RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 CACNA1AO00555 2505 aa8.44□□□□□ -1.06
ZNF540-210ENST00000592533 IGHV4-31P0DP07 118 aa8.44□□□□□ -1.06
ZNF540-210ENST00000592533 SLURP1P55000 103 aa8.44□□□□□ -1.06
ZNF540-210ENST00000592533 PROK1P58294 105 aa8.44□□□□□ -1.06
ZNF540-210ENST00000592533 FHL3Q13643 280 aa8.44□□□□□ -1.06
ZNF540-210ENST00000592533 PEMTQ9UBM1 199 aa8.44□□□□□ -1.06
ZNF540-210ENST00000592533 IGHV3-53P01767 116 aa8.44□□□□□ -1.06
ZNF540-210ENST00000592533 C4orf3Q8WVX3 66 aa8.44□□□□□ -1.06
ZNF540-210ENST00000592533 DUX3Q96PT4 197 aa8.44□□□□□ -1.06
ZNF540-210ENST00000592533 IGSF10Q6WRI0 2623 aa8.44□□□□□ -1.06
ZNF540-210ENST00000592533 VSIG2Q96IQ7 327 aa8.43□□□□□ -1.06
ZNF540-210ENST00000592533 SPXQ9BT56 116 aa8.43□□□□□ -1.06
ZNF540-210ENST00000592533 IGHV3-64A0A075B6Q5 118 aa8.43□□□□□ -1.06
ZNF540-210ENST00000592533 TRBV30A0A0K0K1B3 111 aa8.43□□□□□ -1.06
ZNF540-210ENST00000592533 SCGB1C2P0DMR2 95 aa8.43□□□□□ -1.06
ZNF540-210ENST00000592533 Q6ZSN1 163 aa8.43□□□□□ -1.06
ZNF540-210ENST00000592533 MAP1AP78559 2803 aaPredicted RBP8.43□□□□□ -1.06
ZNF540-210ENST00000592533 TMEM61Q8N0U2 210 aa8.43□□□□□ -1.06
ZNF540-210ENST00000592533 ANKRD29Q8N6D5 301 aa8.43□□□□□ -1.06
ZNF540-210ENST00000592533 MAP6D1Q9H9H5 199 aa8.43□□□□□ -1.06
ZNF540-210ENST00000592533 IGLV5-45A0A087WSX0 123 aa8.42□□□□□ -1.06
ZNF540-210ENST00000592533 IGHV3-73A0A0B4J1V6 119 aa8.42□□□□□ -1.06
ZNF540-210ENST00000592533 TIMM17BO60830 172 aa8.42□□□□□ -1.06
ZNF540-210ENST00000592533 C18orf65Q6ZTR6 163 aa8.42□□□□□ -1.06
ZNF540-210ENST00000592533 RS1O15537 224 aa8.42□□□□□ -1.06
ZNF540-210ENST00000592533 CIDEAO60543 219 aa8.42□□□□□ -1.06
ZNF540-210ENST00000592533 RAX2Q96IS3 184 aa8.42□□□□□ -1.06
ZNF540-210ENST00000592533 SLC25A20O43772 301 aa8.41□□□□□ -1.06
ZNF540-210ENST00000592533 BEX4Q9NWD9 120 aaPredicted RBP8.41□□□□□ -1.06
ZNF540-210ENST00000592533 MIAQ16674 131 aa8.41□□□□□ -1.06
ZNF540-210ENST00000592533 DEFB136Q30KP8 78 aa8.41□□□□□ -1.06
ZNF540-210ENST00000592533 ZFAND6Q6FIF0 208 aa8.41□□□□□ -1.06
ZNF540-210ENST00000592533 CEMP1Q6PRD7 247 aaPredicted RBP8.41□□□□□ -1.06
ZNF540-210ENST00000592533 PIEZO1Q92508 2521 aa8.41□□□□□ -1.06
ZNF540-210ENST00000592533 TRAV8-3A0A0A6YYJ7 113 aa8.4□□□□□ -1.06
ZNF540-210ENST00000592533 A0A1B0GV72 72 aa8.4□□□□□ -1.06
ZNF540-210ENST00000592533 ATXN8Q156A1 80 aa8.4□□□□□ -1.06
ZNF540-210ENST00000592533 Q6ZUT4 128 aa8.4□□□□□ -1.06
ZNF540-210ENST00000592533 Q9UF83 564 aa8.4□□□□□ -1.06
ZNF540-210ENST00000592533 NDUFA12Q9UI09 145 aa8.4□□□□□ -1.06
ZNF540-210ENST00000592533 MXRA5Q9NR99 2828 aa8.4□□□□□ -1.06
ZNF540-210ENST00000592533 INSP01308 110 aa8.4□□□□□ -1.06
ZNF540-210ENST00000592533 TIRAPP58753 221 aa8.4□□□□□ -1.06
ZNF540-210ENST00000592533 IL17DQ8TAD2 202 aa8.4□□□□□ -1.06
ZNF540-210ENST00000592533 HTN1P15515 57 aa8.4□□□□□ -1.07
ZNF540-210ENST00000592533 MAPK1IP1LQ8NDC0 245 aa8.4□□□□□ -1.07
ZNF540-210ENST00000592533 ZANQ9Y493 2812 aa8.4□□□□□ -1.07
ZNF540-210ENST00000592533 DEFB114Q30KQ6 69 aa8.39□□□□□ -1.07
ZNF540-210ENST00000592533 ADAMTSL4-AS1Q5T5F5 129 aa8.39□□□□□ -1.07
ZNF540-210ENST00000592533 FAM19A3Q7Z5A8 133 aa8.39□□□□□ -1.07
ZNF540-210ENST00000592533 C9JAW5 83 aa8.39□□□□□ -1.07
ZNF540-210ENST00000592533 TMEM262E9PQX1 116 aa8.39□□□□□ -1.07
ZNF540-210ENST00000592533 XGP55808 180 aa8.39□□□□□ -1.07
ZNF540-210ENST00000592533 PRM2P04554 102 aa8.38□□□□□ -1.07
ZNF540-210ENST00000592533 UTP20O75691 2785 aaKnown RBP8.38□□□□□ -1.07
ZNF540-210ENST00000592533 TRIAP1O43715 76 aa8.38□□□□□ -1.07
ZNF540-210ENST00000592533 IFITM1P13164 125 aa8.38□□□□□ -1.07
ZNF540-210ENST00000592533 RPL13AP40429 203 aaKnown RBP8.38□□□□□ -1.07
ZNF540-210ENST00000592533 LINC01620Q4KN68 170 aa8.38□□□□□ -1.07
ZNF540-210ENST00000592533 YAE1D1Q9NRH1 226 aa8.38□□□□□ -1.07
ZNF540-210ENST00000592533 USP9YO00507 2555 aaPredicted RBP8.38□□□□□ -1.07
ZNF540-210ENST00000592533 FBN2P35556 2912 aa8.38□□□□□ -1.07
ZNF540-210ENST00000592533 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.38□□□□□ -1.07
ZNF540-210ENST00000592533 IGKV2-29A2NJV5 120 aaPredicted RBP8.38□□□□□ -1.07
ZNF540-210ENST00000592533 ADARB2-AS1A8MUL3 147 aa8.38□□□□□ -1.07
ZNF540-210ENST00000592533 LINC01587Q99440 93 aa8.38□□□□□ -1.07
ZNF540-210ENST00000592533 NDUFA1O15239 70 aa8.37□□□□□ -1.07
ZNF540-210ENST00000592533 MT-ATP8P03928 68 aa8.37□□□□□ -1.07
ZNF540-210ENST00000592533 SPINK8P0C7L1 97 aa8.37□□□□□ -1.07
ZNF540-210ENST00000592533 RNASE13Q5GAN3 156 aaKnown RBP8.37□□□□□ -1.07
ZNF540-210ENST00000592533 LRRC75A-AS1Q8N1F1 130 aa8.37□□□□□ -1.07
ZNF540-210ENST00000592533 TRAV25A0A0B4J276 109 aa8.37□□□□□ -1.07
ZNF540-210ENST00000592533 DYNLRB2Q8TF09 96 aa8.37□□□□□ -1.07
ZNF540-210ENST00000592533 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
ZNF540-210ENST00000592533 TMEM86BQ8N661 226 aa8.36□□□□□ -1.07
ZNF540-210ENST00000592533 ICOSQ9Y6W8 199 aa8.36□□□□□ -1.07
ZNF540-210ENST00000592533 CSMD2Q7Z408 3487 aa8.36□□□□□ -1.07
ZNF540-210ENST00000592533 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
ZNF540-210ENST00000592533 Q1RN00 199 aa8.36□□□□□ -1.07
ZNF540-210ENST00000592533 GEMIN7Q9H840 131 aaKnown RBP8.36□□□□□ -1.07
ZNF540-210ENST00000592533 CSDC2Q9Y534 153 aaKnown RBP8.36□□□□□ -1.07
ZNF540-210ENST00000592533 H7C2G1 150 aa8.36□□□□□ -1.07
ZNF540-210ENST00000592533 CKS1BP61024 79 aa8.35□□□□□ -1.07
ZNF540-210ENST00000592533 ODF3L2Q3SX64 289 aa8.35□□□□□ -1.07
ZNF540-210ENST00000592533 CDKN2A-AS1Q9UH64 79 aa8.35□□□□□ -1.07
ZNF540-210ENST00000592533 MYO18BQ8IUG5 2567 aa8.35□□□□□ -1.07
ZNF540-210ENST00000592533 CREBBPQ92793 2442 aa8.35□□□□□ -1.07
ZNF540-210ENST00000592533 AKAP9Q99996 3911 aa8.34□□□□□ -1.07
ZNF540-210ENST00000592533 TMEM101Q96IK0 257 aa8.34□□□□□ -1.07
ZNF540-210ENST00000592533 TRBV10-1A0A0K0K1A3 114 aa8.34□□□□□ -1.07
ZNF540-210ENST00000592533 PRSS2P07478 247 aa8.34□□□□□ -1.07
ZNF540-210ENST00000592533 DEFB113Q30KQ7 82 aa8.34□□□□□ -1.07
ZNF540-210ENST00000592533 IGHV3OR16-12A0A075B7B8 117 aa8.34□□□□□ -1.08
ZNF540-210ENST00000592533 A8MZ25 164 aa8.34□□□□□ -1.08
ZNF540-210ENST00000592533 HERVK_113P63121 156 aa8.34□□□□□ -1.08
ZNF540-210ENST00000592533 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.34□□□□□ -1.08
ZNF540-210ENST00000592533 IGHV3-38A0A0C4DH36 116 aa8.33□□□□□ -1.08
ZNF540-210ENST00000592533 H3BT86 120 aa8.33□□□□□ -1.08
ZNF540-210ENST00000592533 C1orf158Q8N1D5 194 aa8.33□□□□□ -1.08
ZNF540-210ENST00000592533 CITED1Q99966 193 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms