RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 CKS2P33552 79 aa14.34□□□□□ -0.11
ATG4D-212ENST00000590096 CLRN3Q8NCR9 226 aa14.34□□□□□ -0.11
ATG4D-212ENST00000590096 TRAV8-3A0A0A6YYJ7 113 aa14.33□□□□□ -0.12
ATG4D-212ENST00000590096 C7orf77A4D0Y5 90 aa14.33□□□□□ -0.12
ATG4D-212ENST00000590096 UBE2L6O14933 153 aa14.33□□□□□ -0.12
ATG4D-212ENST00000590096 S100PP25815 95 aa14.33□□□□□ -0.12
ATG4D-212ENST00000590096 MPV17L2Q567V2 206 aa14.33□□□□□ -0.12
ATG4D-212ENST00000590096 TMEM70Q9BUB7 260 aa14.33□□□□□ -0.12
ATG4D-212ENST00000590096 TMEM242Q9NWH2 141 aa14.33□□□□□ -0.12
ATG4D-212ENST00000590096 KLK12Q9UKR0 248 aa14.33□□□□□ -0.12
ATG4D-212ENST00000590096 APOC3P02656 99 aa14.32□□□□□ -0.12
ATG4D-212ENST00000590096 APCSP02743 223 aa14.32□□□□□ -0.12
ATG4D-212ENST00000590096 ATRAIDQ6UW56 229 aa14.32□□□□□ -0.12
ATG4D-212ENST00000590096 NRACQ8N912 160 aa14.32□□□□□ -0.12
ATG4D-212ENST00000590096 RPS10P5Q9NQ39 176 aa14.32□□□□□ -0.12
ATG4D-212ENST00000590096 HERC2O95714 4834 aa14.31□□□□□ -0.12
ATG4D-212ENST00000590096 TRAV9-1A0A075B6T8 112 aa14.31□□□□□ -0.12
ATG4D-212ENST00000590096 A0A1B0GVY2 172 aa14.3□□□□□ -0.12
ATG4D-212ENST00000590096 D6R8Y8 96 aa14.3□□□□□ -0.12
ATG4D-212ENST00000590096 PSCAO43653 123 aa14.3□□□□□ -0.12
ATG4D-212ENST00000590096 PPBPP02775 128 aa14.3□□□□□ -0.12
ATG4D-212ENST00000590096 POLR2KP53803 58 aaKnown RBP14.3□□□□□ -0.12
ATG4D-212ENST00000590096 SUMO2P61956 95 aaKnown RBP14.3□□□□□ -0.12
ATG4D-212ENST00000590096 HECTD4Q9Y4D8 3996 aa14.3□□□□□ -0.12
ATG4D-212ENST00000590096 CRPP02741 224 aa14.29□□□□□ -0.12
ATG4D-212ENST00000590096 ANGP03950 147 aaKnown RBP14.29□□□□□ -0.12
ATG4D-212ENST00000590096 RBX1P62877 108 aa14.29□□□□□ -0.12
ATG4D-212ENST00000590096 SVBPQ8N300 66 aa14.29□□□□□ -0.12
ATG4D-212ENST00000590096 Q8N976 141 aa14.29□□□□□ -0.12
ATG4D-212ENST00000590096 UBE2WQ96B02 151 aa14.29□□□□□ -0.12
ATG4D-212ENST00000590096 TM2D2Q9BX73 214 aa14.29□□□□□ -0.12
ATG4D-212ENST00000590096 KRTAP17-1Q9BYP8 105 aa14.29□□□□□ -0.12
ATG4D-212ENST00000590096 TRBV27A0A0K0K1C4 114 aa14.28□□□□□ -0.12
ATG4D-212ENST00000590096 VCYO14598 125 aa14.28□□□□□ -0.12
ATG4D-212ENST00000590096 SNAPINO95295 136 aa14.28□□□□□ -0.12
ATG4D-212ENST00000590096 ORMDL3Q8N138 153 aa14.28□□□□□ -0.12
ATG4D-212ENST00000590096 RMI2Q96E14 147 aa14.28□□□□□ -0.12
ATG4D-212ENST00000590096 C20orf78Q9BR46 151 aa14.28□□□□□ -0.12
ATG4D-212ENST00000590096 TRBV24-1A0A075B6N3 115 aa14.27□□□□□ -0.13
ATG4D-212ENST00000590096 TNFRSF6BO95407 300 aa14.27□□□□□ -0.13
ATG4D-212ENST00000590096 Q0VG73 95 aa14.27□□□□□ -0.13
ATG4D-212ENST00000590096 PHOX2AO14813 284 aa14.26□□□□□ -0.13
ATG4D-212ENST00000590096 EREGO14944 169 aa14.26□□□□□ -0.13
ATG4D-212ENST00000590096 TSHBP01222 138 aa14.26□□□□□ -0.13
ATG4D-212ENST00000590096 FCER1GP30273 86 aa14.26□□□□□ -0.13
ATG4D-212ENST00000590096 TMEM136Q6ZRR5 245 aa14.26□□□□□ -0.13
ATG4D-212ENST00000590096 KIR2DL4Q99706 377 aa14.26□□□□□ -0.13
ATG4D-212ENST00000590096 A0A1B0GUV1 79 aa14.25□□□□□ -0.13
ATG4D-212ENST00000590096 H7C423 109 aa14.25□□□□□ -0.13
ATG4D-212ENST00000590096 PRELID3AQ96N28 172 aa14.25□□□□□ -0.13
ATG4D-212ENST00000590096 COX11Q9Y6N1 276 aa14.25□□□□□ -0.13
ATG4D-212ENST00000590096 PKD1P98161 4303 aa14.25□□□□□ -0.13
ATG4D-212ENST00000590096 IGKV2D-24A0A075B6R9 120 aa14.24□□□□□ -0.13
ATG4D-212ENST00000590096 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.24□□□□□ -0.13
ATG4D-212ENST00000590096 IGKV2-29A2NJV5 120 aaPredicted RBP14.24□□□□□ -0.13
ATG4D-212ENST00000590096 NPYP01303 97 aa14.24□□□□□ -0.13
ATG4D-212ENST00000590096 AMMECR1LQ6DCA0 310 aa14.24□□□□□ -0.13
ATG4D-212ENST00000590096 RPL32P62910 135 aaKnown RBP14.23□□□□□ -0.13
ATG4D-212ENST00000590096 LINC00269Q8N2A0 174 aa14.23□□□□□ -0.13
ATG4D-212ENST00000590096 RNASEKQ6P5S7 137 aaKnown RBP14.22□□□□□ -0.13
ATG4D-212ENST00000590096 ENHOQ6UWT2 76 aa14.22□□□□□ -0.13
ATG4D-212ENST00000590096 SMIM2Q9BVW6 85 aa14.22□□□□□ -0.13
ATG4D-212ENST00000590096 C1orf43Q9BWL3 253 aa14.22□□□□□ -0.13
ATG4D-212ENST00000590096 LAMTOR2Q9Y2Q5 125 aa14.22□□□□□ -0.13
ATG4D-212ENST00000590096 IGLV4-60A0A075B6I1 120 aa14.21□□□□□ -0.13
ATG4D-212ENST00000590096 A0A087WTM6 91 aa14.21□□□□□ -0.13
ATG4D-212ENST00000590096 TCAPO15273 167 aa14.21□□□□□ -0.13
ATG4D-212ENST00000590096 ESDP10768 282 aa14.21□□□□□ -0.13
ATG4D-212ENST00000590096 MIAQ16674 131 aa14.21□□□□□ -0.13
ATG4D-212ENST00000590096 CLPSL2Q6UWE3 100 aa14.21□□□□□ -0.13
ATG4D-212ENST00000590096 SLC7A5P1Q8MH63 180 aa14.21□□□□□ -0.13
ATG4D-212ENST00000590096 C20orf203Q8NBC4 194 aa14.21□□□□□ -0.13
ATG4D-212ENST00000590096 DNAH11Q96DT5 4516 aa14.2□□□□□ -0.14
ATG4D-212ENST00000590096 HLA-DQA1P01909 254 aa14.2□□□□□ -0.14
ATG4D-212ENST00000590096 FGF6P10767 208 aa14.2□□□□□ -0.14
ATG4D-212ENST00000590096 COX19Q49B96 90 aa14.2□□□□□ -0.14
ATG4D-212ENST00000590096 PRR34Q9NV39 138 aa14.2□□□□□ -0.14
ATG4D-212ENST00000590096 REG3AQ06141 175 aa14.19□□□□□ -0.14
ATG4D-212ENST00000590096 SPATA12Q7Z6I5 190 aa14.19□□□□□ -0.14
ATG4D-212ENST00000590096 ZNF25P17030 456 aaPredicted RBP14.18□□□□□ -0.14
ATG4D-212ENST00000590096 TMEM101Q96IK0 257 aa14.18□□□□□ -0.14
ATG4D-212ENST00000590096 GNB1LQ9BYB4 327 aa14.18□□□□□ -0.14
ATG4D-212ENST00000590096 MAP1LC3AQ9H492 121 aa14.18□□□□□ -0.14
ATG4D-212ENST00000590096 SMAGPQ0VAQ4 97 aa14.17□□□□□ -0.14
ATG4D-212ENST00000590096 KIAA1109Q2LD37 5005 aa14.17□□□□□ -0.14
ATG4D-212ENST00000590096 LRCOL1A6NCL2 159 aa14.16□□□□□ -0.14
ATG4D-212ENST00000590096 TMEM18Q96B42 140 aa14.16□□□□□ -0.14
ATG4D-212ENST00000590096 LOC389332A0A1B0GUA5 103 aa14.15□□□□□ -0.14
ATG4D-212ENST00000590096 MT-ND6P03923 174 aa14.15□□□□□ -0.14
ATG4D-212ENST00000590096 OR5A1Q8NGJ0 315 aa14.15□□□□□ -0.14
ATG4D-212ENST00000590096 PKHD1P08F94 4074 aa14.14□□□□□ -0.15
ATG4D-212ENST00000590096 TRAV8-4A0A0B4J246 113 aa14.14□□□□□ -0.15
ATG4D-212ENST00000590096 PRSS47A8MTI9 375 aa14.14□□□□□ -0.15
ATG4D-212ENST00000590096 RAB5AP20339 215 aa14.14□□□□□ -0.15
ATG4D-212ENST00000590096 KIAA1644Q3SXP7 199 aa14.14□□□□□ -0.15
ATG4D-212ENST00000590096 MRPL52Q86TS9 123 aaKnown RBP14.14□□□□□ -0.15
ATG4D-212ENST00000590096 TGIF2-C20orf24A0A0A6YYL0 155 aa14.13□□□□□ -0.15
ATG4D-212ENST00000590096 KRTAP10-2P60368 255 aa14.13□□□□□ -0.15
ATG4D-212ENST00000590096 DGAT2L7PQ6IED9 249 aa14.13□□□□□ -0.15
ATG4D-212ENST00000590096 IGLV10-54A0A075B6I4 117 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms