RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 IGLV4-60A0A075B6I1 120 aa4.82□□□□□ -1.64
GPATCH8-206ENST00000588554 PFDN1O60925 122 aa4.82□□□□□ -1.64
GPATCH8-206ENST00000588554 S100A9P06702 114 aaKnown RBP4.82□□□□□ -1.64
GPATCH8-206ENST00000588554 IGLC6P0CF74 106 aa4.82□□□□□ -1.64
GPATCH8-206ENST00000588554 NKX2-5P52952 324 aaPredicted RBP4.82□□□□□ -1.64
GPATCH8-206ENST00000588554 REG3AQ06141 175 aa4.82□□□□□ -1.64
GPATCH8-206ENST00000588554 MIAQ16674 131 aa4.82□□□□□ -1.64
GPATCH8-206ENST00000588554 C14orf177Q52M58 125 aa4.82□□□□□ -1.64
GPATCH8-206ENST00000588554 SUMO4Q6EEV6 95 aa4.82□□□□□ -1.64
GPATCH8-206ENST00000588554 C9orf163Q8N9P6 203 aa4.82□□□□□ -1.64
GPATCH8-206ENST00000588554 C20orf203Q8NBC4 194 aa4.82□□□□□ -1.64
GPATCH8-206ENST00000588554 GNG13Q9P2W3 67 aa4.82□□□□□ -1.64
GPATCH8-206ENST00000588554 TRBV25-1A0A075B6N4 114 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 C19orf71A6NCJ1 209 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 UMAD1C9J7I0 102 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 BCL2L11O43521 198 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 OXTP01178 125 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 CXCL1P09341 107 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 CHTF8P0CG12 524 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 SMIM17P0DL12 118 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 ZNF345Q14585 488 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 CENPWQ5EE01 88 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 SERTAD4-AS1Q5TG53 156 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 DGAT2L7PQ6IED9 249 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 OR2D3Q8NGH3 330 aa4.81□□□□□ -1.64
GPATCH8-206ENST00000588554 TRBV20OR9-2A0A075B6H5 130 aa4.8□□□□□ -1.64
GPATCH8-206ENST00000588554 IGHV1-24A0A0C4DH33 117 aa4.8□□□□□ -1.64
GPATCH8-206ENST00000588554 hDV102S1A0JD36 115 aa4.8□□□□□ -1.64
GPATCH8-206ENST00000588554 HMSDA8MTL9 139 aa4.8□□□□□ -1.64
GPATCH8-206ENST00000588554 IQCJQ1A5X6 159 aa4.8□□□□□ -1.64
GPATCH8-206ENST00000588554 LYZL1Q6UWQ5 148 aa4.8□□□□□ -1.64
GPATCH8-206ENST00000588554 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.8□□□□□ -1.64
GPATCH8-206ENST00000588554 FER1L6-AS1Q8NA97 138 aa4.8□□□□□ -1.64
GPATCH8-206ENST00000588554 DPH3Q96FX2 82 aa4.8□□□□□ -1.64
GPATCH8-206ENST00000588554 AP1S3Q96PC3 154 aa4.8□□□□□ -1.64
GPATCH8-206ENST00000588554 TRAV26-2A0A0B4J265 109 aa4.79□□□□□ -1.64
GPATCH8-206ENST00000588554 IGKV3OR2-268A0A0C4DH90 116 aa4.79□□□□□ -1.64
GPATCH8-206ENST00000588554 A0A0D9SG52 128 aa4.79□□□□□ -1.64
GPATCH8-206ENST00000588554 KANTRA0A1W2PQU2 76 aa4.79□□□□□ -1.64
GPATCH8-206ENST00000588554 MT1HL1P0DM35 61 aa4.79□□□□□ -1.64
GPATCH8-206ENST00000588554 NTF3P20783 257 aa4.79□□□□□ -1.64
GPATCH8-206ENST00000588554 FOXA3P55318 350 aaPredicted RBP4.79□□□□□ -1.64
GPATCH8-206ENST00000588554 ODF1Q14990 250 aa4.79□□□□□ -1.64
GPATCH8-206ENST00000588554 C11orf52Q96A22 123 aa4.79□□□□□ -1.64
GPATCH8-206ENST00000588554 A0A087WYN8 130 aa4.78□□□□□ -1.64
GPATCH8-206ENST00000588554 GNG4P50150 75 aa4.78□□□□□ -1.64
GPATCH8-206ENST00000588554 TMEM97Q5BJF2 176 aa4.78□□□□□ -1.64
GPATCH8-206ENST00000588554 RASL11AQ6T310 242 aa4.78□□□□□ -1.64
GPATCH8-206ENST00000588554 TMEM243Q9BU79 118 aa4.78□□□□□ -1.64
GPATCH8-206ENST00000588554 NIT2Q9NQR4 276 aa4.78□□□□□ -1.64
GPATCH8-206ENST00000588554 MED9Q9NWA0 146 aa4.78□□□□□ -1.64
GPATCH8-206ENST00000588554 TRAV1-1A0A0B4J248 108 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 H7C1H1 209 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 IFNA1P01562 189 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 P01737 135 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 AMTP48728 403 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 RPS20P60866 119 aaKnown RBP4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 PKIAP61925 76 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 CNBPP62633 177 aaKnown RBP4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 CACNG7P62955 275 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 CIRBPQ14011 172 aaKnown RBP4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 HIGD2BQ4VC39 106 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 C9orf62Q8N4C0 152 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 C15orf56Q8N910 161 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 GATD1Q8NB37 220 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 RPL39LQ96EH5 51 aaKnown RBP4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 RNASE7Q9H1E1 156 aaKnown RBP4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 MANBALQ9NQG1 85 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 FAT3Q8TDW7 4589 aa4.77□□□□□ -1.65
GPATCH8-206ENST00000588554 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 A0A1B0GUV1 79 aa4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 IGKV2-29A2NJV5 120 aaPredicted RBP4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 F2Z2F3 143 aa4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 K7EN84 100 aa4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 GAS8-AS1O95177 125 aa4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 SULT1A2P50226 295 aa4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 MEF2BQ02080 365 aaPredicted RBP4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 COX6A2Q02221 97 aa4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 TWIST1Q15672 202 aa4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 PRSS3P2Q8NHM4 247 aa4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 OCC1Q8TAD7 63 aa4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 DPH3P1Q9H4G8 78 aa4.76□□□□□ -1.65
GPATCH8-206ENST00000588554 IGHV3-64A0A075B6Q5 118 aa4.75□□□□□ -1.65
GPATCH8-206ENST00000588554 TRAV8-4A0A0B4J246 113 aa4.75□□□□□ -1.65
GPATCH8-206ENST00000588554 PHOX2AO14813 284 aa4.75□□□□□ -1.65
GPATCH8-206ENST00000588554 UBE2L6O14933 153 aa4.75□□□□□ -1.65
GPATCH8-206ENST00000588554 EIF5AP63241 154 aaKnown RBP4.75□□□□□ -1.65
GPATCH8-206ENST00000588554 COTL1Q14019 142 aa4.75□□□□□ -1.65
GPATCH8-206ENST00000588554 LYPD6BQ8NI32 183 aa4.75□□□□□ -1.65
GPATCH8-206ENST00000588554 SPACA4Q8TDM5 124 aa4.75□□□□□ -1.65
GPATCH8-206ENST00000588554 GTSF1Q8WW33 167 aa4.75□□□□□ -1.65
GPATCH8-206ENST00000588554 LINC00526Q96FQ7 95 aa4.75□□□□□ -1.65
GPATCH8-206ENST00000588554 IGKV2-24A0A0C4DH68 120 aa4.74□□□□□ -1.65
GPATCH8-206ENST00000588554 PDE6DO43924 150 aa4.74□□□□□ -1.65
GPATCH8-206ENST00000588554 TRGC1P0CF51 173 aa4.74□□□□□ -1.65
GPATCH8-206ENST00000588554 BCL2P10415 239 aa4.74□□□□□ -1.65
GPATCH8-206ENST00000588554 CTRLP40313 264 aa4.74□□□□□ -1.65
GPATCH8-206ENST00000588554 CHCHD10Q8WYQ3 142 aaPredicted RBP4.74□□□□□ -1.65
GPATCH8-206ENST00000588554 PGLYRP4Q96LB8 373 aa4.74□□□□□ -1.65
GPATCH8-206ENST00000588554 RPP21Q9H633 154 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms