RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 NACAE9PAV3 2078 aa12.73□□□□□ -0.37
SMARCA4-215ENST00000590574 TRBV6-5A0A0K0K1A5 114 aa12.73□□□□□ -0.37
SMARCA4-215ENST00000590574 SOCS3O14543 225 aa12.73□□□□□ -0.37
SMARCA4-215ENST00000590574 RPL32P62910 135 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-215ENST00000590574 DCANP1Q8TF63 244 aa12.73□□□□□ -0.37
SMARCA4-215ENST00000590574 IGHV3-30P01768 117 aa12.73□□□□□ -0.37
SMARCA4-215ENST00000590574 IGHV3-30-5P0DP03 117 aa12.73□□□□□ -0.37
SMARCA4-215ENST00000590574 LINC00467Q9BRT7 94 aa12.73□□□□□ -0.37
SMARCA4-215ENST00000590574 IGLV2-18A0A075B6J9 118 aa12.72□□□□□ -0.37
SMARCA4-215ENST00000590574 TSHBP01222 138 aa12.72□□□□□ -0.37
SMARCA4-215ENST00000590574 CUL9Q8IWT3 2517 aa12.72□□□□□ -0.37
SMARCA4-215ENST00000590574 DAD1P61803 113 aa12.71□□□□□ -0.37
SMARCA4-215ENST00000590574 Q6YL49 198 aa12.71□□□□□ -0.37
SMARCA4-215ENST00000590574 F5H768 121 aa12.71□□□□□ -0.37
SMARCA4-215ENST00000590574 GHRHP01286 108 aa12.7□□□□□ -0.38
SMARCA4-215ENST00000590574 MT-ATP8P03928 68 aa12.7□□□□□ -0.38
SMARCA4-215ENST00000590574 COX7B2Q8TF08 81 aa12.7□□□□□ -0.38
SMARCA4-215ENST00000590574 C9orf153Q5TBE3 101 aa12.7□□□□□ -0.38
SMARCA4-215ENST00000590574 C9orf85Q96MD7 179 aa12.7□□□□□ -0.38
SMARCA4-215ENST00000590574 CSPG4Q6UVK1 2322 aa12.7□□□□□ -0.38
SMARCA4-215ENST00000590574 SND1-IT1Q9HBX3 110 aa12.7□□□□□ -0.38
SMARCA4-215ENST00000590574 B5MCH6 92 aa12.69□□□□□ -0.38
SMARCA4-215ENST00000590574 CRYGDP07320 174 aa12.69□□□□□ -0.38
SMARCA4-215ENST00000590574 IGIPA6NJ69 53 aa12.68□□□□□ -0.38
SMARCA4-215ENST00000590574 TRAV25A0A0B4J276 109 aa12.68□□□□□ -0.38
SMARCA4-215ENST00000590574 CFAP126Q5VTH2 177 aa12.68□□□□□ -0.38
SMARCA4-215ENST00000590574 CDKN2A-AS1Q9UH64 79 aa12.68□□□□□ -0.38
SMARCA4-215ENST00000590574 ATRXP46100 2492 aa12.68□□□□□ -0.38
SMARCA4-215ENST00000590574 ANGP03950 147 aaKnown RBP12.68□□□□□ -0.38
SMARCA4-215ENST00000590574 H3BT86 120 aa12.67□□□□□ -0.38
SMARCA4-215ENST00000590574 PRRC2CQ9Y520 2896 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-215ENST00000590574 IGHV3-33P01772 117 aa12.67□□□□□ -0.38
SMARCA4-215ENST00000590574 INSL3P51460 131 aa12.67□□□□□ -0.38
SMARCA4-215ENST00000590574 SS18L2Q9UHA2 77 aa12.67□□□□□ -0.38
SMARCA4-215ENST00000590574 PRM2P04554 102 aa12.67□□□□□ -0.38
SMARCA4-215ENST00000590574 HIST2H2BDQ6DRA6 164 aa12.67□□□□□ -0.38
SMARCA4-215ENST00000590574 IGHV4-31P0DP07 118 aa12.66□□□□□ -0.38
SMARCA4-215ENST00000590574 TMEM263Q8WUH6 116 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-215ENST00000590574 ACACBO00763 2458 aa12.66□□□□□ -0.38
SMARCA4-215ENST00000590574 A8MZ25 164 aa12.66□□□□□ -0.38
SMARCA4-215ENST00000590574 Q6ZTI0 123 aa12.66□□□□□ -0.38
SMARCA4-215ENST00000590574 TEX49A0A1B0GTD5 131 aa12.66□□□□□ -0.38
SMARCA4-215ENST00000590574 AVPP01185 164 aa12.66□□□□□ -0.38
SMARCA4-215ENST00000590574 GYPEP15421 78 aa12.66□□□□□ -0.38
SMARCA4-215ENST00000590574 CRIP2P52943 208 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-215ENST00000590574 ACYP1P07311 99 aa12.65□□□□□ -0.38
SMARCA4-215ENST00000590574 DEFB114Q30KQ6 69 aa12.65□□□□□ -0.38
SMARCA4-215ENST00000590574 CITED2Q99967 270 aaPredicted RBP12.65□□□□□ -0.38
SMARCA4-215ENST00000590574 IGLV4-69A0A075B6H9 119 aa12.65□□□□□ -0.38
SMARCA4-215ENST00000590574 TRIAP1O43715 76 aa12.65□□□□□ -0.38
SMARCA4-215ENST00000590574 TRAV4A0A0B4J268 109 aa12.64□□□□□ -0.39
SMARCA4-215ENST00000590574 RS1O15537 224 aa12.64□□□□□ -0.39
SMARCA4-215ENST00000590574 C18orf65Q6ZTR6 163 aa12.64□□□□□ -0.39
SMARCA4-215ENST00000590574 ZNF702PQ9H963 129 aa12.64□□□□□ -0.39
SMARCA4-215ENST00000590574 PYGO1Q9Y3Y4 419 aa12.64□□□□□ -0.39
SMARCA4-215ENST00000590574 TRBV10-1A0A0K0K1A3 114 aa12.63□□□□□ -0.39
SMARCA4-215ENST00000590574 MIR7-3HGQ8N6C7 128 aa12.63□□□□□ -0.39
SMARCA4-215ENST00000590574 TRAV26-1A0A087WT03 109 aa12.62□□□□□ -0.39
SMARCA4-215ENST00000590574 LINC01546A6NGU7 62 aa12.62□□□□□ -0.39
SMARCA4-215ENST00000590574 DNAJC9-AS1A6NH13 148 aa12.62□□□□□ -0.39
SMARCA4-215ENST00000590574 CRLF1O75462 422 aa12.61□□□□□ -0.39
SMARCA4-215ENST00000590574 SPATA25Q9BR10 227 aa12.61□□□□□ -0.39
SMARCA4-215ENST00000590574 APOC4P55056 127 aa12.61□□□□□ -0.39
SMARCA4-215ENST00000590574 TRBV30A0A0K0K1B3 111 aa12.6□□□□□ -0.39
SMARCA4-215ENST00000590574 TSPEAR-AS2P59090 65 aa12.6□□□□□ -0.39
SMARCA4-215ENST00000590574 ORMDL1Q9P0S3 153 aa12.6□□□□□ -0.39
SMARCA4-215ENST00000590574 IGLV10-54A0A075B6I4 117 aa12.6□□□□□ -0.39
SMARCA4-215ENST00000590574 SPANXDQ9BXN6 97 aa12.59□□□□□ -0.39
SMARCA4-215ENST00000590574 CEP295Q9C0D2 2601 aa12.59□□□□□ -0.39
SMARCA4-215ENST00000590574 H0YGX0 51 aa12.59□□□□□ -0.39
SMARCA4-215ENST00000590574 PTPRBP23467 1997 aa12.59□□□□□ -0.39
SMARCA4-215ENST00000590574 DNAH14Q0VDD8 3507 aa12.59□□□□□ -0.39
SMARCA4-215ENST00000590574 ZNF561-AS1K7EIQ3 104 aa12.59□□□□□ -0.39
SMARCA4-215ENST00000590574 UBE2D4Q9Y2X8 147 aa12.59□□□□□ -0.39
SMARCA4-215ENST00000590574 RNF183Q96D59 192 aa12.58□□□□□ -0.4
SMARCA4-215ENST00000590574 Q9HAA7 133 aa12.58□□□□□ -0.4
SMARCA4-215ENST00000590574 NDUFA1O15239 70 aa12.58□□□□□ -0.4
SMARCA4-215ENST00000590574 LINC00308Q8TCZ7 52 aa12.58□□□□□ -0.4
SMARCA4-215ENST00000590574 HIST2H2BCQ6DN03 193 aa12.57□□□□□ -0.4
SMARCA4-215ENST00000590574 ESM1Q9NQ30 184 aa12.57□□□□□ -0.4
SMARCA4-215ENST00000590574 UBE2D1P51668 147 aa12.57□□□□□ -0.4
SMARCA4-215ENST00000590574 UBL5Q9BZL1 73 aa12.57□□□□□ -0.4
SMARCA4-215ENST00000590574 FAM236AA0A1B0GUQ0 79 aa12.57□□□□□ -0.4
SMARCA4-215ENST00000590574 FAM236BA0A1B0GV22 79 aa12.57□□□□□ -0.4
SMARCA4-215ENST00000590574 COX7A2LO14548 114 aa12.56□□□□□ -0.4
SMARCA4-215ENST00000590574 TIRAPP58753 221 aa12.56□□□□□ -0.4
SMARCA4-215ENST00000590574 SPANXCQ9NY87 97 aa12.56□□□□□ -0.4
SMARCA4-215ENST00000590574 SORL1Q92673 2214 aa12.55□□□□□ -0.4
SMARCA4-215ENST00000590574 NCOR2Q9Y618 2525 aa12.55□□□□□ -0.4
SMARCA4-215ENST00000590574 LECT2O14960 151 aa12.55□□□□□ -0.4
SMARCA4-215ENST00000590574 BRI3O95415 125 aa12.54□□□□□ -0.4
SMARCA4-215ENST00000590574 MRPS36P82909 103 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-215ENST00000590574 Q6ZSV7 163 aa12.54□□□□□ -0.4
SMARCA4-215ENST00000590574 PIK3CD-AS1Q5SR53 167 aa12.53□□□□□ -0.4
SMARCA4-215ENST00000590574 XGP55808 180 aa12.53□□□□□ -0.4
SMARCA4-215ENST00000590574 CACNA1AO00555 2505 aa12.52□□□□□ -0.4
SMARCA4-215ENST00000590574 DEFB4AO15263 64 aa12.52□□□□□ -0.41
SMARCA4-215ENST00000590574 HAMPP81172 84 aa12.52□□□□□ -0.41
SMARCA4-215ENST00000590574 IGKV3D-7A0A0C4DH55 119 aa12.52□□□□□ -0.41
SMARCA4-215ENST00000590574 NDUFV3P56181 108 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms