RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TGIF2-C20orf24A0A0A6YYL0 155 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 TRGV4A0A0C4DH28 118 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 A0A1B0GXF2 115 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 LINC01549A6NIU2 74 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 PHOX2AO14813 284 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 SCO1O75880 301 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 NTF3P20783 257 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 SRIP30626 198 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 FABP9Q0Z7S8 132 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 C10orf126Q8N4M7 172 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 GTSF1Q8WW33 167 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 MRAP2Q96G30 205 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 DPH3P1Q9H4G8 78 aa6.44□□□□□ -1.38
BRCA1-226ENST00000591534 IGHV3-16A0A0C4DH30 117 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 H3BVH4 76 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 K7EMI3 77 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 CAMPP49913 170 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 CRYBA4P53673 196 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 OR10J3Q5JRS4 329 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 MUC21Q5SSG8 566 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 LCE5AQ5TCM9 118 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 MRPL54Q6P161 138 aaKnown RBP6.43□□□□□ -1.38
BRCA1-226ENST00000591534 LYPD5Q6UWN5 251 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 Q6ZRN7 208 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-226ENST00000591534 SH2D6Q7Z4S9 175 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 ORMDL3Q8N138 153 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 C9orf85Q96MD7 179 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 MSRB1Q9NZV6 116 aa6.43□□□□□ -1.38
BRCA1-226ENST00000591534 APOBP04114 4563 aaKnown RBP6.43□□□□□ -1.38
BRCA1-226ENST00000591534 IGHV3-53P01767 116 aa6.42□□□□□ -1.38
BRCA1-226ENST00000591534 ZNF876PQ49A33 203 aa6.42□□□□□ -1.38
BRCA1-226ENST00000591534 ZFP2Q6ZN57 461 aa6.42□□□□□ -1.38
BRCA1-226ENST00000591534 RASL10AQ92737 203 aa6.42□□□□□ -1.38
BRCA1-226ENST00000591534 MRPL16Q9NX20 251 aaKnown RBP6.42□□□□□ -1.38
BRCA1-226ENST00000591534 A0A087WTM6 91 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 GRIFINA4D1Z8 144 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 M0R381 172 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 PRYO14603 147 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 PSCAO43653 123 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 TRGC2P03986 189 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 RAB4AP20338 218 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 PMCHP20382 165 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 CKS2P33552 79 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 PCP4P48539 62 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 Q5VSD8 79 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 FAM104BQ5XKR9 115 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 TMEM136Q6ZRR5 245 aa6.41□□□□□ -1.38
BRCA1-226ENST00000591534 K7EQD1 137 aa6.4□□□□□ -1.38
BRCA1-226ENST00000591534 GZMBP10144 247 aa6.4□□□□□ -1.38
BRCA1-226ENST00000591534 RNASE3P12724 160 aaKnown RBP6.4□□□□□ -1.38
BRCA1-226ENST00000591534 AKR1D1P51857 326 aa6.4□□□□□ -1.38
BRCA1-226ENST00000591534 XGP55808 180 aa6.4□□□□□ -1.38
BRCA1-226ENST00000591534 SMAGPQ0VAQ4 97 aa6.4□□□□□ -1.38
BRCA1-226ENST00000591534 FHL2Q14192 279 aa6.4□□□□□ -1.38
BRCA1-226ENST00000591534 NTN5Q8WTR8 489 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-226ENST00000591534 KRTAP9-3Q9BYQ3 159 aa6.4□□□□□ -1.38
BRCA1-226ENST00000591534 GNRH2O43555 120 aa6.39□□□□□ -1.39
BRCA1-226ENST00000591534 CRYGDP07320 174 aa6.39□□□□□ -1.39
BRCA1-226ENST00000591534 DNAH10OSP0CZ25 163 aa6.39□□□□□ -1.39
BRCA1-226ENST00000591534 Q0VG73 95 aa6.39□□□□□ -1.39
BRCA1-226ENST00000591534 BAGE3Q86Y29 109 aa6.39□□□□□ -1.39
BRCA1-226ENST00000591534 OR10AG1Q8NH19 301 aa6.39□□□□□ -1.39
BRCA1-226ENST00000591534 C20orf78Q9BR46 151 aa6.39□□□□□ -1.39
BRCA1-226ENST00000591534 NXT2Q9NPJ8 142 aaKnown RBP6.39□□□□□ -1.39
BRCA1-226ENST00000591534 C11orf21Q9P2W6 132 aa6.39□□□□□ -1.39
BRCA1-226ENST00000591534 IGLV5-52A0A0A0MRZ9 124 aa6.38□□□□□ -1.39
BRCA1-226ENST00000591534 TRAV4A0A0B4J268 109 aa6.38□□□□□ -1.39
BRCA1-226ENST00000591534 TRBV10-1A0A0K0K1A3 114 aa6.38□□□□□ -1.39
BRCA1-226ENST00000591534 S100A2P29034 98 aa6.38□□□□□ -1.39
BRCA1-226ENST00000591534 OR4C5Q8NGB2 326 aa6.38□□□□□ -1.39
BRCA1-226ENST00000591534 CHCHD1Q96BP2 118 aaKnown RBP6.38□□□□□ -1.39
BRCA1-226ENST00000591534 DNAJC30Q96LL9 226 aa6.38□□□□□ -1.39
BRCA1-226ENST00000591534 MAP1LC3AQ9H492 121 aa6.38□□□□□ -1.39
BRCA1-226ENST00000591534 TNFRSF18Q9Y5U5 241 aa6.38□□□□□ -1.39
BRCA1-226ENST00000591534 HERC1Q15751 4861 aa6.38□□□□□ -1.39
BRCA1-226ENST00000591534 TRAV8-6A0A0B4J262 113 aa6.37□□□□□ -1.39
BRCA1-226ENST00000591534 KRTAP10-1P60331 282 aa6.37□□□□□ -1.39
BRCA1-226ENST00000591534 RPL32P62910 135 aaKnown RBP6.37□□□□□ -1.39
BRCA1-226ENST00000591534 TMEM97Q5BJF2 176 aa6.37□□□□□ -1.39
BRCA1-226ENST00000591534 COA6Q5JTJ3 125 aaKnown RBP6.37□□□□□ -1.39
BRCA1-226ENST00000591534 WFDC10BQ8IUB3 73 aa6.37□□□□□ -1.39
BRCA1-226ENST00000591534 ZNF479Q96JC4 524 aa6.37□□□□□ -1.39
BRCA1-226ENST00000591534 PACRGQ96M98 296 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-226ENST00000591534 PRELID3AQ96N28 172 aa6.37□□□□□ -1.39
BRCA1-226ENST00000591534 TMEM70Q9BUB7 260 aa6.37□□□□□ -1.39
BRCA1-226ENST00000591534 MDFICQ9P1T7 246 aa6.37□□□□□ -1.39
BRCA1-226ENST00000591534 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-226ENST00000591534 IGHV3-38A0A0C4DH36 116 aa6.36□□□□□ -1.39
BRCA1-226ENST00000591534 FUSP35637 526 aaKnown RBP eCLIP6.36□□□□□ -1.39
BRCA1-226ENST00000591534 ZNF56Q15929 161 aa6.36□□□□□ -1.39
BRCA1-226ENST00000591534 FA2HQ7L5A8 372 aa6.36□□□□□ -1.39
BRCA1-226ENST00000591534 PRSS3P2Q8NHM4 247 aa6.36□□□□□ -1.39
BRCA1-226ENST00000591534 KIR2DL4Q99706 377 aa6.36□□□□□ -1.39
BRCA1-226ENST00000591534 PRADC1Q9BSG0 188 aa6.36□□□□□ -1.39
BRCA1-226ENST00000591534 ALKBH7Q9BT30 221 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-226ENST00000591534 PRSS47A8MTI9 375 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 HIST1H2BKO60814 126 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 SMR3BP02814 79 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-226ENST00000591534 HIST1H2BJP06899 126 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 MGPP08493 103 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms