22 123 aa6.13□□□□□ -1.43
NOTCH3-202ENST00000595045 A0A087WYN8 130 aa6.12□□□□□ -1.43
NOTCH3-202ENST00000595045 C19orf71A6NCJ1 209 aa6.12□□□□□ -1.43
NOTCH3-202ENST00000595045 P01737 135 aa6.12□□□□□ -1.43
NOTCH3-202ENST00000595045 CACNG7P62955 275 aa6.12□□□□□ -1.43
NOTCH3-202ENST00000595045 REG3AQ06141 175 aa6.12□□□□□ -1.43
NOTCH3-202ENST00000595045 CLLU1Q5K131 121 aa6.12□□□□□ -1.43
NOTCH3-202ENST00000595045 LYZL1Q6UWQ5 148 aa6.12□□□□□ -1.43
NOTCH3-202ENST00000595045 C20orf203Q8NBC4 194 aa6.12□□□□□ -1.43
NOTCH3-202ENST00000595045 SPACA4Q8TDM5 124 aa6.12□□□□□ -1.43
NOTCH3-202ENST00000595045 IGLV4-60A0A075B6I1 120 aa6.11□□□□□ -1.43
NOTCH3-202ENST00000595045 TRAV1-1A0A0B4J248 108 aa6.11□□□□□ -1.43
NOTCH3-202ENST00000595045 TEX46H3BTG2 121 aa6.11□□□□□ -1.43
NOTCH3-202ENST00000595045 H7C1H1 209 aa6.11□□□□□ -1.43
NOTCH3-202ENST00000595045 IFNA1P01562 189 aa6.11□□□□□ -1.43
NOTCH3-202ENST00000595045 NTF3P20783 257 aa6.11□□□□□ -1.43
NOTCH3-202ENST00000595045 SULT1A2P50226 295 aa6.11□□□□□ -1.43
NOTCH3-202ENST00000595045 IQCJQ1A5X6 159 aa6.11□□□□□ -1.43
NOTCH3-202ENST00000595045 RASL11AQ6T310 242 aa6.11□□□□□ -1.43
NOTCH3-202ENST00000595045 NUDT10Q8NFP7 164 aa6.11□□□□□ -1.43
NOTCH3-202ENST00000595045 NUDT11Q96G61 164 aa6.11□□□□□ -1.43
NOTCH3-202ENST00000595045 PLAC8Q9NZF1 115 aa6.11□□□□□ -1.43
NOTCH3-202ENST00000595045 TRBV20OR9-2A0A075B6H5 130 aa6.1□□□□□ -1.43
NOTCH3-202ENST00000595045 KRTAP9-6A0A140TA67 174 aa6.1□□□□□ -1.43
NOTCH3-202ENST00000595045 XKRY2A2RUG3 117 aa6.1□□□□□ -1.43
NOTCH3-202ENST00000595045 MEF2BQ02080 365 aaPredicted RBP6.1□□□□□ -1.43
NOTCH3-202ENST00000595045 EIF5AL1Q6IS14 154 aaKnown RBP6.1□□□□□ -1.43
NOTCH3-202ENST00000595045 CLRN3Q8NCR9 226 aa6.1□□□□□ -1.43
NOTCH3-202ENST00000595045 DPH3Q96FX2 82 aa6.1□□□□□ -1.43
NOTCH3-202ENST00000595045 TMEM243Q9BU79 118 aa6.1□□□□□ -1.43
NOTCH3-202ENST00000595045 IGKV3OR2-268A0A0C4DH90 116 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 A0A0J9YXV3 536 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 hDV102S1A0JD36 115 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 F2Z2F3 143 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 UBE2L6O14933 153 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 PDE6DO43924 150 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 TRGC1P0CF51 173 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 BCL2P10415 239 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 KRTAP10-8P60410 259 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 RAB14P61106 215 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 TWIST1Q15672 202 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 C9orf62Q8N4C0 152 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 RNASE7Q9H1E1 156 aaKnown RBP6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 NIT2Q9NQR4 276 aa6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 TMA7Q9Y2S6 64 aaKnown RBP6.09□□□□□ -1.43
NOTCH3-202ENST00000595045 TRAV26-2A0A0B4J265 109 aa6.08□□□□□ -1.44
NOTCH3-202ENST00000595045 PHOX2AO14813 284 aa6.08□□□□□ -1.44
NOTCH3-202ENST00000595045 AMTP48728 403 aa6.08□□□□□ -1.44
NOTCH3-202ENST00000595045 CTAG1AP78358 180 aa6.08□□□□□ -1.44
NOTCH3-202ENST00000595045 TEX261Q6UWH6 196 aa6.08□□□□□ -1.44
NOTCH3-202ENST00000595045 C15orf56Q8N910 161 aa6.08□□□□□ -1.44
NOTCH3-202ENST00000595045 TRAV8-4A0A0B4J246 113 aa6.07□□□□□ -1.44
NOTCH3-202ENST00000595045 A0A1B0GUV1 79 aa6.07□□□□□ -1.44
NOTCH3-202ENST00000595045 FOXA3P55318 350 aaPredicted RBP6.07□□□□□ -1.44
NOTCH3-202ENST00000595045 COTL1Q14019 142 aa6.07□□□□□ -1.44
NOTCH3-202ENST00000595045 WDR73Q6P4I2 378 aa6.07□□□□□ -1.44
NOTCH3-202ENST00000595045 GATD1Q8NB37 220 aa6.07□□□□□ -1.44
NOTCH3-202ENST00000595045 OCC1Q8TAD7 63 aa6.07□□□□□ -1.44
NOTCH3-202ENST00000595045 SMIM12Q96EX1 92 aa6.07□□□□□ -1.44
NOTCH3-202ENST00000595045 RNF185Q96GF1 192 aa6.07□□□□□ -1.44
NOTCH3-202ENST00000595045 RPP21Q9H633 154 aaKnown RBP6.07□□□□□ -1.44
NOTCH3-202ENST00000595045 BIN3Q9NQY0 253 aa6.07□□□□□ -1.44
NOTCH3-202ENST00000595045 IGHV3-64A0A075B6Q5 118 aa6.06□□□□□ -1.44
NOTCH3-202ENST00000595045 GAGE12HA6NDE8 117 aa6.06□□□□□ -1.44
NOTCH3-202ENST00000595045 K7EN84 100 aa6.06□□□□□ -1.44
NOTCH3-202ENST00000595045 PRR3P79522 188 aaKnown RBP6.06□□□□□ -1.44
NOTCH3-202ENST00000595045 S100A12P80511 92 aa6.06□□□□□ -1.44
NOTCH3-202ENST00000595045 PRSS3P2Q8NHM4 247 aa6.06□□□□□ -1.44
NOTCH3-202ENST00000595045 RPL39LQ96EH5 51 aaKnown RBP6.06□□□□□ -1.44
NOTCH3-202ENST00000595045 AP5S1Q9NUS5 200 aa6.06□□□□□ -1.44
NOTCH3-202ENST00000595045 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.05□□□□□ -1.44
NOTCH3-202ENST00000595045 IGKV2-29A2NJV5 120 aaPredicted RBP6.05□□□□□ -1.44
NOTCH3-202ENST00000595045 CTRLP40313 264 aa6.05□□□□□ -1.44
NOTCH3-202ENST00000595045 CEBPGP53567 150 aa6.05□□□□□ -1.44
NOTCH3-202ENST00000595045 COX6A2Q02221 97 aa6.05□□□□□ -1.44
NOTCH3-202ENST00000595045 SRSF9Q13242 221 aaKnown RBP eCLIP6.05□□□□□ -1.44
NOTCH3-202ENST00000595045 RNASEKQ6P5S7 137 aaKnown RBP6.05□□□□□ -1.44
NOTCH3-202ENST00000595045 C7orf33Q8WU49 177 aa6.05□□□□□ -1.44
NOTCH3-202ENST00000595045 GTSF1Q8WW33 167 aa6.05□□□□□ -1.44
NOTCH3-202ENST00000595045 PGLYRP4Q96LB8 373 aa6.05□□□□□ -1.44
NOTCH3-202ENST00000595045 GATCO43716 136 aaKnown RBP6.04□□□□□ -1.44
NOTCH3-202ENST00000595045 HIGD2BQ4VC39 106 aa6.04□□□□□ -1.44
NOTCH3-202ENST00000595045 AMMECR1LQ6DCA0 310 aa6.04□□□□□ -1.44
NOTCH3-202ENST00000595045 SMIM15Q7Z3B0 74 aa6.04□□□□□ -1.44
NOTCH3-202ENST00000595045 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.03□□□□□ -1.44
NOTCH3-202ENST00000595045 ALKAL2Q6UX46 152 aa6.03□□□□□ -1.44
NOTCH3-202ENST00000595045 COMMD7Q86VX2 200 aa6.03□□□□□ -1.44
NOTCH3-202ENST00000595045 SDHAF1A6NFY7 115 aa6.02□□□□□ -1.45
NOTCH3-202ENST00000595045 APCSP02743 223 aa6.02□□□□□ -1.45
NOTCH3-202ENST00000595045 FGF6P10767 208 aa6.02□□□□□ -1.45
NOTCH3-202ENST00000595045 PMCHP20382 165 aa6.02□□□□□ -1.45
NOTCH3-202ENST00000595045 TAGLN2P37802 199 aaKnown RBP6.02□□□□□ -1.45
NOTCH3-202ENST00000595045 CFAP161Q6P656 301 aa6.02□□□□□ -1.45
NOTCH3-202ENST00000595045 REG3GQ6UW15 175 aa6.02□□□□□ -1.45
NOTCH3-202ENST00000595045 CHCHD10Q8WYQ3 142 aaPredicted RBP6.02□□□□□ -1.45
NOTCH3-202ENST00000595045 CNFNQ9BYD5 112 aa6.02□□□□□ -1.45
NOTCH3-202ENST00000595045 A0A096LNI7 61 aa6.01□□□□□ -1.45
NOTCH3-202ENST00000595045 IGKV2-24A0A0C4DH68 120 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms