RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 DPH3Q96FX2 82 aa11.55□□□□□ -0.56
CIRBP-243ENST00000593128 GFRA4Q9GZZ7 299 aa11.55□□□□□ -0.56
CIRBP-243ENST00000593128 PKHD1L1Q86WI1 4243 aa11.54□□□□□ -0.56
CIRBP-243ENST00000593128 LRP1Q07954 4544 aaKnown RBP11.54□□□□□ -0.56
CIRBP-243ENST00000593128 COTL1Q14019 142 aa11.54□□□□□ -0.56
CIRBP-243ENST00000593128 CLRN3Q8NCR9 226 aa11.54□□□□□ -0.56
CIRBP-243ENST00000593128 NUDT10Q8NFP7 164 aa11.54□□□□□ -0.56
CIRBP-243ENST00000593128 NUDT11Q96G61 164 aa11.54□□□□□ -0.56
CIRBP-243ENST00000593128 RNASE7Q9H1E1 156 aaKnown RBP11.54□□□□□ -0.56
CIRBP-243ENST00000593128 AP5S1Q9NUS5 200 aa11.54□□□□□ -0.56
CIRBP-243ENST00000593128 TRAV8-4A0A0B4J246 113 aa11.53□□□□□ -0.56
CIRBP-243ENST00000593128 TRAV26-2A0A0B4J265 109 aa11.53□□□□□ -0.56
CIRBP-243ENST00000593128 PANO1I0J062 215 aa11.53□□□□□ -0.56
CIRBP-243ENST00000593128 WDR73Q6P4I2 378 aa11.53□□□□□ -0.56
CIRBP-243ENST00000593128 TEX261Q6UWH6 196 aa11.53□□□□□ -0.56
CIRBP-243ENST00000593128 ALKAL2Q6UX46 152 aa11.53□□□□□ -0.56
CIRBP-243ENST00000593128 FAT3Q8TDW7 4589 aa11.52□□□□□ -0.56
CIRBP-243ENST00000593128 IFITM2Q01629 132 aa11.52□□□□□ -0.57
CIRBP-243ENST00000593128 PGLYRP4Q96LB8 373 aa11.52□□□□□ -0.57
CIRBP-243ENST00000593128 RPP21Q9H633 154 aaKnown RBP11.52□□□□□ -0.57
CIRBP-243ENST00000593128 A0A1B0GUV1 79 aa11.51□□□□□ -0.57
CIRBP-243ENST00000593128 OXTP01178 125 aa11.51□□□□□ -0.57
CIRBP-243ENST00000593128 CTRLP40313 264 aa11.51□□□□□ -0.57
CIRBP-243ENST00000593128 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
CIRBP-243ENST00000593128 IGHV3-64A0A075B6Q5 118 aa11.5□□□□□ -0.57
CIRBP-243ENST00000593128 HNRNPA3P51991 378 aaKnown RBP11.5□□□□□ -0.57
CIRBP-243ENST00000593128 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.49□□□□□ -0.57
CIRBP-243ENST00000593128 GAGE12HA6NDE8 117 aa11.49□□□□□ -0.57
CIRBP-243ENST00000593128 K7EN84 100 aa11.49□□□□□ -0.57
CIRBP-243ENST00000593128 CHTF8P0CG12 524 aa11.49□□□□□ -0.57
CIRBP-243ENST00000593128 AMMECR1LQ6DCA0 310 aa11.49□□□□□ -0.57
CIRBP-243ENST00000593128 SMIM15Q7Z3B0 74 aa11.49□□□□□ -0.57
CIRBP-243ENST00000593128 GATD1Q8NB37 220 aa11.49□□□□□ -0.57
CIRBP-243ENST00000593128 OCC1Q8TAD7 63 aa11.49□□□□□ -0.57
CIRBP-243ENST00000593128 RPL39LQ96EH5 51 aaKnown RBP11.49□□□□□ -0.57
CIRBP-243ENST00000593128 CEBPGP53567 150 aa11.48□□□□□ -0.57
CIRBP-243ENST00000593128 CNBPP62633 177 aaKnown RBP11.48□□□□□ -0.57
CIRBP-243ENST00000593128 SERTAD4-AS1Q5TG53 156 aa11.48□□□□□ -0.57
CIRBP-243ENST00000593128 RNASEKQ6P5S7 137 aaKnown RBP11.48□□□□□ -0.57
CIRBP-243ENST00000593128 TAGLN2P37802 199 aaKnown RBP11.47□□□□□ -0.57
CIRBP-243ENST00000593128 FOXA3P55318 350 aaPredicted RBP11.47□□□□□ -0.57
CIRBP-243ENST00000593128 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.46□□□□□ -0.57
CIRBP-243ENST00000593128 IGKV2-29A2NJV5 120 aaPredicted RBP11.46□□□□□ -0.57
CIRBP-243ENST00000593128 HIGD2BQ4VC39 106 aa11.46□□□□□ -0.57
CIRBP-243ENST00000593128 GATCO43716 136 aaKnown RBP11.45□□□□□ -0.58
CIRBP-243ENST00000593128 APCSP02743 223 aa11.45□□□□□ -0.58
CIRBP-243ENST00000593128 SLPIP03973 132 aa11.45□□□□□ -0.58
CIRBP-243ENST00000593128 GTSF1Q8WW33 167 aa11.45□□□□□ -0.58
CIRBP-243ENST00000593128 CFAP161Q6P656 301 aa11.44□□□□□ -0.58
CIRBP-243ENST00000593128 CNFNQ9BYD5 112 aa11.44□□□□□ -0.58
CIRBP-243ENST00000593128 HMCN2Q8NDA2 5059 aa11.44□□□□□ -0.58
CIRBP-243ENST00000593128 A0A087WYN8 130 aa11.43□□□□□ -0.58
CIRBP-243ENST00000593128 BLOC1S1P78537 153 aa11.43□□□□□ -0.58
CIRBP-243ENST00000593128 C15orf56Q8N910 161 aa11.43□□□□□ -0.58
CIRBP-243ENST00000593128 CHCHD10Q8WYQ3 142 aaPredicted RBP11.43□□□□□ -0.58
CIRBP-243ENST00000593128 PLA2G2DQ9UNK4 145 aa11.43□□□□□ -0.58
CIRBP-243ENST00000593128 PMCHP20382 165 aa11.42□□□□□ -0.58
CIRBP-243ENST00000593128 BORCS7Q96B45 105 aa11.42□□□□□ -0.58
CIRBP-243ENST00000593128 IGKV2-24A0A0C4DH68 120 aa11.41□□□□□ -0.58
CIRBP-243ENST00000593128 SDHAF1A6NFY7 115 aa11.41□□□□□ -0.58
CIRBP-243ENST00000593128 NCR2O95944 276 aa11.41□□□□□ -0.58
CIRBP-243ENST00000593128 FGF6P10767 208 aa11.41□□□□□ -0.58
CIRBP-243ENST00000593128 COX6A2Q02221 97 aa11.41□□□□□ -0.58
CIRBP-243ENST00000593128 SPACA4Q8TDM5 124 aa11.41□□□□□ -0.58
CIRBP-243ENST00000593128 A8MWL6 223 aa11.4□□□□□ -0.58
CIRBP-243ENST00000593128 CIRBPQ14011 172 aaKnown RBP11.4□□□□□ -0.58
CIRBP-243ENST00000593128 BTF3L4Q96K17 158 aa11.4□□□□□ -0.58
CIRBP-243ENST00000593128 RPS10P46783 165 aaKnown RBP11.39□□□□□ -0.59
CIRBP-243ENST00000593128 RAB14P61106 215 aa11.39□□□□□ -0.59
CIRBP-243ENST00000593128 MAJINQ3KP22 176 aa11.39□□□□□ -0.59
CIRBP-243ENST00000593128 CLLU1Q5K131 121 aa11.39□□□□□ -0.59
CIRBP-243ENST00000593128 RNF185Q96GF1 192 aa11.39□□□□□ -0.59
CIRBP-243ENST00000593128 TMEM101Q96IK0 257 aa11.39□□□□□ -0.59
CIRBP-243ENST00000593128 TMEM250H0YL14 139 aa11.38□□□□□ -0.59
CIRBP-243ENST00000593128 I3L3M4 83 aa11.38□□□□□ -0.59
CIRBP-243ENST00000593128 XCL1P47992 114 aa11.38□□□□□ -0.59
CIRBP-243ENST00000593128 LYPD6BQ8NI32 183 aa11.38□□□□□ -0.59
CIRBP-243ENST00000593128 H7C423 109 aa11.37□□□□□ -0.59
CIRBP-243ENST00000593128 PHOX2AO14813 284 aa11.37□□□□□ -0.59
CIRBP-243ENST00000593128 PRSS3P2Q8NHM4 247 aa11.37□□□□□ -0.59
CIRBP-243ENST00000593128 C7orf33Q8WU49 177 aa11.37□□□□□ -0.59
CIRBP-243ENST00000593128 EIF5A2Q9GZV4 153 aaKnown RBP11.37□□□□□ -0.59
CIRBP-243ENST00000593128 ST20Q9HBF5 79 aa11.37□□□□□ -0.59
CIRBP-243ENST00000593128 TMEM242Q9NWH2 141 aa11.37□□□□□ -0.59
CIRBP-243ENST00000593128 NDUFS6O75380 124 aaKnown RBP11.36□□□□□ -0.59
CIRBP-243ENST00000593128 GAS8-AS1O95177 125 aa11.36□□□□□ -0.59
CIRBP-243ENST00000593128 FAM231DQ6ZW35 169 aa11.36□□□□□ -0.59
CIRBP-243ENST00000593128 OR5A1Q8NGJ0 315 aa11.36□□□□□ -0.59
CIRBP-243ENST00000593128 CCL25O15444 150 aa11.35□□□□□ -0.59
CIRBP-243ENST00000593128 FOXI1Q12951 378 aa11.35□□□□□ -0.59
CIRBP-243ENST00000593128 SMIM7Q9BQ49 75 aa11.35□□□□□ -0.59
CIRBP-243ENST00000593128 UBR4Q5T4S7 5183 aa11.34□□□□□ -0.59
CIRBP-243ENST00000593128 FAM231BA6NCW3 169 aa11.34□□□□□ -0.59
CIRBP-243ENST00000593128 TSHBP01222 138 aa11.34□□□□□ -0.59
CIRBP-243ENST00000593128 ZNF25P17030 456 aaPredicted RBP11.34□□□□□ -0.59
CIRBP-243ENST00000593128 Q6ZRU5 148 aa11.34□□□□□ -0.59
CIRBP-243ENST00000593128 STPG4Q8N801 248 aa11.34□□□□□ -0.59
CIRBP-243ENST00000593128 LINC00526Q96FQ7 95 aa11.34□□□□□ -0.59
CIRBP-243ENST00000593128 MRAP2Q96G30 205 aa11.34□□□□□ -0.59
CIRBP-243ENST00000593128 PLAC8Q9NZF1 115 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms