RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CTDSP1Q9GZU7 261 aa13.51□□□□□ -0.25
DDX39A-207ENST00000588542 ST20Q9HBF5 79 aa13.51□□□□□ -0.25
DDX39A-207ENST00000588542 DNAH5Q8TE73 4624 aa13.51□□□□□ -0.25
DDX39A-207ENST00000588542 PKIAP61925 76 aa13.5□□□□□ -0.25
DDX39A-207ENST00000588542 Q8N976 141 aa13.5□□□□□ -0.25
DDX39A-207ENST00000588542 TRAV8-3A0A0A6YYJ7 113 aa13.49□□□□□ -0.25
DDX39A-207ENST00000588542 AMTP48728 403 aa13.49□□□□□ -0.25
DDX39A-207ENST00000588542 RBX1P62877 108 aa13.49□□□□□ -0.25
DDX39A-207ENST00000588542 ELOBQ15370 118 aa13.49□□□□□ -0.25
DDX39A-207ENST00000588542 IMMP2LQ96T52 175 aa13.49□□□□□ -0.25
DDX39A-207ENST00000588542 I3L3M4 83 aa13.48□□□□□ -0.25
DDX39A-207ENST00000588542 PMCHP20382 165 aa13.48□□□□□ -0.25
DDX39A-207ENST00000588542 BTF3L4Q96K17 158 aa13.48□□□□□ -0.25
DDX39A-207ENST00000588542 TRBV27A0A0K0K1C4 114 aa13.47□□□□□ -0.25
DDX39A-207ENST00000588542 TSHBP01222 138 aa13.47□□□□□ -0.25
DDX39A-207ENST00000588542 ENHOQ6UWT2 76 aa13.47□□□□□ -0.25
DDX39A-207ENST00000588542 UBE2WQ96B02 151 aa13.47□□□□□ -0.25
DDX39A-207ENST00000588542 A0A087WTM6 91 aa13.46□□□□□ -0.25
DDX39A-207ENST00000588542 C7orf77A4D0Y5 90 aa13.46□□□□□ -0.25
DDX39A-207ENST00000588542 PPP1R17O96001 155 aa13.46□□□□□ -0.25
DDX39A-207ENST00000588542 ANGP03950 147 aaKnown RBP13.46□□□□□ -0.25
DDX39A-207ENST00000588542 CKS2P33552 79 aa13.46□□□□□ -0.25
DDX39A-207ENST00000588542 CLRN3Q8NCR9 226 aa13.46□□□□□ -0.25
DDX39A-207ENST00000588542 TRBV24-1A0A075B6N3 115 aa13.45□□□□□ -0.26
DDX39A-207ENST00000588542 A0A1B0GUV1 79 aa13.45□□□□□ -0.26
DDX39A-207ENST00000588542 D6R8Y8 96 aa13.45□□□□□ -0.26
DDX39A-207ENST00000588542 APCSP02743 223 aa13.45□□□□□ -0.26
DDX39A-207ENST00000588542 SUMO2P61956 95 aaKnown RBP13.45□□□□□ -0.26
DDX39A-207ENST00000588542 TMEM242Q9NWH2 141 aa13.45□□□□□ -0.26
DDX39A-207ENST00000588542 IGLV4-60A0A075B6I1 120 aa13.44□□□□□ -0.26
DDX39A-207ENST00000588542 LRCOL1A6NCL2 159 aa13.44□□□□□ -0.26
DDX39A-207ENST00000588542 PSCAO43653 123 aa13.44□□□□□ -0.26
DDX39A-207ENST00000588542 KRTAP10-2P60368 255 aa13.44□□□□□ -0.26
DDX39A-207ENST00000588542 C20orf203Q8NBC4 194 aa13.44□□□□□ -0.26
DDX39A-207ENST00000588542 TM2D2Q9BX73 214 aa13.44□□□□□ -0.26
DDX39A-207ENST00000588542 PRR34Q9NV39 138 aa13.44□□□□□ -0.26
DDX39A-207ENST00000588542 VCYO14598 125 aa13.43□□□□□ -0.26
DDX39A-207ENST00000588542 UBE2L6O14933 153 aa13.43□□□□□ -0.26
DDX39A-207ENST00000588542 TNFRSF6BO95407 300 aa13.43□□□□□ -0.26
DDX39A-207ENST00000588542 ESDP10768 282 aa13.43□□□□□ -0.26
DDX39A-207ENST00000588542 Q0VG73 95 aa13.43□□□□□ -0.26
DDX39A-207ENST00000588542 RHEBQ15382 184 aa13.43□□□□□ -0.26
DDX39A-207ENST00000588542 SPATA12Q7Z6I5 190 aa13.43□□□□□ -0.26
DDX39A-207ENST00000588542 MAPKAPK5-AS1Q8N8E1 139 aa13.43□□□□□ -0.26
DDX39A-207ENST00000588542 C20orf78Q9BR46 151 aa13.43□□□□□ -0.26
DDX39A-207ENST00000588542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.42□□□□□ -0.26
DDX39A-207ENST00000588542 IGKV2-29A2NJV5 120 aaPredicted RBP13.42□□□□□ -0.26
DDX39A-207ENST00000588542 PPBPP02775 128 aa13.42□□□□□ -0.26
DDX39A-207ENST00000588542 LINC00269Q8N2A0 174 aa13.42□□□□□ -0.26
DDX39A-207ENST00000588542 LRP1BQ9NZR2 4599 aa13.42□□□□□ -0.26
DDX39A-207ENST00000588542 TRAV9-1A0A075B6T8 112 aa13.41□□□□□ -0.26
DDX39A-207ENST00000588542 NPYP01303 97 aa13.41□□□□□ -0.26
DDX39A-207ENST00000588542 RPL32P62910 135 aaKnown RBP13.41□□□□□ -0.26
DDX39A-207ENST00000588542 RPS10P5Q9NQ39 176 aa13.41□□□□□ -0.26
DDX39A-207ENST00000588542 IGKV2D-24A0A075B6R9 120 aa13.4□□□□□ -0.26
DDX39A-207ENST00000588542 H7C423 109 aa13.4□□□□□ -0.26
DDX39A-207ENST00000588542 PHOX2AO14813 284 aa13.4□□□□□ -0.26
DDX39A-207ENST00000588542 APOC3P02656 99 aa13.4□□□□□ -0.26
DDX39A-207ENST00000588542 CRPP02741 224 aa13.4□□□□□ -0.26
DDX39A-207ENST00000588542 CLPSL2Q6UWE3 100 aa13.4□□□□□ -0.26
DDX39A-207ENST00000588542 TMEM136Q6ZRR5 245 aa13.4□□□□□ -0.26
DDX39A-207ENST00000588542 ORMDL3Q8N138 153 aa13.4□□□□□ -0.26
DDX39A-207ENST00000588542 RMI2Q96E14 147 aa13.4□□□□□ -0.26
DDX39A-207ENST00000588542 COX11Q9Y6N1 276 aa13.4□□□□□ -0.26
DDX39A-207ENST00000588542 EREGO14944 169 aa13.39□□□□□ -0.27
DDX39A-207ENST00000588542 WFDC2Q14508 124 aa13.39□□□□□ -0.27
DDX39A-207ENST00000588542 MIAQ16674 131 aa13.39□□□□□ -0.27
DDX39A-207ENST00000588542 PRELID3AQ96N28 172 aa13.39□□□□□ -0.27
DDX39A-207ENST00000588542 FGF6P10767 208 aa13.38□□□□□ -0.27
DDX39A-207ENST00000588542 S100PP25815 95 aa13.38□□□□□ -0.27
DDX39A-207ENST00000588542 SMIM2Q9BVW6 85 aa13.38□□□□□ -0.27
DDX39A-207ENST00000588542 FUSP35637 526 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDX39A-207ENST00000588542 REG3AQ06141 175 aa13.37□□□□□ -0.27
DDX39A-207ENST00000588542 KIR2DL4Q99706 377 aa13.37□□□□□ -0.27
DDX39A-207ENST00000588542 C1orf43Q9BWL3 253 aa13.37□□□□□ -0.27
DDX39A-207ENST00000588542 FCER1GP30273 86 aa13.36□□□□□ -0.27
DDX39A-207ENST00000588542 AMMECR1LQ6DCA0 310 aa13.36□□□□□ -0.27
DDX39A-207ENST00000588542 KRTAP26-1Q6PEX3 210 aa13.36□□□□□ -0.27
DDX39A-207ENST00000588542 SVBPQ8N300 66 aa13.36□□□□□ -0.27
DDX39A-207ENST00000588542 C16orf90A8MZG2 172 aa13.35□□□□□ -0.27
DDX39A-207ENST00000588542 NDUFA5Q16718 116 aa13.35□□□□□ -0.27
DDX39A-207ENST00000588542 RNASEKQ6P5S7 137 aaKnown RBP13.35□□□□□ -0.27
DDX39A-207ENST00000588542 BAALCQ8WXS3 180 aa13.35□□□□□ -0.27
DDX39A-207ENST00000588542 KIAA1109Q2LD37 5005 aa13.34□□□□□ -0.27
DDX39A-207ENST00000588542 PRSS47A8MTI9 375 aa13.34□□□□□ -0.27
DDX39A-207ENST00000588542 LECT2O14960 151 aa13.34□□□□□ -0.27
DDX39A-207ENST00000588542 SNAPINO95295 136 aa13.34□□□□□ -0.27
DDX39A-207ENST00000588542 ZNF25P17030 456 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-207ENST00000588542 MRPL52Q86TS9 123 aaKnown RBP13.34□□□□□ -0.27
DDX39A-207ENST00000588542 SLC7A5P1Q8MH63 180 aa13.34□□□□□ -0.27
DDX39A-207ENST00000588542 Q8N814 137 aa13.34□□□□□ -0.27
DDX39A-207ENST00000588542 PGPEP1Q9NXJ5 209 aa13.34□□□□□ -0.27
DDX39A-207ENST00000588542 LAMTOR2Q9Y2Q5 125 aa13.34□□□□□ -0.27
DDX39A-207ENST00000588542 IGLV10-54A0A075B6I4 117 aa13.32□□□□□ -0.28
DDX39A-207ENST00000588542 GNB1LQ9BYB4 327 aa13.32□□□□□ -0.28
DDX39A-207ENST00000588542 TRAV8-4A0A0B4J246 113 aa13.31□□□□□ -0.28
DDX39A-207ENST00000588542 TCAPO15273 167 aa13.31□□□□□ -0.28
DDX39A-207ENST00000588542 HLA-DQA1P01909 254 aa13.31□□□□□ -0.28
DDX39A-207ENST00000588542 CDPF1Q6NVV7 123 aa13.31□□□□□ -0.28
DDX39A-207ENST00000588542 KIAA1644Q3SXP7 199 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms