RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 C2orf88Q9BSF0 95 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 TRBV10-1A0A0K0K1A3 114 aa8.53□□□□□ -1.04
NPC1-214ENST00000593280 SMIM9A6NGZ8 99 aa8.53□□□□□ -1.04
NPC1-214ENST00000593280 CIDEAO60543 219 aa8.53□□□□□ -1.04
NPC1-214ENST00000593280 EMP1P54849 157 aa8.53□□□□□ -1.04
NPC1-214ENST00000593280 TRBV7-3A0A075B6L6 115 aa8.52□□□□□ -1.05
NPC1-214ENST00000593280 FGF6P10767 208 aa8.52□□□□□ -1.05
NPC1-214ENST00000593280 RPL36AP83881 106 aaKnown RBP8.52□□□□□ -1.05
NPC1-214ENST00000593280 COTL1Q14019 142 aa8.52□□□□□ -1.05
NPC1-214ENST00000593280 BATFQ16520 125 aa8.52□□□□□ -1.05
NPC1-214ENST00000593280 SHISA2Q6UWI4 295 aa8.52□□□□□ -1.05
NPC1-214ENST00000593280 PHLDA1Q8WV24 401 aaPredicted RBP8.52□□□□□ -1.05
NPC1-214ENST00000593280 RPL36ALQ969Q0 106 aaKnown RBP8.52□□□□□ -1.05
NPC1-214ENST00000593280 X6R8D5 127 aa8.52□□□□□ -1.05
NPC1-214ENST00000593280 IGHV3-38A0A0C4DH36 116 aa8.51□□□□□ -1.05
NPC1-214ENST00000593280 C12orf54Q6X4T0 127 aa8.51□□□□□ -1.05
NPC1-214ENST00000593280 BOD1L2Q8IYS8 172 aa8.51□□□□□ -1.05
NPC1-214ENST00000593280 SLC25A29Q8N8R3 303 aa8.51□□□□□ -1.05
NPC1-214ENST00000593280 ZNRF2Q8NHG8 242 aa8.51□□□□□ -1.05
NPC1-214ENST00000593280 CST9LQ9H4G1 147 aa8.51□□□□□ -1.05
NPC1-214ENST00000593280 TRGV4A0A0C4DH28 118 aa8.51□□□□□ -1.05
NPC1-214ENST00000593280 DEFB135Q30KP9 77 aa8.51□□□□□ -1.05
NPC1-214ENST00000593280 PAPPA-AS1Q5QFB9 102 aa8.51□□□□□ -1.05
NPC1-214ENST00000593280 PRIMA1Q86XR5 153 aa8.51□□□□□ -1.05
NPC1-214ENST00000593280 CHCHD7Q9BUK0 85 aa8.51□□□□□ -1.05
NPC1-214ENST00000593280 IGKV2D-26A0A0A0MRZ7 120 aa8.5□□□□□ -1.05
NPC1-214ENST00000593280 DLEU1O43261 78 aa8.5□□□□□ -1.05
NPC1-214ENST00000593280 PCP2Q8IVA1 136 aa8.5□□□□□ -1.05
NPC1-214ENST00000593280 PYGO1Q9Y3Y4 419 aa8.5□□□□□ -1.05
NPC1-214ENST00000593280 IGLV4-69A0A075B6H9 119 aa8.49□□□□□ -1.05
NPC1-214ENST00000593280 IGLV4-3A0A075B6K6 122 aa8.49□□□□□ -1.05
NPC1-214ENST00000593280 HINT1P49773 126 aaPredicted RBP8.49□□□□□ -1.05
NPC1-214ENST00000593280 TMEM97Q5BJF2 176 aa8.49□□□□□ -1.05
NPC1-214ENST00000593280 C2orf91Q6ZV80 131 aa8.49□□□□□ -1.05
NPC1-214ENST00000593280 DAZ4Q86SG3 579 aaKnown RBP8.49□□□□□ -1.05
NPC1-214ENST00000593280 OPRPNQ99935 248 aaPredicted RBP8.49□□□□□ -1.05
NPC1-214ENST00000593280 DAZ3Q9NR90 486 aaKnown RBP8.49□□□□□ -1.05
NPC1-214ENST00000593280 FBN3Q75N90 2809 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 TRBV6-4A0A1B0GX49 114 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 GAGE12JA6NER3 117 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 NPSP0C0P6 89 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 IGHV4-30-4P0DP06 118 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 DEFB130BP0DP73 79 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 DEFB130AP0DP74 79 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 UBE2D3P61077 147 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 UBE2D2P62837 147 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 GAGE1Q13065 139 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 GAGE4Q13068 117 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 GAGE5Q13069 117 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 GAGE13Q4V321 117 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 MDFIQ99750 246 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
NPC1-214ENST00000593280 ZMAT5Q9UDW3 170 aaKnown RBP8.48□□□□□ -1.05
NPC1-214ENST00000593280 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.47□□□□□ -1.05
NPC1-214ENST00000593280 IGKV2-29A2NJV5 120 aaPredicted RBP8.47□□□□□ -1.05
NPC1-214ENST00000593280 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
NPC1-214ENST00000593280 SIVA1O15304 175 aa8.47□□□□□ -1.05
NPC1-214ENST00000593280 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
NPC1-214ENST00000593280 OR11H2Q8NH07 326 aa8.47□□□□□ -1.05
NPC1-214ENST00000593280 VCX2Q9H322 139 aa8.47□□□□□ -1.05
NPC1-214ENST00000593280 FHL2Q14192 279 aa8.47□□□□□ -1.05
NPC1-214ENST00000593280 COL5A1-AS1Q5SY13 56 aa8.47□□□□□ -1.05
NPC1-214ENST00000593280 PRADC1Q9BSG0 188 aa8.47□□□□□ -1.05
NPC1-214ENST00000593280 UBE2D4Q9Y2X8 147 aa8.47□□□□□ -1.05
NPC1-214ENST00000593280 DNHD1Q96M86 4753 aa8.46□□□□□ -1.05
NPC1-214ENST00000593280 A0A1B0GV90 55 aa8.46□□□□□ -1.06
NPC1-214ENST00000593280 LYRM9A8MSI8 78 aa8.46□□□□□ -1.06
NPC1-214ENST00000593280 CRYBA4P53673 196 aa8.46□□□□□ -1.06
NPC1-214ENST00000593280 HERVK_113P61574 105 aa8.46□□□□□ -1.06
NPC1-214ENST00000593280 MPV17L2Q567V2 206 aa8.46□□□□□ -1.06
NPC1-214ENST00000593280 CEMP1Q6PRD7 247 aaPredicted RBP8.46□□□□□ -1.06
NPC1-214ENST00000593280 STAB1Q9NY15 2570 aa8.46□□□□□ -1.06
NPC1-214ENST00000593280 TRAV8-6A0A0B4J262 113 aa8.45□□□□□ -1.06
NPC1-214ENST00000593280 IGHV4-28A0A0C4DH34 117 aa8.45□□□□□ -1.06
NPC1-214ENST00000593280 LOC100131303A0A0U1RQF7 123 aa8.45□□□□□ -1.06
NPC1-214ENST00000593280 E9PLD3 99 aa8.45□□□□□ -1.06
NPC1-214ENST00000593280 KRTAP10-11P60412 298 aa8.45□□□□□ -1.06
NPC1-214ENST00000593280 FAM222AQ5U5X8 452 aa8.45□□□□□ -1.06
NPC1-214ENST00000593280 NFE4Q86UQ8 179 aa8.45□□□□□ -1.06
NPC1-214ENST00000593280 AMELXQ99217 191 aa8.45□□□□□ -1.06
NPC1-214ENST00000593280 CHAC1Q9BUX1 264 aa8.45□□□□□ -1.06
NPC1-214ENST00000593280 TTTY13Q9BZ97 58 aa8.45□□□□□ -1.06
NPC1-214ENST00000593280 MIFP14174 115 aa8.44□□□□□ -1.06
NPC1-214ENST00000593280 EGFEM1PQ0D2K5 195 aa8.44□□□□□ -1.06
NPC1-214ENST00000593280 TMEM170BQ5T4T1 132 aa8.44□□□□□ -1.06
NPC1-214ENST00000593280 FAM104AQ969W3 186 aa8.44□□□□□ -1.06
NPC1-214ENST00000593280 RNF183Q96D59 192 aa8.44□□□□□ -1.06
NPC1-214ENST00000593280 TIMM21Q9BVV7 248 aa8.44□□□□□ -1.06
NPC1-214ENST00000593280 PKD1L1Q8TDX9 2849 aa8.44□□□□□ -1.06
NPC1-214ENST00000593280 BVES-AS1Q5T3Y7 98 aa8.43□□□□□ -1.06
NPC1-214ENST00000593280 Q6ZUT4 128 aa8.43□□□□□ -1.06
NPC1-214ENST00000593280 GTSF1LQ9H1H1 148 aa8.43□□□□□ -1.06
NPC1-214ENST00000593280 A0A0J9YXV3 536 aa8.43□□□□□ -1.06
NPC1-214ENST00000593280 DEFB4AO15263 64 aa8.43□□□□□ -1.06
NPC1-214ENST00000593280 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
NPC1-214ENST00000593280 HSD52Q0P140 79 aa8.43□□□□□ -1.06
NPC1-214ENST00000593280 SMAGPQ0VAQ4 97 aa8.43□□□□□ -1.06
NPC1-214ENST00000593280 RNASE13Q5GAN3 156 aaKnown RBP8.43□□□□□ -1.06
NPC1-214ENST00000593280 DGAT2L7PQ6IED9 249 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms