RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 A0A0J9YY99 117 aa10.61□□□□□ -0.71
FOXA3-202ENST00000594297 TRBV6-5A0A0K0K1A5 114 aa10.61□□□□□ -0.71
FOXA3-202ENST00000594297 VCYO14598 125 aa10.61□□□□□ -0.71
FOXA3-202ENST00000594297 TCAPO15273 167 aa10.61□□□□□ -0.71
FOXA3-202ENST00000594297 PMCHP20382 165 aa10.61□□□□□ -0.71
FOXA3-202ENST00000594297 SUMO2P61956 95 aaKnown RBP10.61□□□□□ -0.71
FOXA3-202ENST00000594297 LINC00588Q9Y4M8 146 aa10.61□□□□□ -0.71
FOXA3-202ENST00000594297 GAGE12JA6NER3 117 aa10.6□□□□□ -0.71
FOXA3-202ENST00000594297 NUDT3O95989 172 aa10.6□□□□□ -0.71
FOXA3-202ENST00000594297 RAB5BP61020 215 aa10.6□□□□□ -0.71
FOXA3-202ENST00000594297 GAGE1Q13065 139 aa10.6□□□□□ -0.71
FOXA3-202ENST00000594297 GAGE4Q13068 117 aa10.6□□□□□ -0.71
FOXA3-202ENST00000594297 GAGE5Q13069 117 aa10.6□□□□□ -0.71
FOXA3-202ENST00000594297 GAGE13Q4V321 117 aa10.6□□□□□ -0.71
FOXA3-202ENST00000594297 DAZ4Q86SG3 579 aaKnown RBP10.6□□□□□ -0.71
FOXA3-202ENST00000594297 NEXN-AS1Q8NBZ9 246 aa10.6□□□□□ -0.71
FOXA3-202ENST00000594297 PRSS3P2Q8NHM4 247 aa10.6□□□□□ -0.71
FOXA3-202ENST00000594297 RPL39LQ96EH5 51 aaKnown RBP10.6□□□□□ -0.71
FOXA3-202ENST00000594297 DAZ3Q9NR90 486 aaKnown RBP10.6□□□□□ -0.71
FOXA3-202ENST00000594297 VPS13BQ7Z7G8 4022 aa10.6□□□□□ -0.71
FOXA3-202ENST00000594297 NPYP01303 97 aa10.59□□□□□ -0.71
FOXA3-202ENST00000594297 TMEM97Q5BJF2 176 aa10.59□□□□□ -0.71
FOXA3-202ENST00000594297 NRACQ8N912 160 aa10.59□□□□□ -0.71
FOXA3-202ENST00000594297 KIR2DL4Q99706 377 aa10.59□□□□□ -0.71
FOXA3-202ENST00000594297 NXT2Q9NPJ8 142 aaKnown RBP10.59□□□□□ -0.71
FOXA3-202ENST00000594297 SDHAF1A6NFY7 115 aa10.58□□□□□ -0.72
FOXA3-202ENST00000594297 CCL18P55774 89 aa10.58□□□□□ -0.72
FOXA3-202ENST00000594297 VSIG2Q96IQ7 327 aa10.58□□□□□ -0.72
FOXA3-202ENST00000594297 LOC389332A0A1B0GUA5 103 aa10.57□□□□□ -0.72
FOXA3-202ENST00000594297 I3L3M4 83 aa10.57□□□□□ -0.72
FOXA3-202ENST00000594297 RPL32P62910 135 aaKnown RBP10.57□□□□□ -0.72
FOXA3-202ENST00000594297 Q5VSD8 79 aa10.57□□□□□ -0.72
FOXA3-202ENST00000594297 NEGR1Q7Z3B1 354 aa10.57□□□□□ -0.72
FOXA3-202ENST00000594297 BAGE3Q86Y29 109 aa10.57□□□□□ -0.72
FOXA3-202ENST00000594297 ATP6V0E2Q8NHE4 81 aa10.57□□□□□ -0.72
FOXA3-202ENST00000594297 PRSS47A8MTI9 375 aa10.56□□□□□ -0.72
FOXA3-202ENST00000594297 K7EMI3 77 aa10.56□□□□□ -0.72
FOXA3-202ENST00000594297 BTF3P20290 206 aaKnown RBP10.56□□□□□ -0.72
FOXA3-202ENST00000594297 G0S2P27469 103 aa10.56□□□□□ -0.72
FOXA3-202ENST00000594297 FCER1GP30273 86 aa10.56□□□□□ -0.72
FOXA3-202ENST00000594297 UBE2D3P61077 147 aa10.56□□□□□ -0.72
FOXA3-202ENST00000594297 UBE2D2P62837 147 aa10.56□□□□□ -0.72
FOXA3-202ENST00000594297 COTL1Q14019 142 aa10.56□□□□□ -0.72
FOXA3-202ENST00000594297 FA2HQ7L5A8 372 aa10.56□□□□□ -0.72
FOXA3-202ENST00000594297 TMEM70Q9BUB7 260 aa10.56□□□□□ -0.72
FOXA3-202ENST00000594297 SMIM2Q9BVW6 85 aa10.56□□□□□ -0.72
FOXA3-202ENST00000594297 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
FOXA3-202ENST00000594297 LOC100131303A0A0U1RQF7 123 aa10.55□□□□□ -0.72
FOXA3-202ENST00000594297 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
FOXA3-202ENST00000594297 POLR2KP53803 58 aaKnown RBP10.55□□□□□ -0.72
FOXA3-202ENST00000594297 Q0VG73 95 aa10.55□□□□□ -0.72
FOXA3-202ENST00000594297 TTC32Q5I0X7 151 aa10.55□□□□□ -0.72
FOXA3-202ENST00000594297 Q8N8P6 123 aa10.55□□□□□ -0.72
FOXA3-202ENST00000594297 C18orf32Q8TCD1 76 aa10.55□□□□□ -0.72
FOXA3-202ENST00000594297 Q9H8V8 135 aa10.54□□□□□ -0.72
FOXA3-202ENST00000594297 HIST1H2BKO60814 126 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 S100A6P06703 90 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 HIST1H2BJP06899 126 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 HIST1H2BOP23527 126 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 HIST1H2BBP33778 126 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 FUSP35637 526 aaKnown RBP eCLIP10.53□□□□□ -0.72
FOXA3-202ENST00000594297 XGP55808 180 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 HIST1H2BDP58876 126 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 HIST1H2BCP62807 126 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 HIST2H2BEQ16778 126 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.53□□□□□ -0.72
FOXA3-202ENST00000594297 HIST1H2BHQ93079 126 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 HIST1H2BNQ99877 126 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 HIST1H2BMQ99879 126 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 GTSF1LQ9H1H1 148 aa10.53□□□□□ -0.72
FOXA3-202ENST00000594297 A0A096LPF7 62 aa10.52□□□□□ -0.73
FOXA3-202ENST00000594297 LINC00614P0C842 121 aa10.52□□□□□ -0.73
FOXA3-202ENST00000594297 IFI27P40305 119 aaPredicted RBP10.52□□□□□ -0.73
FOXA3-202ENST00000594297 SMAGPQ0VAQ4 97 aa10.52□□□□□ -0.73
FOXA3-202ENST00000594297 ORMDL2Q53FV1 153 aa10.52□□□□□ -0.73
FOXA3-202ENST00000594297 TMEM18Q96B42 140 aa10.52□□□□□ -0.73
FOXA3-202ENST00000594297 CHCHD1Q96BP2 118 aaKnown RBP10.52□□□□□ -0.73
FOXA3-202ENST00000594297 Q9UF83 564 aa10.52□□□□□ -0.73
FOXA3-202ENST00000594297 TRBV25-1A0A075B6N4 114 aa10.51□□□□□ -0.73
FOXA3-202ENST00000594297 IGHV1-24A0A0C4DH33 117 aa10.51□□□□□ -0.73
FOXA3-202ENST00000594297 IGHV3-38A0A0C4DH36 116 aa10.51□□□□□ -0.73
FOXA3-202ENST00000594297 LAGE3Q14657 143 aa10.51□□□□□ -0.73
FOXA3-202ENST00000594297 IQCJQ1A5X6 159 aa10.51□□□□□ -0.73
FOXA3-202ENST00000594297 RNASEKQ6P5S7 137 aaKnown RBP10.51□□□□□ -0.73
FOXA3-202ENST00000594297 NIT1Q86X76 327 aa10.51□□□□□ -0.73
FOXA3-202ENST00000594297 AP5S1Q9NUS5 200 aa10.51□□□□□ -0.73
FOXA3-202ENST00000594297 LINC01549A6NIU2 74 aa10.5□□□□□ -0.73
FOXA3-202ENST00000594297 LINC00694P0DN24 101 aa10.5□□□□□ -0.73
FOXA3-202ENST00000594297 AMTP48728 403 aa10.5□□□□□ -0.73
FOXA3-202ENST00000594297 TIRAPP58753 221 aa10.5□□□□□ -0.73
FOXA3-202ENST00000594297 PKIAP61925 76 aa10.5□□□□□ -0.73
FOXA3-202ENST00000594297 TRAV8-6A0A0B4J262 113 aa10.49□□□□□ -0.73
FOXA3-202ENST00000594297 UBE2L6O14933 153 aa10.49□□□□□ -0.73
FOXA3-202ENST00000594297 HSBP1O75506 76 aa10.49□□□□□ -0.73
FOXA3-202ENST00000594297 NDUFA6P56556 154 aa10.49□□□□□ -0.73
FOXA3-202ENST00000594297 FLG2Q5D862 2391 aaPredicted RBP10.48□□□□□ -0.73
FOXA3-202ENST00000594297 TRBV6-8A0A0A6YYG3 113 aa10.48□□□□□ -0.73
FOXA3-202ENST00000594297 LYPD5Q6UWN5 251 aa10.48□□□□□ -0.73
FOXA3-202ENST00000594297 Q6ZRN7 208 aaPredicted RBP10.48□□□□□ -0.73
FOXA3-202ENST00000594297 UPK3BQ9BT76 320 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms