RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 KRTAP10-6P60371 365 aaPredicted RBP3.16□□□□□ -1.9
ERCC1-216ENST00000592444 HIST1H2BCP62807 126 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 HIST2H2BEQ16778 126 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.16□□□□□ -1.9
ERCC1-216ENST00000592444 EBLN2Q6P2I7 272 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 LYZL1Q6UWQ5 148 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 TMEM256Q8N2U0 113 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 FER1L6-AS1Q8NA97 138 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 HIST1H2BHQ93079 126 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 HIST1H2BNQ99877 126 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 HIST1H2BMQ99879 126 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 NDFIP1Q9BT67 221 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 C1QTNF4Q9BXJ3 329 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 GNB1LQ9BYB4 327 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 NAT8BQ9UHF3 227 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 URGCP-MRPS24S4R325 110 aa3.16□□□□□ -1.9
ERCC1-216ENST00000592444 TRAV9-2A0A087WT02 112 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 TRAV26-1A0A087WT03 109 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 A0A096LNJ9 63 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 A0A0J9YY99 117 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 A0A1B0GUT8 65 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 GNRH2O43555 120 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 SPINK4O60575 86 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 INSP01308 110 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 IGKV3-20P01619 116 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 ATP5G1P05496 136 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 GPX1P07203 203 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 RNASE4P34096 147 aaKnown RBP3.15□□□□□ -1.91
ERCC1-216ENST00000592444 FXYD7P58549 80 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 RPS20P60866 119 aaKnown RBP3.15□□□□□ -1.91
ERCC1-216ENST00000592444 DAZ2Q13117 558 aaKnown RBP3.15□□□□□ -1.91
ERCC1-216ENST00000592444 MUC21Q5SSG8 566 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 NRACQ8N912 160 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 TMEM263Q8WUH6 116 aaKnown RBP3.15□□□□□ -1.91
ERCC1-216ENST00000592444 RASL10AQ92737 203 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 BTF3L4Q96K17 158 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 TMEM191AQ9H0A3 160 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 JPT2Q9H910 190 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 GSN-AS1Q9NRJ2 163 aa3.15□□□□□ -1.91
ERCC1-216ENST00000592444 TMSB15BA0A087X1C1 80 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 A0A1B0GW15 77 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 GRIFINA4D1Z8 144 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 PRSS47A8MTI9 375 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 F2Z2F3 143 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 J3KRW8 73 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 HLA-DQA1P01909 254 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 MT-ND6P03923 174 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 TRGC2P03986 189 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 CFC1BP0CG36 223 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 ESDP10768 282 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 RPS10P46783 165 aaKnown RBP3.14□□□□□ -1.91
ERCC1-216ENST00000592444 HBBP68871 147 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 WFDC2Q14508 124 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 FAM104BQ5XKR9 115 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 MRPL54Q6P161 138 aaKnown RBP3.14□□□□□ -1.91
ERCC1-216ENST00000592444 KCNS1Q96KK3 526 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 PGLYRP4Q96LB8 373 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 SAMD10Q9BYL1 202 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 Q9UF83 564 aa3.14□□□□□ -1.91
ERCC1-216ENST00000592444 TRGV11A0A075B6L2 103 aa3.13□□□□□ -1.91
ERCC1-216ENST00000592444 ORM1P02763 201 aa3.13□□□□□ -1.91
ERCC1-216ENST00000592444 RAB4AP20338 218 aa3.13□□□□□ -1.91
ERCC1-216ENST00000592444 NTF3P20783 257 aa3.13□□□□□ -1.91
ERCC1-216ENST00000592444 EVI2AP22794 236 aa3.13□□□□□ -1.91
ERCC1-216ENST00000592444 NUTF2P61970 127 aaKnown RBP3.13□□□□□ -1.91
ERCC1-216ENST00000592444 RPL32P62910 135 aaKnown RBP3.13□□□□□ -1.91
ERCC1-216ENST00000592444 MRPL51Q4U2R6 128 aaKnown RBP3.13□□□□□ -1.91
ERCC1-216ENST00000592444 Q6ZTI0 123 aa3.13□□□□□ -1.91
ERCC1-216ENST00000592444 AMN1Q8IY45 258 aa3.13□□□□□ -1.91
ERCC1-216ENST00000592444 C18orf32Q8TCD1 76 aa3.13□□□□□ -1.91
ERCC1-216ENST00000592444 FAM104AQ969W3 186 aa3.13□□□□□ -1.91
ERCC1-216ENST00000592444 ALKBH7Q9BT30 221 aaPredicted RBP3.13□□□□□ -1.91
ERCC1-216ENST00000592444 MUC21A0A0G2JKD1 596 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 TRBV6-5A0A0K0K1A5 114 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 MUC21A0A140T8X8 626 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 C5orf52A6NGY3 159 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 CBY3A6NI87 242 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 LYRM9A8MSI8 78 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 SNURFLB1AK76 121 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 M0QY20 66 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 M0R2P5 195 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 M0R381 172 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 NUPR1O60356 82 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 NPYP01303 97 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 GATA1P15976 413 aaPredicted RBP3.12□□□□□ -1.91
ERCC1-216ENST00000592444 CACNG7P62955 275 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 ZNF415Q09FC8 603 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 Q0VG73 95 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 RRN3P1Q2M238 152 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 COX19Q49B96 90 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 CFAP126Q5VTH2 177 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 KCNIP4Q6PIL6 250 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 FAM159AQ6UWV7 190 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 ZFP82Q8N141 532 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 C16orf74Q96GX8 76 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 SPXQ9BT56 116 aa3.12□□□□□ -1.91
ERCC1-216ENST00000592444 TRAV4A0A0B4J268 109 aa3.11□□□□□ -1.91
ERCC1-216ENST00000592444 XKRY2A2RUG3 117 aa3.11□□□□□ -1.91
ERCC1-216ENST00000592444 LECT2O14960 151 aa3.11□□□□□ -1.91
ERCC1-216ENST00000592444 IGHV3-53P01767 116 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms