RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ATP6V0E2Q8NHE4 81 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 PFN4Q8NHR9 129 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 SMCR5Q8TEV8 140 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 LINC00052Q96N35 136 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 LYSTQ99698 3801 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 LINC00467Q9BRT7 94 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 TAS2R4Q9NYW5 299 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 TPRKBQ9Y3C4 175 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 CSMD3Q7Z407 3707 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 NUP210LQ5VU65 1888 aa2.96□□□□□ -1.93
SMAD4-216ENST00000593223 HECTD4Q9Y4D8 3996 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.96□□□□□ -1.94
SMAD4-216ENST00000593223 IGHV3-64DA0A0J9YX35 117 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 LOC107986453A0A1B0GWG9 222 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 A8MWP4 228 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 OOSP1A8MZH6 123 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 ZNF736B4DX44 427 aaPredicted RBP2.96□□□□□ -1.94
SMAD4-216ENST00000593223 SDCBPO00560 298 aaPredicted RBP2.96□□□□□ -1.94
SMAD4-216ENST00000593223 SSSCA1O60232 199 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 PITX3O75364 302 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 MSMBP08118 114 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 CXCL8P10145 99 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 LINC00315P59091 139 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 PCBD1P61457 104 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 NPC2P61916 151 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 BLCAPP62952 87 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 KISS1Q15726 138 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.96□□□□□ -1.94
SMAD4-216ENST00000593223 CIRBP-AS1Q8TBR5 109 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 REG4Q9BYZ8 158 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 SMDT1Q9H4I9 107 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 NHP2Q9NX24 153 aaKnown RBP2.96□□□□□ -1.94
SMAD4-216ENST00000593223 TRAPPC1Q9Y5R8 145 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 TRPM6Q9BX84 2022 aa2.96□□□□□ -1.94
SMAD4-216ENST00000593223 STAB2Q8WWQ8 2551 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 IGKV2-28A0A075B6P5 120 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 A0A0D9SFI3 127 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 A6NED7 52 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 F8W1H4 67 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 LECT2O14960 151 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 LYRM1O43325 122 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 EDF1O60869 148 aaKnown RBP2.95□□□□□ -1.94
SMAD4-216ENST00000593223 LY6HO94772 140 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 NDUFB6O95139 128 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 IGKV2D-28P01615 120 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 ZNF705BP0CI00 300 aaPredicted RBP2.95□□□□□ -1.94
SMAD4-216ENST00000593223 CD24P25063 80 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 FUSP35637 526 aaKnown RBP eCLIP2.95□□□□□ -1.94
SMAD4-216ENST00000593223 SNCAP37840 140 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 ASIPP42127 132 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 DYNLT1P63172 113 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 SYCNQ0VAF6 134 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 KHDC3LQ587J8 217 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 C12orf73Q69YU5 71 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 DPPA3Q6W0C5 159 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 SOSTDC1Q6X4U4 206 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 ATP11AUNQ6ZP68 121 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 LYZL2Q7Z4W2 148 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 CCL4L1Q8NHW4 92 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 LINC01560Q8TB33 94 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 C10orf82Q8WW14 230 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 S100ZQ8WXG8 99 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 POP5Q969H6 163 aaKnown RBP2.95□□□□□ -1.94
SMAD4-216ENST00000593223 TTTY13Q9BZ97 58 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 NPVFQ9HCQ7 196 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 SMCO4Q9NRQ5 59 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 SCN1AP35498 2009 aa2.95□□□□□ -1.94
SMAD4-216ENST00000593223 TET2Q6N021 2002 aaPredicted RBP2.95□□□□□ -1.94
SMAD4-216ENST00000593223 IGHV3-73A0A0B4J1V6 119 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 C11orf94C9JXX5 98 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 H3BMM0 161 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 CREBL2O60519 120 aaPredicted RBP2.94□□□□□ -1.94
SMAD4-216ENST00000593223 SNCGO76070 127 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 IGKV1D-33P01593 117 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 IGKV1-33P01594 117 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 GYPAP02724 150 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 MT-ATP8P03928 68 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 COX6A1P12074 109 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 COX7CP15954 63 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 FOXF1Q12946 379 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 ZNF660Q6AZW8 331 aaPredicted RBP2.94□□□□□ -1.94
SMAD4-216ENST00000593223 DYNAPQ8N1N2 210 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 MIR7-3HGQ8N6C7 128 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 OR2T35Q8NGX2 323 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 LSM10Q969L4 123 aaKnown RBP2.94□□□□□ -1.94
SMAD4-216ENST00000593223 UBE2WQ96B02 151 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 MRPS24Q96EL2 167 aaKnown RBP2.94□□□□□ -1.94
SMAD4-216ENST00000593223 HYLS1Q96M11 299 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 FRAS1Q86XX4 4008 aa2.94□□□□□ -1.94
SMAD4-216ENST00000593223 EML6Q6ZMW3 1958 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 IGLV3-9A0A075B6K5 115 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 A0A096LNJ9 63 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 MUC21A0A0G2JKD1 596 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 COLCA2A8K830 154 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 K7EP34 96 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 PIN1P1O15428 100 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 APOC3P02656 99 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 TRGV3P03979 118 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 CKS2P33552 79 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 ATP5EP56381 51 aaPredicted RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms