RNA–Protein interactions for RNA: ENST00000593708.1

USF2-204, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-204ENST00000593708 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.63□□□□□ -0.23
USF2-204ENST00000593708 TRAV1-1A0A0B4J248 108 aa13.63□□□□□ -0.23
USF2-204ENST00000593708 GNG4P50150 75 aa13.63□□□□□ -0.23
USF2-204ENST00000593708 RNF185Q96GF1 192 aa13.63□□□□□ -0.23
USF2-204ENST00000593708 RNF213Q63HN8 5207 aa13.62□□□□□ -0.23
USF2-204ENST00000593708 F2Z2F3 143 aa13.62□□□□□ -0.23
USF2-204ENST00000593708 NTF3P20783 257 aa13.62□□□□□ -0.23
USF2-204ENST00000593708 AMTP48728 403 aa13.62□□□□□ -0.23
USF2-204ENST00000593708 DPH3Q96FX2 82 aa13.62□□□□□ -0.23
USF2-204ENST00000593708 DPH3P1Q9H4G8 78 aa13.62□□□□□ -0.23
USF2-204ENST00000593708 PLAC8Q9NZF1 115 aa13.62□□□□□ -0.23
USF2-204ENST00000593708 GAGE12HA6NDE8 117 aa13.61□□□□□ -0.23
USF2-204ENST00000593708 PHOX2AO14813 284 aa13.61□□□□□ -0.23
USF2-204ENST00000593708 IFNA1P01562 189 aa13.61□□□□□ -0.23
USF2-204ENST00000593708 TRGC1P0CF51 173 aa13.61□□□□□ -0.23
USF2-204ENST00000593708 CTRLP40313 264 aa13.61□□□□□ -0.23
USF2-204ENST00000593708 SULT1A2P50226 295 aa13.61□□□□□ -0.23
USF2-204ENST00000593708 UBE2L6O14933 153 aa13.6□□□□□ -0.23
USF2-204ENST00000593708 COTL1Q14019 142 aa13.6□□□□□ -0.23
USF2-204ENST00000593708 SMIM12Q96EX1 92 aa13.6□□□□□ -0.23
USF2-204ENST00000593708 TRAV26-2A0A0B4J265 109 aa13.59□□□□□ -0.23
USF2-204ENST00000593708 IGKV3OR2-268A0A0C4DH90 116 aa13.59□□□□□ -0.23
USF2-204ENST00000593708 MEF2BQ02080 365 aaPredicted RBP13.59□□□□□ -0.23
USF2-204ENST00000593708 COX6A2Q02221 97 aa13.59□□□□□ -0.23
USF2-204ENST00000593708 WDR73Q6P4I2 378 aa13.59□□□□□ -0.23
USF2-204ENST00000593708 C9orf62Q8N4C0 152 aa13.59□□□□□ -0.23
USF2-204ENST00000593708 XKRY2A2RUG3 117 aa13.58□□□□□ -0.24
USF2-204ENST00000593708 EIF5AP63241 154 aaKnown RBP13.58□□□□□ -0.24
USF2-204ENST00000593708 HIGD2BQ4VC39 106 aa13.58□□□□□ -0.24
USF2-204ENST00000593708 GATD1Q8NB37 220 aa13.58□□□□□ -0.24
USF2-204ENST00000593708 Q6ZNX1 250 aa13.57□□□□□ -0.24
USF2-204ENST00000593708 PRSS3P2Q8NHM4 247 aa13.57□□□□□ -0.24
USF2-204ENST00000593708 CNFNQ9BYD5 112 aa13.57□□□□□ -0.24
USF2-204ENST00000593708 NUDT10Q8NFP7 164 aa13.56□□□□□ -0.24
USF2-204ENST00000593708 RPL39LQ96EH5 51 aaKnown RBP13.56□□□□□ -0.24
USF2-204ENST00000593708 NUDT11Q96G61 164 aa13.56□□□□□ -0.24
USF2-204ENST00000593708 MED9Q9NWA0 146 aa13.56□□□□□ -0.24
USF2-204ENST00000593708 PDE6DO43924 150 aa13.55□□□□□ -0.24
USF2-204ENST00000593708 RPS10P46783 165 aaKnown RBP13.55□□□□□ -0.24
USF2-204ENST00000593708 ODF1Q14990 250 aa13.55□□□□□ -0.24
USF2-204ENST00000593708 TWIST1Q15672 202 aa13.55□□□□□ -0.24
USF2-204ENST00000593708 CHCHD10Q8WYQ3 142 aaPredicted RBP13.55□□□□□ -0.24
USF2-204ENST00000593708 IGKV2-24A0A0C4DH68 120 aa13.54□□□□□ -0.24
USF2-204ENST00000593708 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.53□□□□□ -0.24
USF2-204ENST00000593708 GVQW2A0A096LPI5 108 aaPredicted RBP13.53□□□□□ -0.24
USF2-204ENST00000593708 IGKV2-29A2NJV5 120 aaPredicted RBP13.53□□□□□ -0.24
USF2-204ENST00000593708 K7EN84 100 aa13.53□□□□□ -0.24
USF2-204ENST00000593708 BCL2P10415 239 aa13.53□□□□□ -0.24
USF2-204ENST00000593708 FOXA3P55318 350 aaPredicted RBP13.53□□□□□ -0.24
USF2-204ENST00000593708 PRR3P79522 188 aaKnown RBP13.53□□□□□ -0.24
USF2-204ENST00000593708 MAJINQ3KP22 176 aa13.53□□□□□ -0.24
USF2-204ENST00000593708 CFAP161Q6P656 301 aa13.53□□□□□ -0.24
USF2-204ENST00000593708 C7orf33Q8WU49 177 aa13.53□□□□□ -0.24
USF2-204ENST00000593708 NDUFS6O75380 124 aaKnown RBP13.52□□□□□ -0.25
USF2-204ENST00000593708 RNASE7Q9H1E1 156 aaKnown RBP13.52□□□□□ -0.25
USF2-204ENST00000593708 RPP21Q9H633 154 aaKnown RBP13.52□□□□□ -0.25
USF2-204ENST00000593708 GTSF1Q8WW33 167 aa13.51□□□□□ -0.25
USF2-204ENST00000593708 BIN3Q9NQY0 253 aa13.51□□□□□ -0.25
USF2-204ENST00000593708 A0A096LNI7 61 aa13.5□□□□□ -0.25
USF2-204ENST00000593708 TEX46H3BTG2 121 aa13.5□□□□□ -0.25
USF2-204ENST00000593708 FOXI1Q12951 378 aa13.5□□□□□ -0.25
USF2-204ENST00000593708 AMMECR1LQ6DCA0 310 aa13.5□□□□□ -0.25
USF2-204ENST00000593708 FGF6P10767 208 aa13.49□□□□□ -0.25
USF2-204ENST00000593708 RNASEKQ6P5S7 137 aaKnown RBP13.49□□□□□ -0.25
USF2-204ENST00000593708 STPG4Q8N801 248 aa13.49□□□□□ -0.25
USF2-204ENST00000593708 LYPD6BQ8NI32 183 aa13.49□□□□□ -0.25
USF2-204ENST00000593708 LINC01600Q96MT4 127 aa13.49□□□□□ -0.25
USF2-204ENST00000593708 NCR2O95944 276 aa13.48□□□□□ -0.25
USF2-204ENST00000593708 OCC1Q8TAD7 63 aa13.48□□□□□ -0.25
USF2-204ENST00000593708 SDHAF1A6NFY7 115 aa13.47□□□□□ -0.25
USF2-204ENST00000593708 APCSP02743 223 aa13.47□□□□□ -0.25
USF2-204ENST00000593708 EIF5AL1Q6IS14 154 aaKnown RBP13.47□□□□□ -0.25
USF2-204ENST00000593708 LINC00526Q96FQ7 95 aa13.47□□□□□ -0.25
USF2-204ENST00000593708 FAM231BA6NCW3 169 aa13.46□□□□□ -0.25
USF2-204ENST00000593708 XCL1P47992 114 aa13.46□□□□□ -0.25
USF2-204ENST00000593708 H7C423 109 aa13.45□□□□□ -0.26
USF2-204ENST00000593708 GAS8-AS1O95177 125 aa13.45□□□□□ -0.26
USF2-204ENST00000593708 OR5A1Q8NGJ0 315 aa13.43□□□□□ -0.26
USF2-204ENST00000593708 TSHBP01222 138 aa13.42□□□□□ -0.26
USF2-204ENST00000593708 ZNF25P17030 456 aaPredicted RBP13.42□□□□□ -0.26
USF2-204ENST00000593708 LINC00959A0A1B0GUT2 108 aa13.41□□□□□ -0.26
USF2-204ENST00000593708 I3L3M4 83 aa13.41□□□□□ -0.26
USF2-204ENST00000593708 CCL25O15444 150 aa13.41□□□□□ -0.26
USF2-204ENST00000593708 A0A0J9YXV3 536 aa13.4□□□□□ -0.26
USF2-204ENST00000593708 TRBV6-5A0A0K0K1A5 114 aa13.4□□□□□ -0.26
USF2-204ENST00000593708 ESDP10768 282 aa13.4□□□□□ -0.26
USF2-204ENST00000593708 TEX261Q6UWH6 196 aa13.4□□□□□ -0.26
USF2-204ENST00000593708 SMIM15Q7Z3B0 74 aa13.4□□□□□ -0.26
USF2-204ENST00000593708 TMEM242Q9NWH2 141 aa13.4□□□□□ -0.26
USF2-204ENST00000593708 CARD19Q96LW7 228 aa13.39□□□□□ -0.27
USF2-204ENST00000593708 IGHV1-58A0A0C4DH39 117 aa13.38□□□□□ -0.27
USF2-204ENST00000593708 PMCHP20382 165 aa13.38□□□□□ -0.27
USF2-204ENST00000593708 TAGLN2P37802 199 aaKnown RBP13.38□□□□□ -0.27
USF2-204ENST00000593708 KRTAP10-8P60410 259 aa13.38□□□□□ -0.27
USF2-204ENST00000593708 SLC51BQ86UW2 128 aa13.38□□□□□ -0.27
USF2-204ENST00000593708 GATCO43716 136 aaKnown RBP13.37□□□□□ -0.27
USF2-204ENST00000593708 TMEM101Q96IK0 257 aa13.37□□□□□ -0.27
USF2-204ENST00000593708 BTF3L4Q96K17 158 aa13.37□□□□□ -0.27
USF2-204ENST00000593708 LINC00474Q9P2X8 69 aa13.37□□□□□ -0.27
USF2-204ENST00000593708 SRSF9Q13242 221 aaKnown RBP eCLIP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms